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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2298837..2299830+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007258-T1 ID=CBS51388_007258-T1|Name=CBS51388_007258-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=994bp|location=Sequence derived from alignment at An11:2298837..2299830+ (Aspergillus niger CBS 513.88)
ATGAGTCTCTGTGGCCGTCAAAAGGTCGTTCGACGCAAGATGGTGCTATT
GTCAGTTTAACCAAGCCTTGGCAGTTACATTTGATGGGCAGAATACTGAT
TCCAGATAAGAGGGGACGGCGCTTGCGGCAAGACCTCCGCTCTGAATGTC
TTCACCAGAGGGTGGGCACCCCTTGTATTTTCCCTTGTGGCCAAGACCGC
TAACTTTCTGGTAGATACTTTCCTACGGTCTAGTGAGGATGACCTTTCTG
AACGCTAATTTCACGTTGCGATATTAATCTTTCCCACCTACATAGTGAGC
CTACTGTATTCGGTGCGCATGCTCTTCCTTAGTCTATGATGATGATTATC
TTGCTGACCGTTTTGCTTCCCAGAAAACTACGTGCATGGTAATTCCTCCT
TCTTACAAAGACCGGGCTCGCATGCTTACGTTCGCTCAAGATATCTTCGT
GGACAATGTACACATGGAATTGTCGCTATGGGATACGGCCGGCCAGGAAG
AATTTGACCGACTGCGCGCGCTATCTTATGAGGACACACACGTGATTATG
CTTTGTTTCAGCGTGAGAATTCCCGCTCCTCGAGGTCTGGACCAGAGGTT
GACTCCTACTAGGTTGACAGTCGCGATTCGTTCGAGAACGTGGCGAGCAA
ATGGATAGAAGAGATCTCGGAGAACTGCGCCGGCGTCAAATTGGTGCTCA
CTGCCCTCAAGTGTGATTTGAGGAAGGACGAGTTCCTCAACGACAACCCG
AACGCGATCACCTACGAAGAAGGACTGGCGAAAGCCAAGGAAATTGGTGC
CGTGAAATACCTGGGTAAGGACGACTCCTATCCCCGTGATGTCATTCGTG
TAATGATTCCTGACAACCCTGGCAGAGTGCTCCGCCGTGCAAAATCGTGG
TATCATGGAAACATTCTACGAAGCTGCAAAGGTCGCCCTGGAAGTCAAAA
CTCAGGGCTCGAATGGATCCGGCGAACGGTGTGTCATTCTGTAG back to topCoding sequence (CDS) from alignment at An11:2298837..2299830+ >CBS51388_007258-T1 ID=CBS51388_007258-T1|Name=CBS51388_007258-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3120bp|location=Sequence derived from alignment at An11:2298837..2299830+ (Aspergillus niger CBS 513.88)
ATGAGTCTCTGTGGCCGTCAAAAGGTCGTTCGACGCAAGATGGTGCTATT
GTCAATAAGAGGGGACGGCGCTTGCGGCAAGACCTCCGCTCTGAATGTCT
TCACCAGAGGGTGGGCACCCCTTGTATTTTCCCTTGTGGCCAAGACCGCT
AACTTTCTGGTAGATACTTTCCTACGGTCTAATATCTTCGTGGACAATGT
ACACATGGAATTGTCGCTATGGGATACGGCCGGCCAGGAAGAATTTGACC
GACTGCGCGCGCTATCTTATGAGGACACACACGTGATTATGCTTTGTTTC
AGCGTTGACAGTCGCGATTCGTTCGAGAACGTGGCGAGCAAATGGATAGA
AGAGATCTCGGAGAACTGCGCCGGCGTCAAATTGGTGCTCACTGCCCTCA
AGTGTGATTTGAGGAAGGACGAGTTCCTCAACGACAACCCGAACGCGATC
ACCTACGAAGAAGGACTGGCGAAAGCCAAGGAAATTGGTGCCGTGAAATA
CCTGGAGTGCTCCGCCGTGCAAAATCGTGGTATCATGGAAACATTCTACG
AAGCTGCAAAGGTCGCCCTGGAAGTCAAAACTCAGGGCTCGAATGGATCC
GGCGAACGGTGTGTCATTCTGTAGATGAGTCTCTGTGGCCGTCAAAAGGT
CGTTCGACGCAAGATGGTGCTATTGTCAATAAGAGGGGACGGCGCTTGCG
GCAAGACCTCCGCTCTGAATGTCTTCACCAGAGGGTGGGCACCCCTTGTA
TTTTCCCTTGTGGCCAAGACCGCTAACTTTCTGGTAGATACTTTCCTACG
GTCTAATATCTTCGTGGACAATGTACACATGGAATTGTCGCTATGGGATA
CGGCCGGCCAGGAAGAATTTGACCGACTGCGCGCGCTATCTTATGAGGAC
ACACACGTGATTATGCTTTGTTTCAGCGTTGACAGTCGCGATTCGTTCGA
