You are here

Home

CBS51388_007271-T1, CBS51388_007271-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007271-T1
Unique NameCBS51388_007271-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2329468..2330889+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007271-T1 ID=CBS51388_007271-T1|Name=CBS51388_007271-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1422bp|location=Sequence derived from alignment at An11:2329468..2330889+ (Aspergillus niger CBS 513.88)
ATGCGCCGTCCCAACTATAAGGTATGTCGATGACAGCTTGTACCTCCTTG
TAATAGCAGTCGGCATCTGAAGTGAGAAAAATGTGGTACATAGAGACGCA
AGACTACCCACGAAGATAGTCCTCCTTCGCACCACAATGGCACAACCGAT
CCCCTGTTCACCGAGAAGCCCTCAGCCGTCTTCACCCCCAAGGGTGGCCG
ATCGCATACACTCAGCGTTGCCATTCCGGGCAGCATCATAGACAAGTAAA
CCCCCTTTGACAAATGATTCCCAAGGGCTGCTGGTGTATATGGCCGCTAA
CAGATGCTGCGCAGCGCTCATTCCGTCGAGCAAAAGACCTTCCTAGCCGG
TGTAATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAGTTGTGGTGT
TTGACGATAATGAATATGGCGCCCATTGTGATTATTATGACCATAGAGTC
TCCTATGACTCACCCATTGCCAAAACTAGAGACCAAGTTGATGGCGATAC
ATCCTCTCCAAAAGCATATACCGCGAATTCAGACCCCTCGCACTTCCTGA
CTCACGTCCTGTCGTATCTTGAGACTCCACCATATTTGCGCAAGCATCTC
TTCCGCATCCATCCCAATCTTCGCACCGCTGGATTGCTGCCCAGCTTGGA
CATGCCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCCGTGAAGGCA
TTGTCGTTCCTAGTTCAGCGCGGAAAAGTAACCCGGCCAGCAAGATCACT
CAGATGAGCAAAGATCATCCTTTCCACCGTCGTAATAGCTCTACTAATAA
TGGCCCTGCCACAATTGTTGACACGGGTCTCTCACAGAAGATAGTTCTCC
CAAACATCCACCTCCCAGAACATGCCCGAGTCACTGTTCGATTTCTCCAG
CATGAGTTCCCCTATGCAGAACCCGTACACCCATCCACCCCTCGTGCCGA
AGCAGGTTATTACTGGGGCTACTATGTGCGACGATGTCGATCTCTCTCTT
CCGTTTTCACGGAATGTCCCTATGACGGTGGCTACGATCTGTCCTTCGGC
ACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCACA
ACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAAA
TATCGCCAGACTTCCAGCATATCCTTGTCGTCTTCGGTGGTGTCGCTGGG
ATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTGACATGGCCATCCG
CCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCCG
GACAGGGAAGCAGAACCATCCGCACTGAAGAAGCCGTTTGGATGGGGCTA
ACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCATA
CCGATGTGATCACGACGGTTAA
back to top

Coding sequence (CDS) from alignment at An11:2329468..2330889+

>CBS51388_007271-T1 ID=CBS51388_007271-T1|Name=CBS51388_007271-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3843bp|location=Sequence derived from alignment at An11:2329468..2330889+ (Aspergillus niger CBS 513.88)
