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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2508452..2510887+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007336-T1 ID=CBS51388_007336-T1|Name=CBS51388_007336-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2436bp|location=Sequence derived from alignment at An11:2508452..2510887+ (Aspergillus niger CBS 513.88)
ATGAAGCGCAGTCGACTTCATTTCGAGTCTAACGGTGATGCCTCCTCTGC
CGCCTCTCCCCAGAGTACCCGCCCACAGTATACCCCGGAAAATGACTCAC
AGCAGAGCCCGAGACATGTTCCCAAGATCTCGCGCAGAATCCGAGCATGT
ACGGAATGTAAGCGCCATAAGGTCCGCTGTGATATGAATGCGGGGGAGAC
CGTTTGTCAGAGATGTCGCCGCATGGGCCTGGAATGCGTTGTCAACAAAA
GTCTCCAGACGTTACTGGACGACGAGACAGAGTAACTAGACCTCTTCTTT
GGTTTTGATTCGCATAGCTTGCTAAGGGACGATGTGGCTAATTATCTTTG
GTGTACTCTAGATGGAAGGCCACAATAGAGCTCGCAATGGCAGATTTGCT
ACGGAAGGCCCAGCTGCCCGATCTTTCGTATTATCAGACTAACGGAAAGG
CATCGGAGCCACTGTCAAAGAAAAGAGACCGGCAGGATTCTACAGTGTCG
ACAGAGGACACGCCTCATGGGACGGATCACGATTTTGGAGCAGAGCGCCT
CGAGAGCAGCGCGCAGAGAGTCGCACCCGAGTCCAGAACATCCGAAACGA
CCTTCCAACAGTCTTCACAATATGCCCTAGACAGGGAAGAGAATGGAACC
TCATCGCTGGTGACGGCACCGATGGGAAGTCTTTACGAAGTGACACAGTT
GAGCGATATCCAGACAACTTCACCGGGAAGGCATCATGCGCCCGATCGGG
CTCTTGTCACAGATTTCGTTTCACGGGGAGTAGTGGATTTGCACGAGGCG
GAGGAGCTGTTCTCCTACTTTGATCAAGTACTTAGCCGTTATCTATGGGA
TGGGATATTGCTGGACCACAAAGACCTGACCTCCGTGAGGAACTCTTCCT
CAATGCTCTCTGCCGCCATTCTCGCTGTCACAGCCCTTCATTTGCCCAAG
AAAGAACGCACATTCGATATTTGCTATACGGAGTTTGCTAGGTTAGCATC
AGAATCAATGCTAGACAGACACCACACTCTGGATGATCTGCGTGCGTTAT
GTATAGGCGCCTTTTGGCTTGCAGACGTAAGCTGGAAGCTGTCTGGGTAT
GCAGTCCGAATTGCCACGGAGCGCAACCTGCATCAGTCTTACCGGAAAGC
AACACAAGGTTCTCCGGAGCACATAGAACAAGCTAGGCTGTGGTATCTTC
TTTATGTACGTCTCAACGCTACCGAATGTAGCTCTGGTGGGCTTCGTGCA
ACGAGACTGACTGGCCTAGACACTAGAGCATCACTTTTCCATCGCCTACG
GACGACCGCCGATAATCCACGAGGACCAGAGCATCAAAAATCACAATACA
TTCACTCATACCCCTAACGTGCAACAAGGTGACCTGCGTCTACACAGCCA
GGTCGACCTGTTCATCATTCTTACCCGAATATACCACGCCTTTGGGCCCG
ACGTCGACTTGGAGGTTCCCGACAGCGAATTCTCTACAATTGATAAATAT
GACGCTGACCTTGACAAATGGCGGATAGCCTGGTATCCGCGCTTGGGTAC
GTTTTCTGATCCTCAGTCTTTGAACTGGCCACAGTTTTCGCTAATGTGGC
TCAAACGAGCAGTTGGGAGCCGATATGTCGGTGCATATCCTTATAGAGCG
