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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2523277..2524110- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007340-T1 ID=CBS51388_007340-T1|Name=CBS51388_007340-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=834bp|location=Sequence derived from alignment at An11:2523277..2524110- (Aspergillus niger CBS 513.88)
ATGGTTGCTGACTCGGTTGAACCTGCAGGGACGCAATCCTGCCCTCCCCC
CGAATTGCCCCAGCTCGTTGCGGAACAGCACACTCCCATCCCTGCTCATG
ACAAAGAGACCCAGCGTCTGATTGTCGTTCTCTCCCATGCCAGCTTGGAA
ACCTATCGGGCTTCCAGCGGACGCAATGGTTCCGGTCGTGATGAGAAGTA
CTCCCTGCTCAACAGCGATGAACACATTGGTGTCATGCGCAAGATGAACC
GGGATATCAGCGAGGCTCGCCCGGATATCACACATCAGGTTGGTTGCTCT
GTCTGGGATAGCCAACAACGGCTTGGTGGATGGTTGCTAATGATATATGC
TTGTTAGTGCCTGCTCACCCTGCTCGACTCCCCCGTGAACAAGGCGGGTA
AGCTGCAGATCTTCATCCACACTGCCAAGGGTGTCTTGATCGAGGTGAAC
CCTAGCGTGCGCATTCCTCGTACCTTCAAGCGATTCGCTGGTTTGATGGT
ACAGCTGTTGCACCGCCTCTCCATCCGTTCCACCAACTCCCAGGAGAAGC
TCCTGAAGGTCATCAAGAACCCCATCACCGACCACCTTCCCCCCAACTGC
CGCAAGGTGACCCTCAGTTTCGAAGCCCCCGTGGTGCGCACCCGCGACTA
CATCGAATCGCTAGGCCCCAAGGAGAGCGTCTGTATCTTCGTAGGTGCCA
TGGCCAAGGGACACGATGACTTTGCCGACTCCTTCAAGGATGACACGATT
TCCATCAGTAACTACAGCTTGAGTGCCAGTGTCGCATGCAGCAAGTTCTG
CCATGCCGCCGAGGAGGTGTGGGACATTGTCTGA back to topCoding sequence (CDS) from alignment at An11:2523277..2524110- >CBS51388_007340-T1 ID=CBS51388_007340-T1|Name=CBS51388_007340-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1530bp|location=Sequence derived from alignment at An11:2523277..2524110- (Aspergillus niger CBS 513.88)
TGCCTGCTCACCCTGCTCGACTCCCCCGTGAACAAGGCGGGTAAGCTGCA
GATCTTCATCCACACTGCCAAGGGTGTCTTGATCGAGGTGAACCCTAGCG
TGCGCATTCCTCGTACCTTCAAGCGATTCGCTGGTTTGATGGTACAGCTG
TTGCACCGCCTCTCCATCCGTTCCACCAACTCCCAGGAGAAGCTCCTGAA
GGTCATCAAGAACCCCATCACCGACCACCTTCCCCCCAACTGCCGCAAGG
TGACCCTCAGTTTCGAAGCCCCCGTGGTGCGCACCCGCGACTACATCGAA
TCGCTAGGCCCCAAGGAGAGCGTCTGTATCTTCGTAGGTGCCATGGCCAA
GGGACACGATGACTTTGCCGACTCCTTCAAGGATGACACGATTTCCATCA
GTAACTACAGCTTGAGTGCCAGTGTCGCATGCAGCAAGTTCTGCCATGCC
GCCGAGGAGGTGTGGGACATTGTCTGAATGGTTGCTGACTCGGTTGAACC
TGCAGGGACGCAATCCTGCCCTCCCCCCGAATTGCCCCAGCTCGTTGCGG
AACAGCACACTCCCATCCCTGCTCATGACAAAGAGACCCAGCGTCTGATT
GTCGTTCTCTCCCATGCCAGCTTGGAAACCTATCGGGCTTCCAGCGGACG
CAATGGTTCCGGTCGTGATGAGAAGTACTCCCTGCTCAACAGCGATGAAC
ACATTGGTGTCATGCGCAAGATGAACCGGGATATCAGCGAGGCTCGCCCG
GATATCACACATCAGTGCCTGCTCACCCTGCTCGACTCCCCCGTGAACAA
GGCGGGTAAGCTGCAGATCTTCATCCACACTGCCAAGGGTGTCTTGATCG
AGGTGAACCCTAGCGTGCGCATTCCTCGTACCTTCAAGCGATTCGCTGGT
TTGATGGTACAGCTGTTGCACCGCCTCTCCATCCGTTCCACCAACTCCCA
GGAGAAGCTCCTGAAGGTCATCAAGAACCCCATCACCGACCACCTTCCCC
CCAACTGCCGCAAGGTGACCCTCAGTTTCGAAGCCCCCGTGGTGCGCACC
CGCGACTACATCGAATCGCTAGGCCCCAAGGAGAGCGTCTGTATCTTCGT
AGGTGCCATGGCCAAGGGACACGATGACTTTGCCGACTCCTTCAAGGATG
ACACGATTTCCATCAGTAACTACAGCTTGAGTGCCAGTGTCGCATGCAGC
AAGTTCTGCCATGCCGCCGAGGAGGTGTGGGACATTGTCTGAATGGTTGC
TGACTCGGTTGAACCTGCAGGGACGCAATCCTGCCCTCCCCCCGAATTGC
CCCAGCTCGTTGCGGAACAGCACACTCCCATCCCTGCTCATGACAAAGAG
ACCCAGCGTCTGATTGTCGTTCTCTCCCATGCCAGCTTGGAAACCTATCG
GGCTTCCAGCGGACGCAATGGTTCCGGTCGTGATGAGAAGTACTCCCTGC
TCAACAGCGATGAACACATTGGTGTCATGCGCAAGATGAACCGGGATATC
AGCGAGGCTCGCCCGGATATCACACATCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008168 | methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263DFA |
| DBxref | InterPro:IPR029028 |
| DBxref | InterPro:IPR029026 |
| DBxref | InterPro:IPR005304 |
| DBxref | PFAM:PF03587 |
| Product | 18S rRNA pseudouridine methyltransferase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2523277..2524110 - |
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