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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2546348..2548384- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007348-T1 ID=CBS51388_007348-T1|Name=CBS51388_007348-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2037bp|location=Sequence derived from alignment at An11:2546348..2548384- (Aspergillus niger CBS 513.88)
ATGCCGTCCTTTCCATCTCGACCTCTAGTCCGGCCGAGGGACGATGGACT
CCAGTTAAGGTAGATTCGTGTTCTATTCTAGACCATAACAGCAACATCGT
GCTTACGGGACACTCCATCTAGCTATCAACTGCCTCATCGTGTACACGCA
GCTACAGGCTACCCCCTCCTGGCCCCCAATGGCTCGTCGATCGTTGTTTA
CGGTTATGAGACTGGACTGAAGGTAGTCTGGAGGGGAGGAAGACACTTTT
CCACCGAGAAGCCTTCTGCCCCGAAAGTGGACAAACCGCAGAAAGCCAGC
AACGCCAATGATGATGCGGTCATGATTATTGATTCCGATGAGGAGAGCAT
GGCGGAGACCCAGCAGACTCAGCAAGATGAAGAGCCAACCTACCAGTTCG
AAGAGGACGAAACCGAGGTGGACCCCTTCCACCCTTACGACGATGTCTTG
CGCCAGCTTGATATACCCCTTGGAAGCAGAGTCCTCCAGCTGGCTGTGCC
TCGTGTCCTCCCCGAAACAGCGCGCTCTTCGCTCGATCCATTTCCCCCGG
CTTTGAAGAAGGACATCATCATCGCCGCTGTGTGCGCAGACTATTCTACT
CGCATTGTAACTCTGCCTTTGCTGCCCCCTCACCCTACGCAAAGCGACTT
CAGCATTCAGACGATCTCAATTAGTGGTGGAGTATCACACCAGGAGATCC
CGCGGGGAGTTAGCATCGCCTTCACCTATCAAGAAATTGATCAGCAAGAT
CAGGATACATCTTCAAACCATGGTTCATCCCGCTCGTCTACAGGAAGGTG
GGACCTCCTCGTCGCAACACATTCGGCTGAGTCGTCTGGTCTCTTGATCA
TTCATCGGATTCCGGTCGCAGAGGAGGAGAAGGCGCGCGGCACTGCATAT
CGTTTATGCGATGATGAGATTGAGACTAAGCGACGGCACTTGCCCGCCCC
TGCTGTGAATATCTCTTTCAATCCCTCGGGTTACCCTGCCCTTCGACACT
CCACGTTGCTAGTTGCGTTCCACAGCGGCTGTGTCAAGGTATACTCTTGC
TTCTCCACGAAACCACTCAAAGCCTCGCGGAGGTCGTCCGGTGCCCAGAG
CGAATTTGAGACCGTCGACACGGAAGGGAAATGGTTGATCAGTCTGTACC
CCGGTTTTGAGCAATCTGCTTCGGGACTCCCTCGACGGAAGATCATCACT
CACGCAGAATGGGTGCTTGGAGGGCGTGCCATCTTGGTCCTCACGTCGGA
TGGCGAATGGGGTGTCTGGGATTTGGAAGGGGCTGGCCCCGGGACCATCA
AAGGTCCGCTTCAGCGACAGTCCAGTGTGCAGGGAGTAACAGGTGGTTCA
CTGACAACGTTTTCCGTCAGCGGTCGGATTCTGAGTCCCCTGCCTGGCGC
CAGTCGTTCTGAGACAAGCGGACCTTCCTTCGAACAACGGCCCAAATTTG
CGCCCTTGACGCCGTCTACGAAGCGTCTGCGCGAAGACACGCTGCTCAAA
GGCGCCTCCGTTGGAACAGCCAGCCCATCCCTGAGTGGAGGGATCTCAGT
GTATCAGACTAACTCCTGGAGGGACGCGCTGCCCGATGAATCGATTTTGC
TGCAGCATGGAAACCAAAGCGCAGTCATTCCCAGTCTGCTCTCCTTGTGG
CGCAACGCTGTCAAGGCTAGTGGCACCTTCGATTCATCCAACCGCTGCCG
GGTGTCTCCCCTCCAAGATATCACCCTAGTGGGTGAGCGCCTGAAAGGCA
TCGGACACCTCCCTGCGGCGACCCGCTCTACTCGCACACAGCCATTTGAT
ATGCTTCTCACGGCCGAACATCGACTTGTGATCCTCGCCCCACGGTTGAC
TGAGCCAGCACCAGCACCCGTTACCGAATACATCCCCGAGCCCGCCACTC