GTTAATCTGCATTATCACTTTTCTCGGTTACAGTTGAATTCGGTTGCTTT
GCGGACCTATCACTCTTCGATATCGACACGACCCATGTCTGCTGAGCGAA
AGAAGCGCGCGAATATAGCCATACAGTCCGCCATCGACACGCTTCAGGTG
GTCCTAGATGAACCCGATATACAGAGGGCTCTGGTTGGCGTTCCACTGTA
CCTCCACAGCATGATCACTTTTGCCGCCGTTTTCCTGCTGAAGATTGCGG
CCAAGGGCTGCTCCAGCAGCATTCCCAACAACCAAGGCCAGCAGAACTCT
ATTTCATCAGCCGGCCTACATATCGACGTCGCGTACGTGCGCGAGCTGGT
TGGGCGGATCGTTAATATGATGGTCTCGTGCAGTAAGCGTGCAAGCGAGC
ACCATCTCAGCCACCACATAGCCCGTGGCTTGCGAAAGATGCTCACAGGG
TTGGAGGAATGGGAGAAGAGGAATCTCGGTAATTCCCAGTCTCTGACACA
GAATTCTCATGATACTCTACCGATGTTTAAACCGGTTGTTATCCCCGGGG
CTCAGCCCCTTGGCGAACGGGATACGATACTGAACCCGCCTCCTCCGTTG
CTGGGGGTCGCTCCCTTGTCTGCCGAGAGAGGGAATAGCTTTGATTCGGA
TGCCACGCAAGCAAAGGCCCAGACGGGCCTCTCCGAGGGGTCGGTGGACC
CTATGATGGCCGATCTCTGGGGCTTTGATGAGGATTACTTCCCGACCGGG
GTGTTTGATTTCCTTCAGTCTCAGATGCCTGCTTGA back to topCoding sequence (CDS) from alignment at An11:2508452..2510887+ >CBS51388_007336-T1 ID=CBS51388_007336-T1|Name=CBS51388_007336-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6876bp|location=Sequence derived from alignment at An11:2508452..2510887+ (Aspergillus niger CBS 513.88)
ATGAAGCGCAGTCGACTTCATTTCGAGTCTAACGGTGATGCCTCCTCTGC
CGCCTCTCCCCAGAGTACCCGCCCACAGTATACCCCGGAAAATGACTCAC
AGCAGAGCCCGAGACATGTTCCCAAGATCTCGCGCAGAATCCGAGCATGT
ACGGAATGTAAGCGCCATAAGGTCCGCTGTGATATGAATGCGGGGGAGAC
CGTTTGTCAGAGATGTCGCCGCATGGGCCTGGAATGCGTTGTCAACAAAA
GTCTCCAGACGTTACTGGACGACGAGACAGAATGGAAGGCCACAATAGAG
CTCGCAATGGCAGATTTGCTACGGAAGGCCCAGCTGCCCGATCTTTCGTA
TTATCAGACTAACGGAAAGGCATCGGAGCCACTGTCAAAGAAAAGAGACC
GGCAGGATTCTACAGTGTCGACAGAGGACACGCCTCATGGGACGGATCAC
GATTTTGGAGCAGAGCGCCTCGAGAGCAGCGCGCAGAGAGTCGCACCCGA
GTCCAGAACATCCGAAACGACCTTCCAACAGTCTTCACAATATGCCCTAG
ACAGGGAAGAGAATGGAACCTCATCGCTGGTGACGGCACCGATGGGAAGT
CTTTACGAAGTGACACAGTTGAGCGATATCCAGACAACTTCACCGGGAAG
GCATCATGCGCCCGATCGGGCTCTTGTCACAGATTTCGTTTCACGGGGAG
TAGTGGATTTGCACGAGGCGGAGGAGCTGTTCTCCTACTTTGATCAAGTA
CTTAGCCGTTATCTATGGGATGGGATATTGCTGGACCACAAAGACCTGAC
CTCCGTGAGGAACTCTTCCTCAATGCTCTCTGCCGCCATTCTCGCTGTCA
CAGCCCTTCATTTGCCCAAGAAAGAACGCACATTCGATATTTGCTATACG
GAGTTTGCTAGGTTAGCATCAGAATCAATGCTAGACAGACACCACACTCT
