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CBS51388_007300-T1, CBS51388_007300-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007300-T1
Unique NameCBS51388_007300-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2405266..2406225-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007300-T1 ID=CBS51388_007300-T1|Name=CBS51388_007300-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=960bp|location=Sequence derived from alignment at An11:2405266..2406225- (Aspergillus niger CBS 513.88)
ATGGCCACTGGTCCAGCTACTCAATCCCTCAAGGTCAGCATCATCCACCT
GCGTGTCCGTCTGTCAGATTGCGGCTAACGGAGCGCTGGTGCACACAGTG
TGTGGTGACGGGTGATGGTGCGGTAGGAAAAGTATGTTGCTCCCCTTTCA
ACCAGCTCGACCTCTCTCTCCCCCCTCCCTCCCCCCCTCTTGCTTCCTAG
ATCGGTCGATTTCGTTATCGCTGTTGCTAATCGAACAATAGACATGTCTC
CTGATTTCGTACACGACCAACGCTTTCCCCGGCGAATATATCCCTACCGT
GTCCGTACCCCCCTTGGGCCCTGATACTCCTCGTCTGATGCGGACCTCGT
GTGTTGACCGGATTCCCGCAGATTTGATAACTACACCGCTAGTGTCATGG
TAGATGGCCGACCGATTAGCTTGGGACTCTGGGATACTGCTGGACAGGAA
GATTACGACCGTCTTCGCCCATTGTCCTACCCGCAAACCGACGTCTTCCT
GATCTGCTTCTCCATCGTTAGCCCGCCGTCCTTTGACAACGTTAAAGCCA
AGGTGCTTCCTTCACCATCCCTACCGACCGGAGACCCGCTTACTGACCCT
GACGGATGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGGTATGT
TCGAACAAACCCATATACTACTGGAATTGGGGGACTAACGTTCACATAGC
GCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCGT
GATTCTGTAG
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Coding sequence (CDS) from alignment at An11:2405266..2406225-

>CBS51388_007300-T1 ID=CBS51388_007300-T1|Name=CBS51388_007300-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3474bp|location=Sequence derived from alignment at An11:2405266..2406225- (Aspergillus niger CBS 513.88)
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGTGTCAT
GGTAGATGGCCGACCGATTAGCTTGGGACTCTGGGATACTGCTGGACAGG
AAGATTACGACCGTCTTCGCCCATTGTCCTACCCGCAAACCGACGTCTTC
CTGATCTGCTTCTCCATCGTTAGCCCGCCGTCCTTTGACAACGTTAAAGC
CAAGACATGTCTCCTGATTTCGTACACGACCAACGCTTTCCCCGGCGAAT
ATATCCCTACCGTTGTGTGGTGACGGGTGATGGTGCGGTAGGAAAAATGG
CCACTGGTCCAGCTACTCAATCCCTCAAGCGCCGTGCTCAATCCCCGGCC
TGCGGCCAAACCGAAGAACAAGAAATGCGTGATTCTGTAGTGGTTCCCGG
AGATTGAACACCATGCCCCCAACGTCCCCATTATCTTGGTCGGCACCAAG
CTCGACCTTCGAGACGACCGTGGTACCATAGATGCTCTCCGACAGCGGAA
GATGGAGCCCGTCTCCTACGAACAAGCTCTGGCCGTGGCCAAGGAAATCC
GGGCACACAAGTACCTCGAATGTTCGGCCCTGACGCAGCGCAACCTGAAG
AGTGTATTCGACGAGGCGATTCGTGTCATGGTAGATGGCCGACCGATTAG
CTTGGGACTCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCC
CATTGTCCTACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTT
AGCCCGCCGTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTC
GTACACGACCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGT
GACGGGTGATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAAT
CCCTCAAGCGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAA
GAAATGCGTGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCA
ACGTCCCCATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGT
GGTACCATAGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGA
ACAAGCTCTGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAAT
GTTCGGCCCTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATT
CGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGACTCTGGGATACTGC
TGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCCTACCCGCAAACCG
ACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCCGTCCTTTGACAAC
GTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGACCAACGCTTTCCC
CGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTGATGGTGCGGTAGG
AAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAGCGCCGTGCTCAAT
CCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCGTGATTCTGTAGTG
GTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCCATTATCTTGGTCG
GCACCAAGCTCGACCTTCGAGACGACCGTGGTACCATAGATGCTCTCCGA
CAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTCTGGCCGTGGCCAA
GGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCCCTGACGCAGCGCA
ACCTGAAGAGTGTATTCGACGAGGCGATTCGTGTCATGGTAGATGGCCGA
CCGATTAGCTTGGGACTCTGGGATACTGCTGGACAGGAAGATTACGACCG
TCTTCGCCCATTGTCCTACCCGCAAACCGACGTCTTCCTGATCTGCTTCT
CCATCGTTAGCCCGCCGTCCTTTGACAACGTTAAAGCCAAGACATGTCTC
CTGATTTCGTACACGACCAACGCTTTCCCCGGCGAATATATCCCTACCGT
TGTGTGGTGACGGGTGATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGC
TACTCAATCCCTCAAGCGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCG
AAGAACAAGAAATGCGTGATTCTGTAGTGGTTCCCGGAGATTGAACACCA
TGCCCCCAACGTCCCCATTATCTTGGTCGGCACCAAGCTCGACCTTCGAG
ACGACCGTGGTACCATAGATGCTCTCCGACAGCGGAAGATGGAGCCCGTC
TCCTACGAACAAGCTCTGGCCGTGGCCAAGGAAATCCGGGCACACAAGTA
CCTCGAATGTTCGGCCCTGACGCAGCGCAACCTGAAGAGTGTATTCGACG
AGGCGATTCGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGACTCTGG
GATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCCTACCC
GCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCCGTCCT
TTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGACCAAC
GCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTGATGGT
GCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAGCGCCG
TGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCGTGATT
CTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCCATTAT
CTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCATAGATG
CTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTCTGGCC
GTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCCCTGAC
GCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGTGTCATGGTAG
ATGGCCGACCGATTAGCTTGGGACTCTGGGATACTGCTGGACAGGAAGAT
TACGACCGTCTTCGCCCATTGTCCTACCCGCAAACCGACGTCTTCCTGAT
CTGCTTCTCCATCGTTAGCCCGCCGTCCTTTGACAACGTTAAAGCCAAGA
CATGTCTCCTGATTTCGTACACGACCAACGCTTTCCCCGGCGAATATATC
CCTACCGTTGTGTGGTGACGGGTGATGGTGCGGTAGGAAAAATGGCCACT
GGTCCAGCTACTCAATCCCTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAC1CBS51388_007300Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007300-T1CBS51388_007300-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007300-T1.cdsCBS51388_007300-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007300-T1.exon6CBS51388_007300-T1.exon6Aspergillus niger CBS 513.88exon
CBS51388_007300-T1.exon5CBS51388_007300-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_007300-T1.exon4CBS51388_007300-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007300-T1.exon3CBS51388_007300-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007300-T1.exon2CBS51388_007300-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007300-T1.exon1CBS51388_007300-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductRho GTPase protein rac1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2405266..2406225 -
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