You are here

Home

CBS51388_007332-T1, CBS51388_007332-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007332-T1
Unique NameCBS51388_007332-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2491732..2493626+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007332-T1 ID=CBS51388_007332-T1|Name=CBS51388_007332-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1895bp|location=Sequence derived from alignment at An11:2491732..2493626+ (Aspergillus niger CBS 513.88)
ATGGACAACTCACAGGCACAGCCCCAGGCTGCTCAACCCCAGGCCCCTGC
AGCCCAGCCGATGATGCCGCAGCACTCCAACCTGATCCGAACCGACCAAG
TCCAGAAGCTTCCCCATCTCAACGACCAGCAGAAAGCCCAGCACACCCAG
CTCGTGCGGACCTTATGGGAACATCTCAATAGTCGGGAACCGCAGACTAC
CGAGTATCAACAGGCTCATGCGAGACTCACCCAGATTTCCCAAAATCTCA
TGAAAGGCATGCGCGCTTTTCAGCAAAGCCGCCAAATGCAACACCAGCAA
TTGCAAGCGGCAAACGCAGCGCAACCAGGTCAACCAGTCCAGCGATCGCA
GTCGGTTAATCCGCAGAACTTCGCGCAGCTTCTCCCTCAGATTCAGCAGA
AAGTCAACACTCTGCAGTTCTTCCTCCCTCCGAACATCAGCAACGAGCAG
GCCCAGACCTGGCTCCCCGAAGCCAAACTACGATATGGGATCGCGCTTCA
GAAGCAGGAGATCGGACGGGCGCGAATCGCGGATCTCAGACAACAGTTTG
CGACGCGTCAGTCTGCGGGAAATATGACTCAGGAGGAGGTGCAGGAGTTC
AAGAACCGGCAACTTGCGGCGGAGAAGCTTTACCGCGAGGGAAGCGACTT
CCTGAACAAATTCAAGGAACAGCAGGATACCTTCAAGGCCCAGCAACAGC
GAGCTGGTGTGCAACAACATGTTCCTGCTCAAGCGCATCCACAGCAAGCT
CCTAGTCAAGCTGCGCCCGGTACAGCTGCTGGCCCCGCCGACGGCCGTCC
ACCAAGCGTCCCCGGCACCATGCATCCAGGCCAGACCCCTACCCCGGCGC
CTCACACAATCACATCGGCAGTTTCCGCTGCACGCAACCAGGCGGGACAG
ACTGCGATGTCGCCTTCGACTTCTCAGCCCGGTCAAACGCCAACCGCCCA
GGGCGCCACGCCTGCCGTCCCTGCTGTGCCCCAACAGCAACCGCCACAGC
AAGCACCCCAGCAACAGCCACAGGCCCCGGTCCAGGCACAGTCACAGCAG
GGCCCACCAGGCTCACAGGTCACCTTCACTCAAGTCCCCAATGTCGACGG
TTCAACTCCCACTCCTCCTGGGGCTCAGACCATGGTCCAACCTCGTCCTT
TGTCTCAGCAGGCCGCCATGGCTCAAGCTGCGCAGAACTACTCTAACAAC
AACGTTAACAACAATAACATGAATCAGCAGCAGAACGTCACTCAGCCTGG
CGCCAACACCCACGCTCACCCCCAGGGCTACATTCCCAACCGCTCTGCCG
ACACTAACGCGCGTAGCATCAACATGGCCATCCCCAAGAACCTGAATGTG
CCTCCTCCAGAGCCCGTCAACATGGCTCCTGCTCGGCCCACGTTATCTGG
CGGACCCAGTCACGGTGCAGTCGGTGTGATGAATCAGCCTGCAATCCAGA
AACACCCCGGCTACGTGCTCGAGGGTGAAGGTCAGCGCGTTCTGAGCAAG
AAGATGCTGGATATTCTCGTTCGTCAGGTCACTGGTGGTGGAGAGGGCGA
AGGACTCACCCCCGATGCTGAAGAGGTAAGTCCCGTGATTTCCCAGGATC
CTTCTCAGAATCAATAAAAGTCTAATTCCCCTACGTGCAGTTCATCCTTC
AGATGGCAGATGACTTTGTTGACGATGTGATCACGGATGCCTGCCGTCTC
GCCAAACTCCGCCCGTCCTCGACTCTCGAGATTCGCGATATTCAGCTTGT
CTTGGAGCGCAAGTACAATATGCGCATTTCCGGATTTTCCACTGACGACC
TGCGTACTGTCAAGAAGCCTCAGCCCACTCAAGGCTGGACCCAGAAGATG