AGGAAACAGACCAGCAGATGCTCCAAAGGGGGCAGCTCGGCGTGGAAGGA
ATGGACCGACTCCTTAGTGGCATGGCGAGCACGAATCGCTCACTCCGTAT
GGGAAGTCCCATCAAGCGAGCGCGGGTCTTCACTTAA back to topCoding sequence (CDS) from alignment at An11:2546348..2548384- >CBS51388_007348-T1 ID=CBS51388_007348-T1|Name=CBS51388_007348-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3948bp|location=Sequence derived from alignment at An11:2546348..2548384- (Aspergillus niger CBS 513.88)
CTATCAACTGCCTCATCGTGTACACGCAGCTACAGGCTACCCCCTCCTGG
CCCCCAATGGCTCGTCGATCGTTGTTTACGGTTATGAGACTGGACTGAAG
GTAGTCTGGAGGGGAGGAAGACACTTTTCCACCGAGAAGCCTTCTGCCCC
GAAAGTGGACAAACCGCAGAAAGCCAGCAACGCCAATGATGATGCGGTCA
TGATTATTGATTCCGATGAGGAGAGCATGGCGGAGACCCAGCAGACTCAG
CAAGATGAAGAGCCAACCTACCAGTTCGAAGAGGACGAAACCGAGGTGGA
CCCCTTCCACCCTTACGACGATGTCTTGCGCCAGCTTGATATACCCCTTG
GAAGCAGAGTCCTCCAGCTGGCTGTGCCTCGTGTCCTCCCCGAAACAGCG
CGCTCTTCGCTCGATCCATTTCCCCCGGCTTTGAAGAAGGACATCATCAT
CGCCGCTGTGTGCGCAGACTATTCTACTCGCATTGTAACTCTGCCTTTGC
TGCCCCCTCACCCTACGCAAAGCGACTTCAGCATTCAGACGATCTCAATT
AGTGGTGGAGTATCACACCAGGAGATCCCGCGGGGAGTTAGCATCGCCTT
CACCTATCAAGAAATTGATCAGCAAGATCAGGATACATCTTCAAACCATG
GTTCATCCCGCTCGTCTACAGGAAGGTGGGACCTCCTCGTCGCAACACAT
TCGGCTGAGTCGTCTGGTCTCTTGATCATTCATCGGATTCCGGTCGCAGA
GGAGGAGAAGGCGCGCGGCACTGCATATCGTTTATGCGATGATGAGATTG
AGACTAAGCGACGGCACTTGCCCGCCCCTGCTGTGAATATCTCTTTCAAT
CCCTCGGGTTACCCTGCCCTTCGACACTCCACGTTGCTAGTTGCGTTCCA
CAGCGGCTGTGTCAAGGTATACTCTTGCTTCTCCACGAAACCACTCAAAG
CCTCGCGGAGGTCGTCCGGTGCCCAGAGCGAATTTGAGACCGTCGACACG
GAAGGGAAATGGTTGATCAGTCTGTACCCCGGTTTTGAGCAATCTGCTTC
GGGACTCCCTCGACGGAAGATCATCACTCACGCAGAATGGGTGCTTGGAG
GGCGTGCCATCTTGGTCCTCACGTCGGATGGCGAATGGGGTGTCTGGGAT
TTGGAAGGGGCTGGCCCCGGGACCATCAAAGGTCCGCTTCAGCGACAGTC
CAGTGTGCAGGGAGTAACAGGTGGTTCACTGACAACGTTTTCCGTCAGCG
GTCGGATTCTGAGTCCCCTGCCTGGCGCCAGTCGTTCTGAGACAAGCGGA
CCTTCCTTCGAACAACGGCCCAAATTTGCGCCCTTGACGCCGTCTACGAA
GCGTCTGCGCGAAGACACGCTGCTCAAAGGCGCCTCCGTTGGAACAGCCA
GCCCATCCCTGAGTGGAGGGATCTCAGTGTATCAGACTAACTCCTGGAGG
GACGCGCTGCCCGATGAATCGATTTTGCTGCAGCATGGAAACCAAAGCGC
AGTCATTCCCAGTCTGCTCTCCTTGTGGCGCAACGCTGTCAAGGCTAGTG
GCACCTTCGATTCATCCAACCGCTGCCGGGTGTCTCCCCTCCAAGATATC
ACCCTAGTGGGTGAGCGCCTGAAAGGCATCGGACACCTCCCTGCGGCGAC
CCGCTCTACTCGCACACAGCCATTTGATATGCTTCTCACGGCCGAACATC
GACTTGTGATCCTCGCCCCACGGTTGACTGAGCCAGCACCAGCACCCGTT
ACCGAATACATCCCCGAGCCCGCCACTCAGGAAACAGACCAGCAGATGCT