GGATGATCTGCGTGCGTTATGTATAGGCGCCTTTTGGCTTGCAGACGTAA
GCTGGAAGCTGTCTGGGTATGCAGTCCGAATTGCCACGGAGCGCAACCTG
CATCAGTCTTACCGGAAAGCAACACAAGGTTCTCCGGAGCACATAGAACA
AGCTAGGCTGTGGTATCTTCTTTATACACTAGAGCATCACTTTTCCATCG
CCTACGGACGACCGCCGATAATCCACGAGGACCAGAGCATCAAAAATCAC
AATACATTCACTCATACCCCTAACGTGCAACAAGGTGACCTGCGTCTACA
CAGCCAGGTCGACCTGTTCATCATTCTTACCCGAATATACCACGCCTTTG
GGCCCGACGTCGACTTGGAGGTTCCCGACAGCGAATTCTCTACAATTGAT
AAATATGACGCTGACCTTGACAAATGGCGGATAGCCTGGTATCCGCGCTT
GGGTACGTTTTCTGATCCTCAGTCTTTGAACTGGCCACAGTTTTCGCTAA
TGTGGCTCAAACGAGCAGTTGGGAGCCGATATGTCGGTGCATATCCTTAT
AGAGCGGTTAATCTGCATTATCACTTTTCTCGGTTACAGTTGAATTCGGT
TGCTTTGCGGACCTATCACTCTTCGATATCGACACGACCCATGTCTGCTG
AGCGAAAGAAGCGCGCGAATATAGCCATACAGTCCGCCATCGACACGCTT
CAGGTGGTCCTAGATGAACCCGATATACAGAGGGCTCTGGTTGGCGTTCC
ACTGTACCTCCACAGCATGATCACTTTTGCCGCCGTTTTCCTGCTGAAGA
TTGCGGCCAAGGGCTGCTCCAGCAGCATTCCCAACAACCAAGGCCAGCAG
AACTCTATTTCATCAGCCGGCCTACATATCGACGTCGCGTACGTGCGCGA
GCTGGTTGGGCGGATCGTTAATATGATGGTCTCGTGCAGTAAGCGTGCAA
GCGAGCACCATCTCAGCCACCACATAGCCCGTGGCTTGCGAAAGATGCTC
ACAGGGTTGGAGGAATGGGAGAAGAGGAATCTCGGTAATTCCCAGTCTCT
GACACAGAATTCTCATGATACTCTACCGATGTTTAAACCGGTTGTTATCC
CCGGGGCTCAGCCCCTTGGCGAACGGGATACGATACTGAACCCGCCTCCT
CCGTTGCTGGGGGTCGCTCCCTTGTCTGCCGAGAGAGGGAATAGCTTTGA
TTCGGATGCCACGCAAGCAAAGGCCCAGACGGGCCTCTCCGAGGGGTCGG
TGGACCCTATGATGGCCGATCTCTGGGGCTTTGATGAGGATTACTTCCCG
ACCGGGGTGTTTGATTTCCTTCAGTCTCAGATGCCTGCTTGAATGAAGCG
CAGTCGACTTCATTTCGAGTCTAACGGTGATGCCTCCTCTGCCGCCTCTC
CCCAGAGTACCCGCCCACAGTATACCCCGGAAAATGACTCACAGCAGAGC
CCGAGACATGTTCCCAAGATCTCGCGCAGAATCCGAGCATGTACGGAATG
TAAGCGCCATAAGGTCCGCTGTGATATGAATGCGGGGGAGACCGTTTGTC
AGAGATGTCGCCGCATGGGCCTGGAATGCGTTGTCAACAAAAGTCTCCAG
ACGTTACTGGACGACGAGACAGAATGGAAGGCCACAATAGAGCTCGCAAT
GGCAGATTTGCTACGGAAGGCCCAGCTGCCCGATCTTTCGTATTATCAGA
CTAACGGAAAGGCATCGGAGCCACTGTCAAAGAAAAGAGACCGGCAGGAT
TCTACAGTGTCGACAGAGGACACGCCTCATGGGACGGATCACGATTTTGG
AGCAGAGCGCCTCGAGAGCAGCGCGCAGAGAGTCGCACCCGAGTCCAGAA
CATCCGAAACGACCTTCCAACAGTCTTCACAATATGCCCTAGACAGGGAA
GAGAATGGAACCTCATCGCTGGTGACGGCACCGATGGGAAGTCTTTACGA
AGTGACACAGTTGAGCGATATCCAGACAACTTCACCGGGAAGGCATCATG
