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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2419381..2420135- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007305-T1 ID=CBS51388_007305-T1|Name=CBS51388_007305-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=755bp|location=Sequence derived from alignment at An11:2419381..2420135- (Aspergillus niger CBS 513.88)
ATGTCCATCGAAAACCTCAAGACCTTCGGTGAGTCGCTTCGCCACCTCCC
CTCCCCCCCTTCTGTGGACATCGTCACCAGGCCCGCAGTACTGCCTGCAG
CAGATGTTGGTCTCCCTAGCGATGGTTTTTGAAAAGATCATTGCGAAGTT
GGCTCTTCTTGCTAAGGCTTGGCTGTGTAGCCAGGGTTGTCCCTTTTGAT
CCAACTGCGTCACAAGTTGGCGGGGTAATACTTGGTCATGAGAGCCTGAG
GCTGACACGTGCTCTTCCACAGACCCCTTCGCCGAAGCTGACGAAGACAC
CGGCGAGACTAAACAGTCTCAAAATTACATCCATATACGGATTCAACGTA
CGTTCTATTGTCGTCTTCTCCACGTGGTGCCTTGGCCCCTGTCATCGTCG
CTGGTGGCGCCACGCTGTCTTGTCATGCACCTATGACTAACATGTATCTG
TCCACAGAGCGCAATGGTCGTAAGACCTTGACCACCGTCCAGGGTCTTCC
TAAGAAGTTCGATCAGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCG
GTATGTTGTCGCCTACTACCTACGTGCCTCGCCATATCACTAACTTGCCT
TGTCAGCCTGCAATGGCACCATTGTCAACGACACTGAGATGGGCGAGGTG
ATTCAGCTGCAGGGAGACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGA
CAAGAAGGAGGGTCTCGAGCTGGACGCCAAGACCATCAAGGTCCACGGTT
TCTAA back to topCoding sequence (CDS) from alignment at An11:2419381..2420135- >CBS51388_007305-T1 ID=CBS51388_007305-T1|Name=CBS51388_007305-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1380bp|location=Sequence derived from alignment at An11:2419381..2420135- (Aspergillus niger CBS 513.88)
CCTGCAATGGCACCATTGTCAACGACACTGAGATGGGCGAGGTGATTCAG
CTGCAGGGAGACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAA
GGAGGGTCTCGAGCTGGACGCCAAGACCATCAAGGTCCACGGTTTCTAAA
GCGCAATGGTCGTAAGACCTTGACCACCGTCCAGGGTCTTCCTAAGAAGT
TCGATCAGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCGACCCCTTC
GCCGAAGCTGACGAAGACACCGGCGAGACTAAACAGTCTCAAAATTACAT
CCATATACGGATTCAACATGTCCATCGAAAACCTCAAGACCTTCGCCTGC
AATGGCACCATTGTCAACGACACTGAGATGGGCGAGGTGATTCAGCTGCA
GGGAGACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAGG
GTCTCGAGCTGGACGCCAAGACCATCAAGGTCCACGGTTTCTAAAGCGCA
ATGGTCGTAAGACCTTGACCACCGTCCAGGGTCTTCCTAAGAAGTTCGAT
CAGAAGAAGATCTTGAAGGTCATCAAGAAGAAGTTCGACCCCTTCGCCGA
AGCTGACGAAGACACCGGCGAGACTAAACAGTCTCAAAATTACATCCATA
TACGGATTCAACATGTCCATCGAAAACCTCAAGACCTTCGCCTGCAATGG
CACCATTGTCAACGACACTGAGATGGGCGAGGTGATTCAGCTGCAGGGAG
ACCAGCGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAGGGTCTC
GAGCTGGACGCCAAGACCATCAAGGTCCACGGTTTCTAAAGCGCAATGGT
CGTAAGACCTTGACCACCGTCCAGGGTCTTCCTAAGAAGTTCGATCAGAA
GAAGATCTTGAAGGTCATCAAGAAGAAGTTCGACCCCTTCGCCGAAGCTG
ACGAAGACACCGGCGAGACTAAACAGTCTCAAAATTACATCCATATACGG
ATTCAACATGTCCATCGAAAACCTCAAGACCTTCGCCTGCAATGGCACCA
TTGTCAACGACACTGAGATGGGCGAGGTGATTCAGCTGCAGGGAGACCAG
CGTAAAGATGTTCAGGAGTTCTTGACCGACAAGAAGGAGGGTCTCGAGCT
GGACGCCAAGACCATCAAGGTCCACGGTTTCTAAAGCGCAATGGTCGTAA
GACCTTGACCACCGTCCAGGGTCTTCCTAAGAAGTTCGATCAGAAGAAGA
TCTTGAAGGTCATCAAGAAGAAGTTCGACCCCTTCGCCGAAGCTGACGAA
GACACCGGCGAGACTAAACAGTCTCAAAATTACATCCATATACGGATTCA
ACATGTCCATCGAAAACCTCAAGACCTTCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003743 | translation initiation factor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036877 |
| DBxref | InterPro:IPR001950 |
| DBxref | InterPro:IPR005874 |
| DBxref | PFAM:PF01253 |
| Product | Eukaryotic translation initiation factor eIF-1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2419381..2420135 - |
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