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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2484615..2486025- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007329-T1 ID=CBS51388_007329-T1|Name=CBS51388_007329-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1411bp|location=Sequence derived from alignment at An11:2484615..2486025- (Aspergillus niger CBS 513.88)
ATGAAAGCACGGACGGTGCCGGCATCCGGGCTGGTGCTCTCGTCACGCGT
CACGTCTTCCACGATAGTTTGCTGGCAATGCCTCCGAAACGAATTGGTTG
CAAATCAATTCCAGCTTCAATCACGAAAGTATCACCCGACAAAACGTAAG
GATGTGTCGCCGCTGGGTGCCGCCGTCTCTGCAGCTCAGACCATCTTCAA
AGGCCTCCCCAAGGCACCTCCGGGCATTTCCGTCGACCCATTGCGGATGG
TAGGAAAGGAACTCAAATTCTTGACGAAGAACCTTCGGCAGCTACTGGGA
TCCGGCCATCCTACACTGGATAAGGTGGCCAAATACTACACCCGCAGTGA
GGGTAAACACATGCGGCCGCTTCTGGTGCTGCTGATGTCTCAGGCGACGG
CGCTGTGTCCCCGGAAGACTGGCACGGACAACAATTCCGCAACAGTGAAC
GACCCGATCAGCTCGCCCTCAATCCTCGTCGATAACAATCCGGACCTGGA
TGCGCTCTCATCCGGTAGTGCCGATGCGCCGTACGACTTTGCCGGCGACA
AGGACATCCTGCCCACCCAGCGGCGGCTTGCTGAAATCACCGAATTGATC
CACACTGCGTCCCTCCTGCACGACGACGTCATCGATAATGCTGTGTCCCG
CCGTTCTTTAACGTCTGCCAACCTCCAATTTGGAAACAAGATGGCTGTTT
TGGCGGGAGACTTCATGCTGGGTCGGGCCTCCGTCGCTCTGGCGCGGCTG
AGGGACCCGGAGGTCATTGAGCTGATGTCTACTGTCATCACCAACCTTGT
TGAGGGCGAGTTCATGCAGTTGAAGAACACGGCTGCGGACGAGAAGAACC
CCGTTTTCACGGACGACACCCTCTCGTACTACCTGCAGAAGACATACCTG
AAGACGGGCAGTTTGATCAGCAAGTCCTGCCGGTCAACTGCCGTGCTGGG
TCACAGCGCCCCCGAGGTCGTCGAAGCCTCCTACCAGTACGGACGCAACT
TGGGACTGGCGTTCCAGCTTGTGGACGATATGCTGGACTATACCCTGACC
GAGGCTGAGTTGGGCAAGCCAGCTGGCGCGGACCTGGAGCTGGGTCTTGC
TACGGCCCCGCTGCTCTTTGCCTGGAAACAGTTCCCAGAGCTTGGCCCGT
TGGTTGGCCGGAAGTTCAGCCAACCCGGCGATGTTCAAAAGGTAATGCGA
TCCTAGTTGCAACAAAAAAGTCTTGACACTAACATTGATTGATCACCAGG
CTCGGGAGCTTGTTATCAAGGCCGACGGTGTTGAACAGACCCGTATCCTG
GCCCAGGAGTATGCGGATAAGGCTGTCGCTGCGATTTCTGACTTCCCTGA
CAGCGACGCCAAGGCTGGTTTGGCCCAGATGTGCGAGAAGACCATGAAGC
GGAGAAAGTGA back to topCoding sequence (CDS) from alignment at An11:2484615..2486025- >CBS51388_007329-T1 ID=CBS51388_007329-T1|Name=CBS51388_007329-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2706bp|location=Sequence derived from alignment at An11:2484615..2486025- (Aspergillus niger CBS 513.88)
GCTCGGGAGCTTGTTATCAAGGCCGACGGTGTTGAACAGACCCGTATCCT
GGCCCAGGAGTATGCGGATAAGGCTGTCGCTGCGATTTCTGACTTCCCTG
ACAGCGACGCCAAGGCTGGTTTGGCCCAGATGTGCGAGAAGACCATGAAG
CGGAGAAAGTGAATGAAAGCACGGACGGTGCCGGCATCCGGGCTGGTGCT
CTCGTCACGCGTCACGTCTTCCACGATAGTTTGCTGGCAATGCCTCCGAA
ACGAATTGGTTGCAAATCAATTCCAGCTTCAATCACGAAAGTATCACCCG
ACAAAACGTAAGGATGTGTCGCCGCTGGGTGCCGCCGTCTCTGCAGCTCA
GACCATCTTCAAAGGCCTCCCCAAGGCACCTCCGGGCATTTCCGTCGACC
CATTGCGGATGGTAGGAAAGGAACTCAAATTCTTGACGAAGAACCTTCGG