ATGCGCCGTCCCAACTATAAGAGACGCAAGACTACCCACGAAGATAGTCC
TCCTTCGCACCACAATGGCACAACCGATCCCCTGTTCACCGAGAAGCCCT
CAGCCGTCTTCACCCCCAAGGGTGGCCGATCGCATACACTCAGCGTTGCC
ATTCCGGGCAGCATCATAGACAACGCTCATTCCGTCGAGCAAAAGACCTT
CCTAGCCGGTGTAATCGCACGCGCCCTTGCCGTATTCTGCGTCGATGAAG
TTGTGGTGTTTGACGATAATGAATATGGCGCCCATTGTGATTATTATGAC
CATAGAGTCTCCTATGACTCACCCATTGCCAAAACTAGAGACCAAGTTGA
TGGCGATACATCCTCTCCAAAAGCATATACCGCGAATTCAGACCCCTCGC
ACTTCCTGACTCACGTCCTGTCGTATCTTGAGACTCCACCATATTTGCGC
AAGCATCTCTTCCGCATCCATCCCAATCTTCGCACCGCTGGATTGCTGCC
CAGCTTGGACATGCCTCATCACTTGCGTGCCAACGAGTGGTGCGACTTCC
GTGAAGGCATTGTCGTTCCTAGTTCAGCGCGGAAAAGTAACCCGGCCAGC
AAGATCACTCAGATGAGCAAAGATCATCCTTTCCACCGTCGTAATAGCTC
TACTAATAATGGCCCTGCCACAATTGTTGACACGGGTCTCTCACAGAAGA
TAGTTCTCCCAAACATCCACCTCCCAGAACATGCCCGAGTCACTGTTCGA
TTTCTCCAGCATGAGTTCCCCTATGCAGAACCCGTACACCCATCCACCCC
TCGTGCCGAAGCAGGTTATTACTGGGGCTACTATGTGCGACGATGTCGAT
CTCTCTCTTCCGTTTTCACGGAATGTCCCTATGACGGTGGCTACGATCTG
TCCTTCGGCACGTCCGAGCGTGGTGTGCCTGTCTCCGCAGTGCTAGAGGA
GAAGCCACAACAAGCACATGATCGCTACAAGCAAGGCCACTCCTTTTGTC
GGGATCAAATATCGCCAGACTTCCAGCATATCCTTGTCGTCTTCGGTGGT
GTCGCTGGGATTGAGGCAGCCGTCCGGAACGATCCTCAACTCCGTGACAT
GGCCATCCGCCCATCCGATGCTGGCAAGCTCTTCGACTACTGGGTAAATT
TCCTACCCGGACAGGGAAGCAGAACCATCCGCACTGAAGAAGCCGTTTGG
ATGGGGCTAACGAGTCTCCAAGGCCTGCTTGATGGCACCCATCGGTTGAG
AAAGGCATACCGATGTGATCACGACGGTTAAATGCGCCGTCCCAACTATA
AGAGACGCAAGACTACCCACGAAGATAGTCCTCCTTCGCACCACAATGGC
ACAACCGATCCCCTGTTCACCGAGAAGCCCTCAGCCGTCTTCACCCCCAA
GGGTGGCCGATCGCATACACTCAGCGTTGCCATTCCGGGCAGCATCATAG
ACAACGCTCATTCCGTCGAGCAAAAGACCTTCCTAGCCGGTGTAATCGCA
CGCGCCCTTGCCGTATTCTGCGTCGATGAAGTTGTGGTGTTTGACGATAA
TGAATATGGCGCCCATTGTGATTATTATGACCATAGAGTCTCCTATGACT
CACCCATTGCCAAAACTAGAGACCAAGTTGATGGCGATACATCCTCTCCA
AAAGCATATACCGCGAATTCAGACCCCTCGCACTTCCTGACTCACGTCCT
GTCGTATCTTGAGACTCCACCATATTTGCGCAAGCATCTCTTCCGCATCC
ATCCCAATCTTCGCACCGCTGGATTGCTGCCCAGCTTGGACATGCCTCAT
CACTTGCGTGCCAACGAGTGGTGCGACTTCCGTGAAGGCATTGTCGTTCC
TAGTTCAGCGCGGAAAAGTAACCCGGCCAGCAAGATCACTCAGATGAGCA
AAGATCATCCTTTCCACCGTCGTAATAGCTCTACTAATAATGGCCCTGCC
ACAATTGTTGACACGGGTCTCTCACAGAAGATAGTTCTCCCAAACATCCA
CCTCCCAGAACATGCCCGAGTCACTGTTCGATTTCTCCAGCATGAGTTCC
CCTATGCAGAACCCGTACACCCATCCACCCCTCGTGCCGAAGCAGGTTAT
TACTGGGGCTACTATGTGCGACGATGTCGATCTCTCTCTTCCGTTTTCAC
GGAATGTCCCTATGACGGTGGCTACGATCTGTCCTTCGGCACGTCCGAGC
GTGGTGTGCCTGTCTCCGCAGTGCTAGAGGAGAAGCCACAACAAGCACAT
GATCGCTACAAGCAAGGCCACTCCTTTTGTCGGGATCAAATATCGCCAGA
