You are here

Home

CBS51388_007354-T1, CBS51388_007354-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007354-T1
Unique NameCBS51388_007354-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2567422..2570446+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007354-T1 ID=CBS51388_007354-T1|Name=CBS51388_007354-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3025bp|location=Sequence derived from alignment at An11:2567422..2570446+ (Aspergillus niger CBS 513.88)
ATGGCGGCCATGGAGGAGCTGGAGATCCACAGCAAGGTATGTTGACAATG
AAGCAAGGGGGTGGAGGGGATGGATACATGACACGCCGGATTAATGATTG
AATGATGGCATTGGACTAACTTCTGCCCTCTGTTGCCCCTCTCTACAGTC
CTACTTTGTCCGCTGGGTATCGGTCAAGCCCGCCCACACCATCTCCTGGA
GTATCCAACCGCACAAGAAGTCCATCAACTTTGGCATCTTCAAACATCCC
GGCCATTCGGCCGTTCTGGGCTCCAACACCAACTTACCAGCCACCGATTC
CCCCAATGCCGATTCCAACGAGAACCTGCCAGCGACCGCTAGCGCTGCGG
CCTCGCGACCCAATGCCTCCGTCATTGAGAAGCTGACAGGAATTGGCCTC
AAGCAGATCCAATGGATCGGCAAATGCGAGGCTGAACGCATCTTCCGCGG
TACCTACGACGTACCCGCCAATGAAGGCGGGAATTACGCCCTGGTCTTTG
ACAATACCTTCTCCAAGCAACTCTCCAAAACCGTCACTCTCGCCCTGCTC
ACCTACCCAACCGCCCTCCCACCGCAGTCGGTCCCCGTCCCTCATGCCTC
CAGCCATCCCATACGCTCCGATACCGCTGAATCCGGAAAGACCCTGGCTG
GCCGCCGACGGGGCAACAGCGTCGCTCAGCCGCCGCCTCTCGCCAGCGAC
CCGGACTCTCTCAATACCTATACGGGCGTGCTTCAGAAGCGACGGCGGAA
GCGCCATCAGGGCTGGGCGCGTCGCTTCTTCTCCCTCGACTACACCTCGT
CGACCTTGTCTTACTACCACGATCGCAACTCTGCCGCGCTTCGCGGGTCC
ATCCCCTTGTCGCTAGCCGCGGTTGCGTGCAACGAGAAGTCGCGCGAGAT
TTCCATCGACTCCGGCACCGAAGTCTGGCACCTTCGCGCCAACAATGACC
AGGAATTCATCGCTTGGAAGCGGGCGCTGGAGCGGGCCTCCGCCCCGTCT
TCCAAGACTCCTGCCACCGCTACCGACGACACCACCCTGCCGTCCGAACC
CCTGTTACGCGTGCCCTCCCAACGTGTCGTCCCGAACGCCGTTGAGGAAC
GGGAATGGGAACGAGTCGAGAGCCTCGTGAGCAAGGTATCCGGGTCGCGC
GATGCTGTCCGGCGCCTGGCCAAGGACACCGATCCCAAGTACCTGGGCGG
CAATGTCGCGGAGAAACCGTGCGGTCGCTCGCCCAGCCCGCATCGCACGC
CCACGGATCTGAATGGAGACGAGTCTGGGGACGCCAAACGCCCGTTCTGG
AAGCGCAAGAATAGTACGGCCACGCAGCCCGGCGTCAAGCGCACCACCAC
CATGGCCTCCATGTCTTCGCAGCTGGCCGTTCCGGGCGCTTTTGAGACTG
CGTCTCTGGCGGGCGATCGCAAGCCCAGCAGCATCGCCAGCCCCCCGGAT
CCCATGGAGGAGGTCCATGAACATCTCATGGCCGTGTTGCGTGACCTGGA
CCAGGTCGTCAGCGAGTTCTCAACCCTCATCTCCGAAAGCAAGCAGCGAC
GACACCCTCCGGGCGCGACCGTGCAGGTGCGGCGCAGCTTCGAGTCCGAC
