|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2308863..2309389+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007263-T1 ID=CBS51388_007263-T1|Name=CBS51388_007263-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=527bp|location=Sequence derived from alignment at An11:2308863..2309389+ (Aspergillus niger CBS 513.88)
ATGGTACGTTCTACCCCTTCGATGCCATCCCACAACCTGCCCGACATATC
TCCCTGCATGTTTGCATAGAAATGGCTGTCGCCGCTAGCCATCAGTGCAC
CCCGTCGTCGCCACCATCCCGTCGCCGCAGGCATCTCGAAATTTTCATCG
AAAGGAAAGGAAGAATGTTGAACTGACGGATATCCCTTCGAAATAGGTTC
TCGCGGTCGACCTCCTCAACCCCGCGCCTCAGGCTGAGGCCCGCAAGCAC
AAGCTCAAGGTATGAACAATCCGTATCGGGAAAAAAGTGATAGATAAGAA
AGGGAAGGGAATGGGTTGGCTGATATCGGTTATTACTTCGACAGACCCTT
GTGCCTGCTCCCCGCTCCTTCTTCATGGACGTCAAGTGCCCCGGCTGCTT
CACCATCACCACCGTCTTCTCCCACGCCCAGACCGTCGTCGTCTGCGCTG
GTTGCTCGACCGTTCTGTGCCAGCCCACCGGTGGTAAGGCCCGTCTCACT
GAGGGCTGCTCTTTCCGCCGCAAGTAA back to topCoding sequence (CDS) from alignment at An11:2308863..2309389+ >CBS51388_007263-T1 ID=CBS51388_007263-T1|Name=CBS51388_007263-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=747bp|location=Sequence derived from alignment at An11:2308863..2309389+ (Aspergillus niger CBS 513.88)
ATGGTTCTCGCGGTCGACCTCCTCAACCCCGCGCCTCAGGCTGAGGCCCG
CAAGCACAAGCTCAAGACCCTTGTGCCTGCTCCCCGCTCCTTCTTCATGG
ACGTCAAGTGCCCCGGCTGCTTCACCATCACCACCGTCTTCTCCCACGCC
CAGACCGTCGTCGTCTGCGCTGGTTGCTCGACCGTTCTGTGCCAGCCCAC
CGGTGGTAAGGCCCGTCTCACTGAGGGCTGCTCTTTCCGCCGCAAGTAAA
TGGTTCTCGCGGTCGACCTCCTCAACCCCGCGCCTCAGGCTGAGGCCCGC
AAGCACAAGCTCAAGACCCTTGTGCCTGCTCCCCGCTCCTTCTTCATGGA
CGTCAAGTGCCCCGGCTGCTTCACCATCACCACCGTCTTCTCCCACGCCC
AGACCGTCGTCGTCTGCGCTGGTTGCTCGACCGTTCTGTGCCAGCCCACC
GGTGGTAAGGCCCGTCTCACTGAGGGCTGCTCTTTCCGCCGCAAGTAAAT
GGTTCTCGCGGTCGACCTCCTCAACCCCGCGCCTCAGGCTGAGGCCCGCA
AGCACAAGCTCAAGACCCTTGTGCCTGCTCCCCGCTCCTTCTTCATGGAC
GTCAAGTGCCCCGGCTGCTTCACCATCACCACCGTCTTCTCCCACGCCCA
GACCGTCGTCGTCTGCGCTGGTTGCTCGACCGTTCTGTGCCAGCCCACCG
GTGGTAAGGCCCGTCTCACTGAGGGCTGCTCTTTCCGCCGCAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.14 |
| DBxref | InterPro:IPR011332 |
| DBxref | InterPro:IPR000592 |
| DBxref | PFAM:PF01667 |
| Product | 40S ribosomal protein S27 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2308863..2309389 + |
|