CCAAAGGGGGCAGCTCGGCGTGGAAGGAATGGACCGACTCCTTAGTGGCA
TGGCGAGCACGAATCGCTCACTCCGTATGGGAAGTCCCATCAAGCGAGCG
CGGGTCTTCACTTAAATGCCGTCCTTTCCATCTCGACCTCTAGTCCGGCC
GAGGGACGATGGACTCCAGTTAAGCTATCAACTGCCTCATCGTGTACACG
CAGCTACAGGCTACCCCCTCCTGGCCCCCAATGGCTCGTCGATCGTTGTT
TACGGTTATGAGACTGGACTGAAGGTAGTCTGGAGGGGAGGAAGACACTT
TTCCACCGAGAAGCCTTCTGCCCCGAAAGTGGACAAACCGCAGAAAGCCA
GCAACGCCAATGATGATGCGGTCATGATTATTGATTCCGATGAGGAGAGC
ATGGCGGAGACCCAGCAGACTCAGCAAGATGAAGAGCCAACCTACCAGTT
CGAAGAGGACGAAACCGAGGTGGACCCCTTCCACCCTTACGACGATGTCT
TGCGCCAGCTTGATATACCCCTTGGAAGCAGAGTCCTCCAGCTGGCTGTG
CCTCGTGTCCTCCCCGAAACAGCGCGCTCTTCGCTCGATCCATTTCCCCC
GGCTTTGAAGAAGGACATCATCATCGCCGCTGTGTGCGCAGACTATTCTA
CTCGCATTGTAACTCTGCCTTTGCTGCCCCCTCACCCTACGCAAAGCGAC
TTCAGCATTCAGACGATCTCAATTAGTGGTGGAGTATCACACCAGGAGAT
CCCGCGGGGAGTTAGCATCGCCTTCACCTATCAAGAAATTGATCAGCAAG
ATCAGGATACATCTTCAAACCATGGTTCATCCCGCTCGTCTACAGGAAGG
TGGGACCTCCTCGTCGCAACACATTCGGCTGAGTCGTCTGGTCTCTTGAT
CATTCATCGGATTCCGGTCGCAGAGGAGGAGAAGGCGCGCGGCACTGCAT
ATCGTTTATGCGATGATGAGATTGAGACTAAGCGACGGCACTTGCCCGCC
CCTGCTGTGAATATCTCTTTCAATCCCTCGGGTTACCCTGCCCTTCGACA
CTCCACGTTGCTAGTTGCGTTCCACAGCGGCTGTGTCAAGGTATACTCTT
GCTTCTCCACGAAACCACTCAAAGCCTCGCGGAGGTCGTCCGGTGCCCAG
AGCGAATTTGAGACCGTCGACACGGAAGGGAAATGGTTGATCAGTCTGTA
CCCCGGTTTTGAGCAATCTGCTTCGGGACTCCCTCGACGGAAGATCATCA
CTCACGCAGAATGGGTGCTTGGAGGGCGTGCCATCTTGGTCCTCACGTCG
GATGGCGAATGGGGTGTCTGGGATTTGGAAGGGGCTGGCCCCGGGACCAT
CAAAGGTCCGCTTCAGCGACAGTCCAGTGTGCAGGGAGTAACAGGTGGTT
CACTGACAACGTTTTCCGTCAGCGGTCGGATTCTGAGTCCCCTGCCTGGC
GCCAGTCGTTCTGAGACAAGCGGACCTTCCTTCGAACAACGGCCCAAATT
TGCGCCCTTGACGCCGTCTACGAAGCGTCTGCGCGAAGACACGCTGCTCA
AAGGCGCCTCCGTTGGAACAGCCAGCCCATCCCTGAGTGGAGGGATCTCA
GTGTATCAGACTAACTCCTGGAGGGACGCGCTGCCCGATGAATCGATTTT
GCTGCAGCATGGAAACCAAAGCGCAGTCATTCCCAGTCTGCTCTCCTTGT
GGCGCAACGCTGTCAAGGCTAGTGGCACCTTCGATTCATCCAACCGCTGC
CGGGTGTCTCCCCTCCAAGATATCACCCTAGTGGGTGAGCGCCTGAAAGG
CATCGGACACCTCCCTGCGGCGACCCGCTCTACTCGCACACAGCCATTTG
ATATGCTTCTCACGGCCGAACATCGACTTGTGATCCTCGCCCCACGGTTG
ACTGAGCCAGCACCAGCACCCGTTACCGAATACATCCCCGAGCCCGCCAC
TCAGGAAACAGACCAGCAGATGCTCCAAAGGGGGCAGCTCGGCGTGGAAG
GAATGGACCGACTCCTTAGTGGCATGGCGAGCACGAATCGCTCACTCCGT
ATGGGAAGTCCCATCAAGCGAGCGCGGGTCTTCACTTAAATGCCGTCCTT
TCCATCTCGACCTCTAGTCCGGCCGAGGGACGATGGACTCCAGTTAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2546348..2548384 - |
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