GTGTCCCAGGAATTTTTCGATGCAGATGACGGCAATGCGCTTCTCACAAT
CAAGGGCGACAGCGAGGACGAGGCAGCGGCCGACAACGCCTCCGACCACA
CCGTATGGGACTCGAAACCCAAGGCAGAAGAAGAACCTATGGCCGACGAT
GCTCCCTCTGACAGTGAGGATGAGGCTGACGAGACGCCTGCTGGACACGA
TCAATTCTCGCCGCTCTTCCCCGGCCGACCCAAAACGCTCACGCCGCTCC
CACTCAGTCCCGTGAAGCGTCGTGCCAACATCACGGCGCCGACGGTCATG
CCGCCCAGTCTGATTGGCTTCCTCCGTAAGAACGTTGGCAAGGACCTGTC
GCAAATCTCCATGCCCGTTTCCTCCAACGAGCCCCTGTCGCTGCTCCAGC
GCGCCGCCGAAGTTCTGGAGTACTCCACTCTGCTCGACCGCGCCGCCAGC
GCCTCCGACCCCGTTGAACGCCTCATGTACGTGACCGCATTTGCCCTTTC
TCCCATCTCCAGCAACCGGATCCGTGAGCGCGCCATTCGCAAACCGTTCA
ACCCCATGCTCGGCGAGACCTACGAGCTCGTCCGTGAAGACCTTGGCTTC
CGGTTTATCGCCGAGAAGGTTTCGCATCGCCCTGTCCAGCTTGCCTACCA
AGCCGACAGCAAAGACTGGAGCCTCACGCAATCCCCCATGCCGACGCAGA
AATTCTGGGGTAAATCCGCCGAAATTATCACCGAAGGCAAGATGCGCCTG
ACCCTCCACACCACCGGCGAACATTTCAGCTGGTCCCAGGCCACCTCGTT
CCTACGCAACATCATCGCCGGCGAGAAATACGTCGAACCCGTCGGCGAAA
TGGTCGTGATGAACGAAACCACCGGCCACCGCTCCCTCACCACCTTCAAA
GCCGGCGGCATGTTCTCCGGCCGCAGCGAAGAAGTCACCACCAAATCCAC
GGACCCCTCCGGCCGTGACCTGCCCCTCGGTCTCACCGGCACCTGGACCT
CCTCCCTCGACCTCACTAAGAACGGCAACCCTTCGGGAACCATCTGGAGT
GCCGGACCCCTGGTCCCCAACGCGCCCAAACACTACGGTCTCACAGCCTT
CGCGGCGACCTTGAACGAGGTCACCTCTATCGAGGACGGCAAACTCCCCG
TCACCGACTCACGACTCCGTCCGGACCAGCGCGCCCTCGAAGACGGCGAC
GTCGACCAAGCCGAAGCAGTCAAGGTCCAGTTGGAAGAAGGCCAACGCGC
GCGTCGTCGCGAGATGGAAGCCGCAGGCGAGTCCTGGACACCGCGATGGT
TCACACCCGTAGATGACGCATCGGGAGATGCATCCGTGTGGCGACTGAAG
TCTGGGAAGGATGGATACTGGGAGGAACGGAGTAAGGCCGCCTGGACGGG
CGTGGTGCCGGTTTTTACGAAGTAA
back to top

Coding sequence (CDS) from alignment at An11:2567422..2570446+

>CBS51388_007354-T1 ID=CBS51388_007354-T1|Name=CBS51388_007354-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5826bp|location=Sequence derived from alignment at An11:2567422..2570446+ (Aspergillus niger CBS 513.88)
ATGGCGGCCATGGAGGAGCTGGAGATCCACAGCAAGTCCTACTTTGTCCG
CTGGGTATCGGTCAAGCCCGCCCACACCATCTCCTGGAGTATCCAACCGC
ACAAGAAGTCCATCAACTTTGGCATCTTCAAACATCCCGGCCATTCGGCC
GTTCTGGGCTCCAACACCAACTTACCAGCCACCGATTCCCCCAATGCCGA
TTCCAACGAGAACCTGCCAGCGACCGCTAGCGCTGCGGCCTCGCGACCCA
ATGCCTCCGTCATTGAGAAGCTGACAGGAATTGGCCTCAAGCAGATCCAA
TGGATCGGCAAATGCGAGGCTGAACGCATCTTCCGCGGTACCTACGACGT
