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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2328346..2329137+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007270-T1 ID=CBS51388_007270-T1|Name=CBS51388_007270-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=792bp|location=Sequence derived from alignment at An11:2328346..2329137+ (Aspergillus niger CBS 513.88)
ATGGCTACACCACAAACTGACGCCGAATGGGCGACGCTGATCTCCAGCAT
CCAACAGTCCCTCCCAACGAACTTCCCTTCATATGACGTTTCGTCTGAAA
TCAATCGCACCATAGACCATACTCAGCTAGCGTTGACAGCGACAGAGCAA
CAGATCGATGATCTGTGTCAAGAAGCCATCCAGCACCGATTCGCGACGGT
CTGCGTCCGACTGAACCATGTGTCTCGAGCAGTCCAGAACCTGCAAGAAC
ACCCGGCTGTCGGCGTAGCCTGTGTTGTTGGGTTTCACGAGGGAACTTAT
AAGACAGACGAGAAGACAGCTGAGGTGAAAGAGGCAGTGAGTCTAGGAGC
GTCTGAGCTCGACATGGTCCTTAATTACCCTCTTCTACAAGCGGGGAAGT
ACATGGATGTCTACACGGACGTGCTAGAAGTGCGCAAAGCAGCCCCGGCA
CCAGTTGGATTGAAGGTTATCTTGGAAACCTCCCAGTTGAGCCGCGAGCA
GATCATAGCGGGTTCGGTGCTGGCGTGTGTAGCTGGAGCAGATTATATCA
AGACTAGTACTGGATTCAACGGACCCGGGGCGAGCCTGGAGAACGTAACT
CTTATGCGAGCGACGGCAAATCTGGTTGGCAAGGGCACCAAGGTCAAGGC
CAGTGGTGGCGTACGTTCGGCAGAGGATTGTCGCAAGATGTTGCAAGCAG
GAGCGGCGCGTATTGGGAGCAGTTCCGGAGTGAAGATCATGCAGGAGGAG
AAGACGGGAGTTGCAAGTAGTGTCAGTAGTAGTGGTTATTAG back to topCoding sequence (CDS) from alignment at An11:2328346..2329137+ >CBS51388_007270-T1 ID=CBS51388_007270-T1|Name=CBS51388_007270-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=792bp|location=Sequence derived from alignment at An11:2328346..2329137+ (Aspergillus niger CBS 513.88)
ATGGCTACACCACAAACTGACGCCGAATGGGCGACGCTGATCTCCAGCAT
CCAACAGTCCCTCCCAACGAACTTCCCTTCATATGACGTTTCGTCTGAAA
TCAATCGCACCATAGACCATACTCAGCTAGCGTTGACAGCGACAGAGCAA
CAGATCGATGATCTGTGTCAAGAAGCCATCCAGCACCGATTCGCGACGGT
CTGCGTCCGACTGAACCATGTGTCTCGAGCAGTCCAGAACCTGCAAGAAC
ACCCGGCTGTCGGCGTAGCCTGTGTTGTTGGGTTTCACGAGGGAACTTAT
AAGACAGACGAGAAGACAGCTGAGGTGAAAGAGGCAGTGAGTCTAGGAGC
GTCTGAGCTCGACATGGTCCTTAATTACCCTCTTCTACAAGCGGGGAAGT
ACATGGATGTCTACACGGACGTGCTAGAAGTGCGCAAAGCAGCCCCGGCA
CCAGTTGGATTGAAGGTTATCTTGGAAACCTCCCAGTTGAGCCGCGAGCA
GATCATAGCGGGTTCGGTGCTGGCGTGTGTAGCTGGAGCAGATTATATCA
AGACTAGTACTGGATTCAACGGACCCGGGGCGAGCCTGGAGAACGTAACT
CTTATGCGAGCGACGGCAAATCTGGTTGGCAAGGGCACCAAGGTCAAGGC
CAGTGGTGGCGTACGTTCGGCAGAGGATTGTCGCAAGATGTTGCAAGCAG
GAGCGGCGCGTATTGGGAGCAGTTCCGGAGTGAAGATCATGCAGGAGGAG
AAGACGGGAGTTGCAAGTAGTGTCAGTAGTAGTGGTTATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009264 | deoxyribonucleotide catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004139 | deoxyribose-phosphate aldolase activity |
| GO:0003824 | catalytic activity |
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.14 |
| DBxref | InterPro:IPR028581 |
| DBxref | InterPro:IPR011343 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR002915 |
| DBxref | PFAM:PF01791 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2328346..2329137 + |
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