CAGCTACTGGGATCCGGCCATCCTACACTGGATAAGGTGGCCAAATACTA
CACCCGCAGTGAGGGTAAACACATGCGGCCGCTTCTGGTGCTGCTGATGT
CTCAGGCGACGGCGCTGTGTCCCCGGAAGACTGGCACGGACAACAATTCC
GCAACAGTGAACGACCCGATCAGCTCGCCCTCAATCCTCGTCGATAACAA
TCCGGACCTGGATGCGCTCTCATCCGGTAGTGCCGATGCGCCGTACGACT
TTGCCGGCGACAAGGACATCCTGCCCACCCAGCGGCGGCTTGCTGAAATC
ACCGAATTGATCCACACTGCGTCCCTCCTGCACGACGACGTCATCGATAA
TGCTGTGTCCCGCCGTTCTTTAACGTCTGCCAACCTCCAATTTGGAAACA
AGATGGCTGTTTTGGCGGGAGACTTCATGCTGGGTCGGGCCTCCGTCGCT
CTGGCGCGGCTGAGGGACCCGGAGGTCATTGAGCTGATGTCTACTGTCAT
CACCAACCTTGTTGAGGGCGAGTTCATGCAGTTGAAGAACACGGCTGCGG
ACGAGAAGAACCCCGTTTTCACGGACGACACCCTCTCGTACTACCTGCAG
AAGACATACCTGAAGACGGGCAGTTTGATCAGCAAGTCCTGCCGGTCAAC
TGCCGTGCTGGGTCACAGCGCCCCCGAGGTCGTCGAAGCCTCCTACCAGT
ACGGACGCAACTTGGGACTGGCGTTCCAGCTTGTGGACGATATGCTGGAC
TATACCCTGACCGAGGCTGAGTTGGGCAAGCCAGCTGGCGCGGACCTGGA
GCTGGGTCTTGCTACGGCCCCGCTGCTCTTTGCCTGGAAACAGTTCCCAG
AGCTTGGCCCGTTGGTTGGCCGGAAGTTCAGCCAACCCGGCGATGTTCAA
AAGGCTCGGGAGCTTGTTATCAAGGCCGACGGTGTTGAACAGACCCGTAT
CCTGGCCCAGGAGTATGCGGATAAGGCTGTCGCTGCGATTTCTGACTTCC
CTGACAGCGACGCCAAGGCTGGTTTGGCCCAGATGTGCGAGAAGACCATG
AAGCGGAGAAAGTGAATGAAAGCACGGACGGTGCCGGCATCCGGGCTGGT
GCTCTCGTCACGCGTCACGTCTTCCACGATAGTTTGCTGGCAATGCCTCC
GAAACGAATTGGTTGCAAATCAATTCCAGCTTCAATCACGAAAGTATCAC
CCGACAAAACGTAAGGATGTGTCGCCGCTGGGTGCCGCCGTCTCTGCAGC
TCAGACCATCTTCAAAGGCCTCCCCAAGGCACCTCCGGGCATTTCCGTCG
ACCCATTGCGGATGGTAGGAAAGGAACTCAAATTCTTGACGAAGAACCTT
CGGCAGCTACTGGGATCCGGCCATCCTACACTGGATAAGGTGGCCAAATA
CTACACCCGCAGTGAGGGTAAACACATGCGGCCGCTTCTGGTGCTGCTGA
TGTCTCAGGCGACGGCGCTGTGTCCCCGGAAGACTGGCACGGACAACAAT
TCCGCAACAGTGAACGACCCGATCAGCTCGCCCTCAATCCTCGTCGATAA
CAATCCGGACCTGGATGCGCTCTCATCCGGTAGTGCCGATGCGCCGTACG
ACTTTGCCGGCGACAAGGACATCCTGCCCACCCAGCGGCGGCTTGCTGAA
ATCACCGAATTGATCCACACTGCGTCCCTCCTGCACGACGACGTCATCGA
TAATGCTGTGTCCCGCCGTTCTTTAACGTCTGCCAACCTCCAATTTGGAA
ACAAGATGGCTGTTTTGGCGGGAGACTTCATGCTGGGTCGGGCCTCCGTC
GCTCTGGCGCGGCTGAGGGACCCGGAGGTCATTGAGCTGATGTCTACTGT
CATCACCAACCTTGTTGAGGGCGAGTTCATGCAGTTGAAGAACACGGCTG
CGGACGAGAAGAACCCCGTTTTCACGGACGACACCCTCTCGTACTACCTG
CAGAAGACATACCTGAAGACGGGCAGTTTGATCAGCAAGTCCTGCCGGTC
AACTGCCGTGCTGGGTCACAGCGCCCCCGAGGTCGTCGAAGCCTCCTACC
AGTACGGACGCAACTTGGGACTGGCGTTCCAGCTTGTGGACGATATGCTG
GACTATACCCTGACCGAGGCTGAGTTGGGCAAGCCAGCTGGCGCGGACCT
GGAGCTGGGTCTTGCTACGGCCCCGCTGCTCTTTGCCTGGAAACAGTTCC
CAGAGCTTGGCCCGTTGGTTGGCCGGAAGTTCAGCCAACCCGGCGATGTT
CAAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092634B5 |
| DBxref | InterPro:IPR008949 |
| DBxref | InterPro:IPR033749 |
| DBxref | InterPro:IPR000092 |
| DBxref | PFAM:PF00348 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2484615..2486025 - |
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