CTTCCAGCATATCCTTGTCGTCTTCGGTGGTGTCGCTGGGATTGAGGCAG
CCGTCCGGAACGATCCTCAACTCCGTGACATGGCCATCCGCCCATCCGAT
GCTGGCAAGCTCTTCGACTACTGGGTAAATTTCCTACCCGGACAGGGAAG
CAGAACCATCCGCACTGAAGAAGCCGTTTGGATGGGGCTAACGAGTCTCC
AAGGCCTGCTTGATGGCACCCATCGGTTGAGAAAGGCATACCGATGTGAT
CACGACGGTTAAATGCGCCGTCCCAACTATAAGAGACGCAAGACTACCCA
CGAAGATAGTCCTCCTTCGCACCACAATGGCACAACCGATCCCCTGTTCA
CCGAGAAGCCCTCAGCCGTCTTCACCCCCAAGGGTGGCCGATCGCATACA
CTCAGCGTTGCCATTCCGGGCAGCATCATAGACAACGCTCATTCCGTCGA
GCAAAAGACCTTCCTAGCCGGTGTAATCGCACGCGCCCTTGCCGTATTCT
GCGTCGATGAAGTTGTGGTGTTTGACGATAATGAATATGGCGCCCATTGT
GATTATTATGACCATAGAGTCTCCTATGACTCACCCATTGCCAAAACTAG
AGACCAAGTTGATGGCGATACATCCTCTCCAAAAGCATATACCGCGAATT
CAGACCCCTCGCACTTCCTGACTCACGTCCTGTCGTATCTTGAGACTCCA
CCATATTTGCGCAAGCATCTCTTCCGCATCCATCCCAATCTTCGCACCGC
TGGATTGCTGCCCAGCTTGGACATGCCTCATCACTTGCGTGCCAACGAGT
GGTGCGACTTCCGTGAAGGCATTGTCGTTCCTAGTTCAGCGCGGAAAAGT
AACCCGGCCAGCAAGATCACTCAGATGAGCAAAGATCATCCTTTCCACCG
TCGTAATAGCTCTACTAATAATGGCCCTGCCACAATTGTTGACACGGGTC
TCTCACAGAAGATAGTTCTCCCAAACATCCACCTCCCAGAACATGCCCGA
GTCACTGTTCGATTTCTCCAGCATGAGTTCCCCTATGCAGAACCCGTACA
CCCATCCACCCCTCGTGCCGAAGCAGGTTATTACTGGGGCTACTATGTGC
GACGATGTCGATCTCTCTCTTCCGTTTTCACGGAATGTCCCTATGACGGT
GGCTACGATCTGTCCTTCGGCACGTCCGAGCGTGGTGTGCCTGTCTCCGC
AGTGCTAGAGGAGAAGCCACAACAAGCACATGATCGCTACAAGCAAGGCC
ACTCCTTTTGTCGGGATCAAATATCGCCAGACTTCCAGCATATCCTTGTC
GTCTTCGGTGGTGTCGCTGGGATTGAGGCAGCCGTCCGGAACGATCCTCA
ACTCCGTGACATGGCCATCCGCCCATCCGATGCTGGCAAGCTCTTCGACT
ACTGGGTAAATTTCCTACCCGGACAGGGAAGCAGAACCATCCGCACTGAA
GAAGCCGTTTGGATGGGGCTAACGAGTCTCCAAGGCCTGCTTGATGGCAC
CCATCGGTTGAGAAAGGCATACCGATGTGATCACGACGGTTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007271CBS51388_007271Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007271-T1.exon1CBS51388_007271-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007271-T1.exon2CBS51388_007271-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007271-T1.exon3CBS51388_007271-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007271-T1.cdsCBS51388_007271-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007271-T1CBS51388_007271-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_11.14
DBxrefInterPro:IPR029028
DBxrefInterPro:IPR003750
DBxrefInterPro:IPR029026
DBxrefPFAM:PF02598
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2329468..2330889 +
Powered by Drupal