CGCCCGATCGGGCTCTTGTCACAGATTTCGTTTCACGGGGAGTAGTGGAT
TTGCACGAGGCGGAGGAGCTGTTCTCCTACTTTGATCAAGTACTTAGCCG
TTATCTATGGGATGGGATATTGCTGGACCACAAAGACCTGACCTCCGTGA
GGAACTCTTCCTCAATGCTCTCTGCCGCCATTCTCGCTGTCACAGCCCTT
CATTTGCCCAAGAAAGAACGCACATTCGATATTTGCTATACGGAGTTTGC
TAGGTTAGCATCAGAATCAATGCTAGACAGACACCACACTCTGGATGATC
TGCGTGCGTTATGTATAGGCGCCTTTTGGCTTGCAGACGTAAGCTGGAAG
CTGTCTGGGTATGCAGTCCGAATTGCCACGGAGCGCAACCTGCATCAGTC
TTACCGGAAAGCAACACAAGGTTCTCCGGAGCACATAGAACAAGCTAGGC
TGTGGTATCTTCTTTATACACTAGAGCATCACTTTTCCATCGCCTACGGA
CGACCGCCGATAATCCACGAGGACCAGAGCATCAAAAATCACAATACATT
CACTCATACCCCTAACGTGCAACAAGGTGACCTGCGTCTACACAGCCAGG
TCGACCTGTTCATCATTCTTACCCGAATATACCACGCCTTTGGGCCCGAC
GTCGACTTGGAGGTTCCCGACAGCGAATTCTCTACAATTGATAAATATGA
CGCTGACCTTGACAAATGGCGGATAGCCTGGTATCCGCGCTTGGGTACGT
TTTCTGATCCTCAGTCTTTGAACTGGCCACAGTTTTCGCTAATGTGGCTC
AAACGAGCAGTTGGGAGCCGATATGTCGGTGCATATCCTTATAGAGCGGT
TAATCTGCATTATCACTTTTCTCGGTTACAGTTGAATTCGGTTGCTTTGC
GGACCTATCACTCTTCGATATCGACACGACCCATGTCTGCTGAGCGAAAG
AAGCGCGCGAATATAGCCATACAGTCCGCCATCGACACGCTTCAGGTGGT
CCTAGATGAACCCGATATACAGAGGGCTCTGGTTGGCGTTCCACTGTACC
TCCACAGCATGATCACTTTTGCCGCCGTTTTCCTGCTGAAGATTGCGGCC
AAGGGCTGCTCCAGCAGCATTCCCAACAACCAAGGCCAGCAGAACTCTAT
TTCATCAGCCGGCCTACATATCGACGTCGCGTACGTGCGCGAGCTGGTTG
GGCGGATCGTTAATATGATGGTCTCGTGCAGTAAGCGTGCAAGCGAGCAC
CATCTCAGCCACCACATAGCCCGTGGCTTGCGAAAGATGCTCACAGGGTT
GGAGGAATGGGAGAAGAGGAATCTCGGTAATTCCCAGTCTCTGACACAGA
ATTCTCATGATACTCTACCGATGTTTAAACCGGTTGTTATCCCCGGGGCT
CAGCCCCTTGGCGAACGGGATACGATACTGAACCCGCCTCCTCCGTTGCT
GGGGGTCGCTCCCTTGTCTGCCGAGAGAGGGAATAGCTTTGATTCGGATG
CCACGCAAGCAAAGGCCCAGACGGGCCTCTCCGAGGGGTCGGTGGACCCT
ATGATGGCCGATCTCTGGGGCTTTGATGAGGATTACTTCCCGACCGGGGT
GTTTGATTTCCTTCAGTCTCAGATGCCTGCTTGAATGAAGCGCAGTCGAC
TTCATTTCGAGTCTAACGGTGATGCCTCCTCTGCCGCCTCTCCCCAGAGT
ACCCGCCCACAGTATACCCCGGAAAATGACTCACAGCAGAGCCCGAGACA
TGTTCCCAAGATCTCGCGCAGAATCCGAGCATGTACGGAATGTAAGCGCC
ATAAGGTCCGCTGTGATATGAATGCGGGGGAGACCGTTTGTCAGAGATGT
CGCCGCATGGGCCTGGAATGCGTTGTCAACAAAAGTCTCCAGACGTTACT
GGACGACGAGACAGAATGGAAGGCCACAATAGAGCTCGCAATGGCAGATT
TGCTACGGAAGGCCCAGCTGCCCGATCTTTCGTATTATCAGACTAACGGA
AAGGCATCGGAGCCACTGTCAAAGAAAAGAGACCGGCAGGATTCTACAGT
