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CBS51388_007334-T1, CBS51388_007334-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007334-T1
Unique NameCBS51388_007334-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2502296..2503582-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007334-T1 ID=CBS51388_007334-T1|Name=CBS51388_007334-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1287bp|location=Sequence derived from alignment at An11:2502296..2503582- (Aspergillus niger CBS 513.88)
ATGCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTC
GAGCCACGCCTCCTACCGTGGTATGTTTTGACTGATCTTCCACCACCAAC
CCATCGCGTAGAATTGAAATTAATATCGTTTTTGTCGCGAATGACTGCTG
ATTCCATGAATATAGATATGATCAAGGATGCTATCCTGAATGTGAGTTAA
TCACGCTGTTCCCGGTGCGCGTTGGGATGAACGGGCGCTGGGCGGGATCT
CCGACCGTGACACGTCTACACGGTGCTTAATTGTCCCAACGCCCCATCGG
GCTCCTGCTTGTTTCACCTCCCAAATGGGTCGCTGACTTCTTTCGCAACA
GCTGAAAGAGCGCAATGGTAGCAGGTAAGTTGTTTGGTGCTTCTTCTCCC
CCGCCCGATGCAGGGTCCCGTTCGCTGGCGACGTGGCAACCTATCACCCT
GTCCAGGTCGCGATCTCGGCTGACTCGTCTTGTTTCTCCTCGACTGTAGC
CGCCAGTCGATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGC
CTCCACCAACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTG
TTGAGAAGGGCGAGTTCCTTCAGCCCAAGGGTAAGTCAATCCGTCGCGCG
CATTTTTTGCCTTCTCATGTCGCAACGGCATTCGATACTCCTGACATGGA
AGGATGTGTCTTGACTGCCGTCGTTCGCGTCTTTCATTTTTCGGTCTTGT
TTTTTTTTGATGGGGCGTGTCAACTGACGCGTCGTCAACCAGGCCCCTCC
GGACCCGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCTAA
GGTAAGTCTTTATCAATGACATTTCGAACTGATAGAGAACTATTACTAAC
ACTGTCCATAGAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCT
GCCAAGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAA
GACCACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCA
AGGCTAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGTAAGTTGTAGA
CTCCTGCCTTCTCACCCCCGGCGGACAGGGTATACTAATCTTGAAGCAGG
CTCCCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGC
CGGGTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGAC
CACTAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAA
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Coding sequence (CDS) from alignment at An11:2502296..2503582-

>CBS51388_007334-T1 ID=CBS51388_007334-T1|Name=CBS51388_007334-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4368bp|location=Sequence derived from alignment at An11:2502296..2503582- (Aspergillus niger CBS 513.88)
GCTCCCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGG
CCGGGTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGA
CCACTAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAAAGACTGCCACC
AAGGCTGCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGA
GAAGGCCGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCA
CTGCTAAGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGC
AAGTCCTCCACTACTGCCCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAA
GCTGCCCCCAAGCCTGCTGCTAAGCCGCCAGTCGATCAAGAAATATGTTC
AGGCGAACAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAG
TTCAACAAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCC
CAAGGCTGAAAGAGCGCAATGGTAGCAGATATGATCAAGGATGCTATCCT
GAATATGCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCG
GCTCGAGCCACGCCTCCTACCGTGGCTCCCGCCGTTGTCGACAAGCCCAA
GGTCCTCAAAACCACCAAGAGTGGCCGGGTGACTAAGACGACGGCTAAGC
CTGCAGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTGCTGCAAAGGAG
ACTGCTGCTTAAAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGC
TGCCAAGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCA
AGACCACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCC
AAGGCTAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGCCCCTCCGGA
CCCGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCTAAGCC
GCCAGTCGATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCC
TCCACCAACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGT
TGAGAAGGGCGAGTTCCTTCAGCCCAAGGCTGAAAGAGCGCAATGGTAGC
AGATATGATCAAGGATGCTATCCTGAATATGCCTCCCAAGAAGACTTCCA
CCACCGGCACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCTACCGTGGC
TCCCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCC
GGGTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACC
ACTAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAAAGACTGCCACCAA
GGCTGCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGAGA
AGGCCGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCACT
GCTAAGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGCAA
GTCCTCCACTACTGCCCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAAGC
TGCCCCCAAGCCTGCTGCTAAGCCGCCAGTCGATCAAGAAATATGTTCAG
GCGAACAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTT
CAACAAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCA
AGGCTGAAAGAGCGCAATGGTAGCAGATATGATCAAGGATGCTATCCTGA
ATATGCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGC
TCGAGCCACGCCTCCTACCGTGGCTCCCGCCGTTGTCGACAAGCCCAAGG
TCCTCAAAACCACCAAGAGTGGCCGGGTGACTAAGACGACGGCTAAGCCT
GCAGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTGCTGCAAAGGAGAC
TGCTGCTTAAAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCTG
CCAAGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAAG
ACCACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCAA
GGCTAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGCCCCTCCGGACC
CGTGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCTAAGCCGC
CAGTCGATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCCTC
CACCAACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGTTG
AGAAGGGCGAGTTCCTTCAGCCCAAGGCTGAAAGAGCGCAATGGTAGCAG
ATATGATCAAGGATGCTATCCTGAATATGCCTCCCAAGAAGACTTCCACC
ACCGGCACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCTACCGTGGCTC
CCGCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCCGG
GTGACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACCAC
TAAGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAAAGACTGCCACCAAGG
CTGCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGAGAAG
GCCGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCACTGC
TAAGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGCAAGT
CCTCCACTACTGCCCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAAGCTG
CCCCCAAGCCTGCTGCTAAGCCGCCAGTCGATCAAGAAATATGTTCAGGC
GAACAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTTCA
ACAAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCAAG
GCTGAAAGAGCGCAATGGTAGCAGATATGATCAAGGATGCTATCCTGAAT
ATGCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTC
GAGCCACGCCTCCTACCGTGGCTCCCGCCGTTGTCGACAAGCCCAAGGTC
CTCAAAACCACCAAGAGTGGCCGGGTGACTAAGACGACGGCTAAGCCTGC
AGAGAAGGCCACCAAGAAGACCACTAAGAAGGCTGCTGCAAAGGAGACTG
CTGCTTAAAAGACTGCCACCAAGGCTGCTACTGCTAAGAAGCCTGCTGCC
AAGAAGACCGAGAAGACTGAGAAGGCCGAGAAGGCCGAGAAGCCCAAGAC
CACCAAGAAGGCCACCACCACTGCTAAGAAGCCTGTTGGCAGGCCCAAGG
CTAACACGGCCAAGCCTCGCAAGTCCTCCACTACTGCCCCTCCGGACCCG
TGAAGCTTGCCAAGAAGGAAGCTGCCCCCAAGCCTGCTGCTAAGCCGCCA
GTCGATCAAGAAATATGTTCAGGCGAACAATAAGATTGCTTCTGCCTCCA
CCAACGCCTTCGACAGCCAGTTCAACAAGGCCATCAAGGCTGGTGTTGAG
AAGGGCGAGTTCCTTCAGCCCAAGGCTGAAAGAGCGCAATGGTAGCAGAT
ATGATCAAGGATGCTATCCTGAATATGCCTCCCAAGAAGACTTCCACCAC
CGGCACCACCAAGAAGTCCGGCTCGAGCCACGCCTCCTACCGTGGCTCCC
GCCGTTGTCGACAAGCCCAAGGTCCTCAAAACCACCAAGAGTGGCCGGGT
GACTAAGACGACGGCTAAGCCTGCAGAGAAGGCCACCAAGAAGACCACTA
AGAAGGCTGCTGCAAAGGAGACTGCTGCTTAAAAGACTGCCACCAAGGCT
GCTACTGCTAAGAAGCCTGCTGCCAAGAAGACCGAGAAGACTGAGAAGGC
CGAGAAGGCCGAGAAGCCCAAGACCACCAAGAAGGCCACCACCACTGCTA
AGAAGCCTGTTGGCAGGCCCAAGGCTAACACGGCCAAGCCTCGCAAGTCC
TCCACTACTGCCCCTCCGGACCCGTGAAGCTTGCCAAGAAGGAAGCTGCC
CCCAAGCCTGCTGCTAAGCCGCCAGTCGATCAAGAAATATGTTCAGGCGA
ACAATAAGATTGCTTCTGCCTCCACCAACGCCTTCGACAGCCAGTTCAAC
AAGGCCATCAAGGCTGGTGTTGAGAAGGGCGAGTTCCTTCAGCCCAAGGC
TGAAAGAGCGCAATGGTAGCAGATATGATCAAGGATGCTATCCTGAATAT
GCCTCCCAAGAAGACTTCCACCACCGGCACCACCAAGAAGTCCGGCTCGA
GCCACGCCTCCTACCGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0000786nucleosome
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007334CBS51388_007334Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007334-T1CBS51388_007334-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007334-T1.cdsCBS51388_007334-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007334-T1.exon7CBS51388_007334-T1.exon7Aspergillus niger CBS 513.88exon
CBS51388_007334-T1.exon6CBS51388_007334-T1.exon6Aspergillus niger CBS 513.88exon
CBS51388_007334-T1.exon5CBS51388_007334-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_007334-T1.exon4CBS51388_007334-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007334-T1.exon3CBS51388_007334-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007334-T1.exon2CBS51388_007334-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007334-T1.exon1CBS51388_007334-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR005818
DBxrefInterPro:IPR005819
DBxrefPFAM:PF00538
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2502296..2503582 -
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