ACCCGCCAATGAAGGCGGGAATTACGCCCTGGTCTTTGACAATACCTTCT
CCAAGCAACTCTCCAAAACCGTCACTCTCGCCCTGCTCACCTACCCAACC
GCCCTCCCACCGCAGTCGGTCCCCGTCCCTCATGCCTCCAGCCATCCCAT
ACGCTCCGATACCGCTGAATCCGGAAAGACCCTGGCTGGCCGCCGACGGG
GCAACAGCGTCGCTCAGCCGCCGCCTCTCGCCAGCGACCCGGACTCTCTC
AATACCTATACGGGCGTGCTTCAGAAGCGACGGCGGAAGCGCCATCAGGG
CTGGGCGCGTCGCTTCTTCTCCCTCGACTACACCTCGTCGACCTTGTCTT
ACTACCACGATCGCAACTCTGCCGCGCTTCGCGGGTCCATCCCCTTGTCG
CTAGCCGCGGTTGCGTGCAACGAGAAGTCGCGCGAGATTTCCATCGACTC
CGGCACCGAAGTCTGGCACCTTCGCGCCAACAATGACCAGGAATTCATCG
CTTGGAAGCGGGCGCTGGAGCGGGCCTCCGCCCCGTCTTCCAAGACTCCT
GCCACCGCTACCGACGACACCACCCTGCCGTCCGAACCCCTGTTACGCGT
GCCCTCCCAACGTGTCGTCCCGAACGCCGTTGAGGAACGGGAATGGGAAC
GAGTCGAGAGCCTCGTGAGCAAGGTATCCGGGTCGCGCGATGCTGTCCGG
CGCCTGGCCAAGGACACCGATCCCAAGTACCTGGGCGGCAATGTCGCGGA
GAAACCGTGCGGTCGCTCGCCCAGCCCGCATCGCACGCCCACGGATCTGA
ATGGAGACGAGTCTGGGGACGCCAAACGCCCGTTCTGGAAGCGCAAGAAT
AGTACGGCCACGCAGCCCGGCGTCAAGCGCACCACCACCATGGCCTCCAT
GTCTTCGCAGCTGGCCGTTCCGGGCGCTTTTGAGACTGCGTCTCTGGCGG
GCGATCGCAAGCCCAGCAGCATCGCCAGCCCCCCGGATCCCATGGAGGAG
GTCCATGAACATCTCATGGCCGTGTTGCGTGACCTGGACCAGGTCGTCAG
CGAGTTCTCAACCCTCATCTCCGAAAGCAAGCAGCGACGACACCCTCCGG
GCGCGACCGTGCAGGTGCGGCGCAGCTTCGAGTCCGACGTGTCCCAGGAA
TTTTTCGATGCAGATGACGGCAATGCGCTTCTCACAATCAAGGGCGACAG
CGAGGACGAGGCAGCGGCCGACAACGCCTCCGACCACACCGTATGGGACT
CGAAACCCAAGGCAGAAGAAGAACCTATGGCCGACGATGCTCCCTCTGAC
AGTGAGGATGAGGCTGACGAGACGCCTGCTGGACACGATCAATTCTCGCC
GCTCTTCCCCGGCCGACCCAAAACGCTCACGCCGCTCCCACTCAGTCCCG
TGAAGCGTCGTGCCAACATCACGGCGCCGACGGTCATGCCGCCCAGTCTG
ATTGGCTTCCTCCGTAAGAACGTTGGCAAGGACCTGTCGCAAATCTCCAT
GCCCGTTTCCTCCAACGAGCCCCTGTCGCTGCTCCAGCGCGCCGCCGAAG
TTCTGGAGTACTCCACTCTGCTCGACCGCGCCGCCAGCGCCTCCGACCCC
GTTGAACGCCTCATGTACGTGACCGCATTTGCCCTTTCTCCCATCTCCAG
CAACCGGATCCGTGAGCGCGCCATTCGCAAACCGTTCAACCCCATGCTCG
GCGAGACCTACGAGCTCGTCCGTGAAGACCTTGGCTTCCGGTTTATCGCC
GAGAAGGTTTCGCATCGCCCTGTCCAGCTTGCCTACCAAGCCGACAGCAA
AGACTGGAGCCTCACGCAATCCCCCATGCCGACGCAGAAATTCTGGGGTA
AATCCGCCGAAATTATCACCGAAGGCAAGATGCGCCTGACCCTCCACACC
ACCGGCGAACATTTCAGCTGGTCCCAGGCCACCTCGTTCCTACGCAACAT
CATCGCCGGCGAGAAATACGTCGAACCCGTCGGCGAAATGGTCGTGATGA
ACGAAACCACCGGCCACCGCTCCCTCACCACCTTCAAAGCCGGCGGCATG
TTCTCCGGCCGCAGCGAAGAAGTCACCACCAAATCCACGGACCCCTCCGG
