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CBS51388_007273-T1, CBS51388_007273-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007273-T1
Unique NameCBS51388_007273-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2336601..2337851+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007273-T1 ID=CBS51388_007273-T1|Name=CBS51388_007273-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1251bp|location=Sequence derived from alignment at An11:2336601..2337851+ (Aspergillus niger CBS 513.88)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCAGCGAAGAAGGCCAACCCAGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGCAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAGAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
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Coding sequence (CDS) from alignment at An11:2336601..2337851+

>CBS51388_007273-T1 ID=CBS51388_007273-T1|Name=CBS51388_007273-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1251bp|location=Sequence derived from alignment at An11:2336601..2337851+ (Aspergillus niger CBS 513.88)
ATGGCAGCCGCATCAACAAACCGCCTACGGCTTCTCTACACCTCCACGAG
GGCCTCCCTCCCTCAATCCACCCCCAGCATCCTCACAACCCGCACCTACG
CCACGACCGATTCCTCCACCTCCGCCACCAGCACCCCCAAACCACGCCGC
CGCACCGCATTCACAGACAAGCTCAACGCCGGCCCATCCTTCGGGGATTT
CGTTTCCGGCAACAACGACAATGCGCCCCTCATCGACCCTTCCGAAGCCT
ACGCTCTTGAAACCGCTCTCGTCGGCCCCGCCGGCCGCAAAAAGCAAATG
ACCCGTCTTCCACCCTGGTTGAAAACCCCCATCCCCGACTCCAAGAACTA
CCAGCGCCTCAAGAAAGACCTGCGCGGCCTGAACCTCCACACTGTCTGCG
AGGAAGCCCGCTGCCCCAATATTTCCGACTGCTGGGGCGGCGGCGACAAA
GCCGCTGCCACCGCTACCATCATGCTCATGGGCGATACCTGCACCCGCGG
TTGCAGTTTCTGCAGTGTTAAAACGAGCCGGAGGCCCGCTGCGCTGGATC
CCCATGAGCCGGAGAACACGGCCGAGGCCATCTCCCGCTGGGGGCTGGGA
TATGTGGTGCTTACAAGTGTGGATCGTGATGATCTTGCGGATGGCGGTGC
GCGTCATTTCGCTGAGACGGTGCGCAAGATTAAGTCCAAGGCGCCTAGCA
CCCTTGTTGAATGTTTGACGGGTGATTACCGTGGTGATTTGGATATGGTG
GCGCTGGTGGCGAACTCGGGTTTGGATGTGTATGCGCATAATATTGAGAC
TGTTGAGGCGCTTACCCCCCGTGTCCGTGATCGCAGGGCTACCTTCAAGC
AGAGTATTGCTGTGTTGGAGGCAGCGAAGAAGGCCAACCCAGAGGTTATT
ACGAAGTCTTCGTTGATGTTGGGACTTGGGGAGACTGAGGAACAGTTGGA
GCATGCGCTGGCGCAGTTGCGCGCTGTTGATGTTGATGTCGTTACTTTCG
GGCAGTATATGCGTCCGACGAAGAGGCATATGGCTGTGCATGAGTACGTT
CATCCGAGATGGTTCGAGCATTGGCAGCGTCGTGCTGAGGAGTTGGGTTT
CCTCTACTGTGCTTCTGGACCGTTGGTGCGCAGTTCTTATAAGGCTGGTG
AGGCGTTCATTGAGAATGTCTTGAAGAAGAGGCGCGCCGGGGTTAGTGAT
GCTGTTGCCGAGAAGAAGGTTGCTGCTGCTGTTGATGAGGCTGCTCGTTG
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009107lipoate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0016992lipoate synthase activity
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007273CBS51388_007273Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007273-T1.exon1CBS51388_007273-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007273-T1.cdsCBS51388_007273-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007273-T1CBS51388_007273-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_11.14
NoteBUSCO:EOG0926131E
DBxrefInterPro:IPR031691
DBxrefInterPro:IPR003698
DBxrefInterPro:IPR007197
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR006638
DBxrefPFAM:PF04055
DBxrefPFAM:PF16881
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2336601..2337851 +
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