TCCGCCATTCAGGCTGCCAAGGTAACCCAAGGCAAGGCCGAATGA
back to top

Coding sequence (CDS) from alignment at An11:2491732..2493626+

>CBS51388_007332-T1 ID=CBS51388_007332-T1|Name=CBS51388_007332-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3660bp|location=Sequence derived from alignment at An11:2491732..2493626+ (Aspergillus niger CBS 513.88)
ATGGACAACTCACAGGCACAGCCCCAGGCTGCTCAACCCCAGGCCCCTGC
AGCCCAGCCGATGATGCCGCAGCACTCCAACCTGATCCGAACCGACCAAG
TCCAGAAGCTTCCCCATCTCAACGACCAGCAGAAAGCCCAGCACACCCAG
CTCGTGCGGACCTTATGGGAACATCTCAATAGTCGGGAACCGCAGACTAC
CGAGTATCAACAGGCTCATGCGAGACTCACCCAGATTTCCCAAAATCTCA
TGAAAGGCATGCGCGCTTTTCAGCAAAGCCGCCAAATGCAACACCAGCAA
TTGCAAGCGGCAAACGCAGCGCAACCAGGTCAACCAGTCCAGCGATCGCA
GTCGGTTAATCCGCAGAACTTCGCGCAGCTTCTCCCTCAGATTCAGCAGA
AAGTCAACACTCTGCAGTTCTTCCTCCCTCCGAACATCAGCAACGAGCAG
GCCCAGACCTGGCTCCCCGAAGCCAAACTACGATATGGGATCGCGCTTCA
GAAGCAGGAGATCGGACGGGCGCGAATCGCGGATCTCAGACAACAGTTTG
CGACGCGTCAGTCTGCGGGAAATATGACTCAGGAGGAGGTGCAGGAGTTC
AAGAACCGGCAACTTGCGGCGGAGAAGCTTTACCGCGAGGGAAGCGACTT
CCTGAACAAATTCAAGGAACAGCAGGATACCTTCAAGGCCCAGCAACAGC
GAGCTGGTGTGCAACAACATGTTCCTGCTCAAGCGCATCCACAGCAAGCT
CCTAGTCAAGCTGCGCCCGGTACAGCTGCTGGCCCCGCCGACGGCCGTCC
ACCAAGCGTCCCCGGCACCATGCATCCAGGCCAGACCCCTACCCCGGCGC
CTCACACAATCACATCGGCAGTTTCCGCTGCACGCAACCAGGCGGGACAG
ACTGCGATGTCGCCTTCGACTTCTCAGCCCGGTCAAACGCCAACCGCCCA
GGGCGCCACGCCTGCCGTCCCTGCTGTGCCCCAACAGCAACCGCCACAGC
AAGCACCCCAGCAACAGCCACAGGCCCCGGTCCAGGCACAGTCACAGCAG
GGCCCACCAGGCTCACAGGTCACCTTCACTCAAGTCCCCAATGTCGACGG
TTCAACTCCCACTCCTCCTGGGGCTCAGACCATGGTCCAACCTCGTCCTT
TGTCTCAGCAGGCCGCCATGGCTCAAGCTGCGCAGAACTACTCTAACAAC
AACGTTAACAACAATAACATGAATCAGCAGCAGAACGTCACTCAGCCTGG
CGCCAACACCCACGCTCACCCCCAGGGCTACATTCCCAACCGCTCTGCCG
ACACTAACGCGCGTAGCATCAACATGGCCATCCCCAAGAACCTGAATGTG
CCTCCTCCAGAGCCCGTCAACATGGCTCCTGCTCGGCCCACGTTATCTGG
CGGACCCAGTCACGGTGCAGTCGGTGTGATGAATCAGCCTGCAATCCAGA
AACACCCCGGCTACGTGCTCGAGGGTGAAGGTCAGCGCGTTCTGAGCAAG
AAGATGCTGGATATTCTCGTTCGTCAGGTCACTGGTGGTGGAGAGGGCGA
AGGACTCACCCCCGATGCTGAAGAGTTCATCCTTCAGATGGCAGATGACT
TTGTTGACGATGTGATCACGGATGCCTGCCGTCTCGCCAAACTCCGCCCG
TCCTCGACTCTCGAGATTCGCGATATTCAGCTTGTCTTGGAGCGCAAGTA
CAATATGCGCATTTCCGGATTTTCCACTGACGACCTGCGTACTGTCAAGA
AGCCTCAGCCCACTCAAGGCTGGACCCAGAAGATGTCCGCCATTCAGGCT
GCCAAGGTAACCCAAGGCAAGGCCGAATGAATGGACAACTCACAGGCACA
GCCCCAGGCTGCTCAACCCCAGGCCCCTGCAGCCCAGCCGATGATGCCGC
AGCACTCCAACCTGATCCGAACCGACCAAGTCCAGAAGCTTCCCCATCTC
AACGACCAGCAGAAAGCCCAGCACACCCAGCTCGTGCGGACCTTATGGGA