GAACGTGGCGAGCAAATGGATAGAAGAGATCTCGGAGAACTGCGCCGGCG
TCAAATTGGTGCTCACTGCCCTCAAGTGTGATTTGAGGAAGGACGAGTTC
CTCAACGACAACCCGAACGCGATCACCTACGAAGAAGGACTGGCGAAAGC
CAAGGAAATTGGTGCCGTGAAATACCTGGAGTGCTCCGCCGTGCAAAATC
GTGGTATCATGGAAACATTCTACGAAGCTGCAAAGGTCGCCCTGGAAGTC
AAAACTCAGGGCTCGAATGGATCCGGCGAACGGTGTGTCATTCTGTAGAT
GAGTCTCTGTGGCCGTCAAAAGGTCGTTCGACGCAAGATGGTGCTATTGT
CAATAAGAGGGGACGGCGCTTGCGGCAAGACCTCCGCTCTGAATGTCTTC
ACCAGAGGGTGGGCACCCCTTGTATTTTCCCTTGTGGCCAAGACCGCTAA
CTTTCTGGTAGATACTTTCCTACGGTCTAATATCTTCGTGGACAATGTAC
ACATGGAATTGTCGCTATGGGATACGGCCGGCCAGGAAGAATTTGACCGA
CTGCGCGCGCTATCTTATGAGGACACACACGTGATTATGCTTTGTTTCAG
CGTTGACAGTCGCGATTCGTTCGAGAACGTGGCGAGCAAATGGATAGAAG
AGATCTCGGAGAACTGCGCCGGCGTCAAATTGGTGCTCACTGCCCTCAAG
TGTGATTTGAGGAAGGACGAGTTCCTCAACGACAACCCGAACGCGATCAC
CTACGAAGAAGGACTGGCGAAAGCCAAGGAAATTGGTGCCGTGAAATACC
TGGAGTGCTCCGCCGTGCAAAATCGTGGTATCATGGAAACATTCTACGAA
GCTGCAAAGGTCGCCCTGGAAGTCAAAACTCAGGGCTCGAATGGATCCGG
CGAACGGTGTGTCATTCTGTAGATGAGTCTCTGTGGCCGTCAAAAGGTCG
TTCGACGCAAGATGGTGCTATTGTCAATAAGAGGGGACGGCGCTTGCGGC
AAGACCTCCGCTCTGAATGTCTTCACCAGAGGGTGGGCACCCCTTGTATT
TTCCCTTGTGGCCAAGACCGCTAACTTTCTGGTAGATACTTTCCTACGGT
CTAATATCTTCGTGGACAATGTACACATGGAATTGTCGCTATGGGATACG
GCCGGCCAGGAAGAATTTGACCGACTGCGCGCGCTATCTTATGAGGACAC
ACACGTGATTATGCTTTGTTTCAGCGTTGACAGTCGCGATTCGTTCGAGA
ACGTGGCGAGCAAATGGATAGAAGAGATCTCGGAGAACTGCGCCGGCGTC
AAATTGGTGCTCACTGCCCTCAAGTGTGATTTGAGGAAGGACGAGTTCCT
CAACGACAACCCGAACGCGATCACCTACGAAGAAGGACTGGCGAAAGCCA
AGGAAATTGGTGCCGTGAAATACCTGGAGTGCTCCGCCGTGCAAAATCGT
GGTATCATGGAAACATTCTACGAAGCTGCAAAGGTCGCCCTGGAAGTCAA
AACTCAGGGCTCGAATGGATCCGGCGAACGGTGTGTCATTCTGTAGATGA
GTCTCTGTGGCCGTCAAAAGGTCGTTCGACGCAAGATGGTGCTATTGTCA
ATAAGAGGGGACGGCGCTTGCGGCAAGACCTCCGCTCTGAATGTCTTCAC
CAGAGGGTGGGCACCCCTTGTATTTTCCCTTGTGGCCAAGACCGCTAACT
TTCTGGTAGATACTTTCCTACGGTCTAATATCTTCGTGGACAATGTACAC
ATGGAATTGTCGCTATGGGATACGGCCGGCCAGGAAGAATTTGACCGACT
GCGCGCGCTATCTTATGAGGACACACACGTGATTATGCTTTGTTTCAGCG
TTGACAGTCGCGATTCGTTCGAGAACGTGGCGAGCAAATGGATAGAAGAG
ATCTCGGAGAACTGCGCCGGCGTCAAATTGGTGCTCACTGCCCTCAAGTG
TGATTTGAGGAAGGACGAGTTCCTCAACGACAACCCGAACGCGATCACCT
ACGAAGAAGGACTGGCGAAAGCCAAGGAAATTGGTGCCGTGAAATACCTG
GAGTGCTCCGCCGTGCAAAATCGTGGTATCATGGAAACATTCTACGAAGC
TGCAAAGGTCGCCCTGGAAGTCAAAACTCAGGGCTCGAATGGATCCGGCG
AACGGTGTGTCATTCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007264 | small GTPase mediated signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.14 |
| Note | BUSCO:EOG09264YNR |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR003578 |
| DBxref | InterPro:IPR005225 |
| DBxref | InterPro:IPR001806 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF00025 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2298837..2299830 + |
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