GTCGACAGAGGACACGCCTCATGGGACGGATCACGATTTTGGAGCAGAGC
GCCTCGAGAGCAGCGCGCAGAGAGTCGCACCCGAGTCCAGAACATCCGAA
ACGACCTTCCAACAGTCTTCACAATATGCCCTAGACAGGGAAGAGAATGG
AACCTCATCGCTGGTGACGGCACCGATGGGAAGTCTTTACGAAGTGACAC
AGTTGAGCGATATCCAGACAACTTCACCGGGAAGGCATCATGCGCCCGAT
CGGGCTCTTGTCACAGATTTCGTTTCACGGGGAGTAGTGGATTTGCACGA
GGCGGAGGAGCTGTTCTCCTACTTTGATCAAGTACTTAGCCGTTATCTAT
GGGATGGGATATTGCTGGACCACAAAGACCTGACCTCCGTGAGGAACTCT
TCCTCAATGCTCTCTGCCGCCATTCTCGCTGTCACAGCCCTTCATTTGCC
CAAGAAAGAACGCACATTCGATATTTGCTATACGGAGTTTGCTAGGTTAG
CATCAGAATCAATGCTAGACAGACACCACACTCTGGATGATCTGCGTGCG
TTATGTATAGGCGCCTTTTGGCTTGCAGACGTAAGCTGGAAGCTGTCTGG
GTATGCAGTCCGAATTGCCACGGAGCGCAACCTGCATCAGTCTTACCGGA
AAGCAACACAAGGTTCTCCGGAGCACATAGAACAAGCTAGGCTGTGGTAT
CTTCTTTATACACTAGAGCATCACTTTTCCATCGCCTACGGACGACCGCC
GATAATCCACGAGGACCAGAGCATCAAAAATCACAATACATTCACTCATA
CCCCTAACGTGCAACAAGGTGACCTGCGTCTACACAGCCAGGTCGACCTG
TTCATCATTCTTACCCGAATATACCACGCCTTTGGGCCCGACGTCGACTT
GGAGGTTCCCGACAGCGAATTCTCTACAATTGATAAATATGACGCTGACC
TTGACAAATGGCGGATAGCCTGGTATCCGCGCTTGGGTACGTTTTCTGAT
CCTCAGTCTTTGAACTGGCCACAGTTTTCGCTAATGTGGCTCAAACGAGC
AGTTGGGAGCCGATATGTCGGTGCATATCCTTATAGAGCGGTTAATCTGC
ATTATCACTTTTCTCGGTTACAGTTGAATTCGGTTGCTTTGCGGACCTAT
CACTCTTCGATATCGACACGACCCATGTCTGCTGAGCGAAAGAAGCGCGC
GAATATAGCCATACAGTCCGCCATCGACACGCTTCAGGTGGTCCTAGATG
AACCCGATATACAGAGGGCTCTGGTTGGCGTTCCACTGTACCTCCACAGC
ATGATCACTTTTGCCGCCGTTTTCCTGCTGAAGATTGCGGCCAAGGGCTG
CTCCAGCAGCATTCCCAACAACCAAGGCCAGCAGAACTCTATTTCATCAG
CCGGCCTACATATCGACGTCGCGTACGTGCGCGAGCTGGTTGGGCGGATC
GTTAATATGATGGTCTCGTGCAGTAAGCGTGCAAGCGAGCACCATCTCAG
CCACCACATAGCCCGTGGCTTGCGAAAGATGCTCACAGGGTTGGAGGAAT
GGGAGAAGAGGAATCTCGGTAATTCCCAGTCTCTGACACAGAATTCTCAT
GATACTCTACCGATGTTTAAACCGGTTGTTATCCCCGGGGCTCAGCCCCT
TGGCGAACGGGATACGATACTGAACCCGCCTCCTCCGTTGCTGGGGGTCG
CTCCCTTGTCTGCCGAGAGAGGGAATAGCTTTGATTCGGATGCCACGCAA
GCAAAGGCCCAGACGGGCCTCTCCGAGGGGTCGGTGGACCCTATGATGGC
CGATCTCTGGGGCTTTGATGAGGATTACTTCCCGACCGGGGTGTTTGATT
TCCTTCAGTCTCAGATGCCTGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2508452..2510887 + |
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