ACATCTCAATAGTCGGGAACCGCAGACTACCGAGTATCAACAGGCTCATG
CGAGACTCACCCAGATTTCCCAAAATCTCATGAAAGGCATGCGCGCTTTT
CAGCAAAGCCGCCAAATGCAACACCAGCAATTGCAAGCGGCAAACGCAGC
GCAACCAGGTCAACCAGTCCAGCGATCGCAGTCGGTTAATCCGCAGAACT
TCGCGCAGCTTCTCCCTCAGATTCAGCAGAAAGTCAACACTCTGCAGTTC
TTCCTCCCTCCGAACATCAGCAACGAGCAGGCCCAGACCTGGCTCCCCGA
AGCCAAACTACGATATGGGATCGCGCTTCAGAAGCAGGAGATCGGACGGG
CGCGAATCGCGGATCTCAGACAACAGTTTGCGACGCGTCAGTCTGCGGGA
AATATGACTCAGGAGGAGGTGCAGGAGTTCAAGAACCGGCAACTTGCGGC
GGAGAAGCTTTACCGCGAGGGAAGCGACTTCCTGAACAAATTCAAGGAAC
AGCAGGATACCTTCAAGGCCCAGCAACAGCGAGCTGGTGTGCAACAACAT
GTTCCTGCTCAAGCGCATCCACAGCAAGCTCCTAGTCAAGCTGCGCCCGG
TACAGCTGCTGGCCCCGCCGACGGCCGTCCACCAAGCGTCCCCGGCACCA
TGCATCCAGGCCAGACCCCTACCCCGGCGCCTCACACAATCACATCGGCA
GTTTCCGCTGCACGCAACCAGGCGGGACAGACTGCGATGTCGCCTTCGAC
TTCTCAGCCCGGTCAAACGCCAACCGCCCAGGGCGCCACGCCTGCCGTCC
CTGCTGTGCCCCAACAGCAACCGCCACAGCAAGCACCCCAGCAACAGCCA
CAGGCCCCGGTCCAGGCACAGTCACAGCAGGGCCCACCAGGCTCACAGGT
CACCTTCACTCAAGTCCCCAATGTCGACGGTTCAACTCCCACTCCTCCTG
GGGCTCAGACCATGGTCCAACCTCGTCCTTTGTCTCAGCAGGCCGCCATG
GCTCAAGCTGCGCAGAACTACTCTAACAACAACGTTAACAACAATAACAT
GAATCAGCAGCAGAACGTCACTCAGCCTGGCGCCAACACCCACGCTCACC
CCCAGGGCTACATTCCCAACCGCTCTGCCGACACTAACGCGCGTAGCATC
AACATGGCCATCCCCAAGAACCTGAATGTGCCTCCTCCAGAGCCCGTCAA
CATGGCTCCTGCTCGGCCCACGTTATCTGGCGGACCCAGTCACGGTGCAG
TCGGTGTGATGAATCAGCCTGCAATCCAGAAACACCCCGGCTACGTGCTC
GAGGGTGAAGGTCAGCGCGTTCTGAGCAAGAAGATGCTGGATATTCTCGT
TCGTCAGGTCACTGGTGGTGGAGAGGGCGAAGGACTCACCCCCGATGCTG
AAGAGTTCATCCTTCAGATGGCAGATGACTTTGTTGACGATGTGATCACG
GATGCCTGCCGTCTCGCCAAACTCCGCCCGTCCTCGACTCTCGAGATTCG
CGATATTCAGCTTGTCTTGGAGCGCAAGTACAATATGCGCATTTCCGGAT
TTTCCACTGACGACCTGCGTACTGTCAAGAAGCCTCAGCCCACTCAAGGC
TGGACCCAGAAGATGTCCGCCATTCAGGCTGCCAAGGTAACCCAAGGCAA
GGCCGAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005669transcription factor TFIID complex
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007332CBS51388_007332Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007332-T1.exon1CBS51388_007332-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007332-T1.exon2CBS51388_007332-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007332-T1.cdsCBS51388_007332-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007332-T1CBS51388_007332-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003228
DBxrefInterPro:IPR009072
DBxrefPFAM:PF03847
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2491732..2493626 +
Powered by Drupal