CCGTGACCTGCCCCTCGGTCTCACCGGCACCTGGACCTCCTCCCTCGACC
TCACTAAGAACGGCAACCCTTCGGGAACCATCTGGAGTGCCGGACCCCTG
GTCCCCAACGCGCCCAAACACTACGGTCTCACAGCCTTCGCGGCGACCTT
GAACGAGGTCACCTCTATCGAGGACGGCAAACTCCCCGTCACCGACTCAC
GACTCCGTCCGGACCAGCGCGCCCTCGAAGACGGCGACGTCGACCAAGCC
GAAGCAGTCAAGGTCCAGTTGGAAGAAGGCCAACGCGCGCGTCGTCGCGA
GATGGAAGCCGCAGGCGAGTCCTGGACACCGCGATGGTTCACACCCGTAG
ATGACGCATCGGGAGATGCATCCGTGTGGCGACTGAAGTCTGGGAAGGAT
GGATACTGGGAGGAACGGAGTAAGGCCGCCTGGACGGGCGTGGTGCCGGT
TTTTACGAAGTAAATGGCGGCCATGGAGGAGCTGGAGATCCACAGCAAGT
CCTACTTTGTCCGCTGGGTATCGGTCAAGCCCGCCCACACCATCTCCTGG
AGTATCCAACCGCACAAGAAGTCCATCAACTTTGGCATCTTCAAACATCC
CGGCCATTCGGCCGTTCTGGGCTCCAACACCAACTTACCAGCCACCGATT
CCCCCAATGCCGATTCCAACGAGAACCTGCCAGCGACCGCTAGCGCTGCG
GCCTCGCGACCCAATGCCTCCGTCATTGAGAAGCTGACAGGAATTGGCCT
CAAGCAGATCCAATGGATCGGCAAATGCGAGGCTGAACGCATCTTCCGCG
GTACCTACGACGTACCCGCCAATGAAGGCGGGAATTACGCCCTGGTCTTT
GACAATACCTTCTCCAAGCAACTCTCCAAAACCGTCACTCTCGCCCTGCT
CACCTACCCAACCGCCCTCCCACCGCAGTCGGTCCCCGTCCCTCATGCCT
CCAGCCATCCCATACGCTCCGATACCGCTGAATCCGGAAAGACCCTGGCT
GGCCGCCGACGGGGCAACAGCGTCGCTCAGCCGCCGCCTCTCGCCAGCGA
CCCGGACTCTCTCAATACCTATACGGGCGTGCTTCAGAAGCGACGGCGGA
AGCGCCATCAGGGCTGGGCGCGTCGCTTCTTCTCCCTCGACTACACCTCG
TCGACCTTGTCTTACTACCACGATCGCAACTCTGCCGCGCTTCGCGGGTC
CATCCCCTTGTCGCTAGCCGCGGTTGCGTGCAACGAGAAGTCGCGCGAGA
TTTCCATCGACTCCGGCACCGAAGTCTGGCACCTTCGCGCCAACAATGAC
CAGGAATTCATCGCTTGGAAGCGGGCGCTGGAGCGGGCCTCCGCCCCGTC
TTCCAAGACTCCTGCCACCGCTACCGACGACACCACCCTGCCGTCCGAAC
CCCTGTTACGCGTGCCCTCCCAACGTGTCGTCCCGAACGCCGTTGAGGAA
CGGGAATGGGAACGAGTCGAGAGCCTCGTGAGCAAGGTATCCGGGTCGCG
CGATGCTGTCCGGCGCCTGGCCAAGGACACCGATCCCAAGTACCTGGGCG
GCAATGTCGCGGAGAAACCGTGCGGTCGCTCGCCCAGCCCGCATCGCACG
CCCACGGATCTGAATGGAGACGAGTCTGGGGACGCCAAACGCCCGTTCTG
GAAGCGCAAGAATAGTACGGCCACGCAGCCCGGCGTCAAGCGCACCACCA
CCATGGCCTCCATGTCTTCGCAGCTGGCCGTTCCGGGCGCTTTTGAGACT
GCGTCTCTGGCGGGCGATCGCAAGCCCAGCAGCATCGCCAGCCCCCCGGA
TCCCATGGAGGAGGTCCATGAACATCTCATGGCCGTGTTGCGTGACCTGG
ACCAGGTCGTCAGCGAGTTCTCAACCCTCATCTCCGAAAGCAAGCAGCGA
CGACACCCTCCGGGCGCGACCGTGCAGGTGCGGCGCAGCTTCGAGTCCGA
CGTGTCCCAGGAATTTTTCGATGCAGATGACGGCAATGCGCTTCTCACAA
TCAAGGGCGACAGCGAGGACGAGGCAGCGGCCGACAACGCCTCCGACCAC
ACCGTATGGGACTCGAAACCCAAGGCAGAAGAAGAACCTATGGCCGACGA
TGCTCCCTCTGACAGTGAGGATGAGGCTGACGAGACGCCTGCTGGACACG
ATCAATTCTCGCCGCTCTTCCCCGGCCGACCCAAAACGCTCACGCCGCTC
CCACTCAGTCCCGTGAAGCGTCGTGCCAACATCACGGCGCCGACGGTCAT
GCCGCCCAGTCTGATTGGCTTCCTCCGTAAGAACGTTGGCAAGGACCTGT
CGCAAATCTCCATGCCCGTTTCCTCCAACGAGCCCCTGTCGCTGCTCCAG
CGCGCCGCCGAAGTTCTGGAGTACTCCACTCTGCTCGACCGCGCCGCCAG
CGCCTCCGACCCCGTTGAACGCCTCATGTACGTGACCGCATTTGCCCTTT
CTCCCATCTCCAGCAACCGGATCCGTGAGCGCGCCATTCGCAAACCGTTC
AACCCCATGCTCGGCGAGACCTACGAGCTCGTCCGTGAAGACCTTGGCTT
CCGGTTTATCGCCGAGAAGGTTTCGCATCGCCCTGTCCAGCTTGCCTACC
AAGCCGACAGCAAAGACTGGAGCCTCACGCAATCCCCCATGCCGACGCAG
AAATTCTGGGGTAAATCCGCCGAAATTATCACCGAAGGCAAGATGCGCCT
GACCCTCCACACCACCGGCGAACATTTCAGCTGGTCCCAGGCCACCTCGT
TCCTACGCAACATCATCGCCGGCGAGAAATACGTCGAACCCGTCGGCGAA
ATGGTCGTGATGAACGAAACCACCGGCCACCGCTCCCTCACCACCTTCAA
AGCCGGCGGCATGTTCTCCGGCCGCAGCGAAGAAGTCACCACCAAATCCA
CGGACCCCTCCGGCCGTGACCTGCCCCTCGGTCTCACCGGCACCTGGACC
TCCTCCCTCGACCTCACTAAGAACGGCAACCCTTCGGGAACCATCTGGAG
TGCCGGACCCCTGGTCCCCAACGCGCCCAAACACTACGGTCTCACAGCCT
TCGCGGCGACCTTGAACGAGGTCACCTCTATCGAGGACGGCAAACTCCCC
GTCACCGACTCACGACTCCGTCCGGACCAGCGCGCCCTCGAAGACGGCGA
CGTCGACCAAGCCGAAGCAGTCAAGGTCCAGTTGGAAGAAGGCCAACGCG
CGCGTCGTCGCGAGATGGAAGCCGCAGGCGAGTCCTGGACACCGCGATGG
TTCACACCCGTAGATGACGCATCGGGAGATGCATCCGTGTGGCGACTGAA
GTCTGGGAAGGATGGATACTGGGAGGAACGGAGTAAGGCCGCCTGGACGG
GCGTGGTGCCGGTTTTTACGAAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007354CBS51388_007354Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007354-T1.exon1CBS51388_007354-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007354-T1.exon2CBS51388_007354-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007354-T1.cdsCBS51388_007354-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007354-T1CBS51388_007354-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261QYO
DBxrefInterPro:IPR037239
DBxrefInterPro:IPR036598
DBxrefInterPro:IPR009038
DBxrefInterPro:IPR041680
DBxrefInterPro:IPR000648
DBxrefInterPro:IPR011993
DBxrefInterPro:IPR001849
DBxrefPFAM:PF15409
DBxrefPFAM:PF00169
DBxrefPFAM:PF01237
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2567422..2570446 +
Powered by Drupal