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CBS51388_007356-T1, CBS51388_007356-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007356-T1
Unique NameCBS51388_007356-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2573463..2574695-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007356-T1 ID=CBS51388_007356-T1|Name=CBS51388_007356-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1233bp|location=Sequence derived from alignment at An11:2573463..2574695- (Aspergillus niger CBS 513.88)
ATGGCCATTACTATTCTCCCTCCGGTTGTGGAGGATGTCGACGTTCCCTA
CTCCGACTCGGAGGACGATGCCATGTCCGTGGATTCAGATGGAGGAGTAG
ATCTCGCAGCGGGAGATGCCACAAGACCTAACAAGCGTCCTCGCTTAGTG
GAAGGAACAAATATTGGCGCAGGAGTCCTCACACCGGGTGAGATCGTAAC
AGATGACCCGCAATGGATGAGGTTGGTTTGGCCCAACTGCTATATTAGCT
CAACGCGCAATTGATTGACACTTGACCGCAGAGGACACGGCACATACACT
AACCCACTATCTACCTCCATCATTGCTACCGTCGCCGGTACAGTTCAGAA
GACCAACAAATTGCTCTCCGTCCAGCCCCTTCGGGCTCGTTATACGCCTG
AGATCGGTGACCTGGTGGTGGGGCGTATTGTCGAGGTGCAGTCTCGGCGA
TGGAAGGTTGACGTCGCTGCTCCCCTTCTCGCACAGCTTCCTCTCTCCGC
TATCAACTTGCCCGGTGGTATCCTGCGTCGACGAACGAGCGCCGATGAAC
TACAAATCCGAACCTTCTTCAGCGAGGGTGACCTCGTCGTTGCTGAAGTC
CAGACGGTACATTCCGACGGAGGCGCATCGTTGCACACCCGGTCGCTGAA
GTATGGTAAATTGAGGAACGGCGTGTTCCTTGCGGTGACGGGGACAGGTG
GCAGTGGTGCGTCTAGCTCGTCAGTCAAAGGTACTTCTGGGGCGAGTGCT
ACGGGCGCGGGAGCCGGAGGTGCAGCGGGTGCTGGTGGAGTGGTTCGGTC
GCGCAGACAGGTCTGGACGATCAATACAGCCAATGGGGGTGGGGATGTAG
ATGTGATTTTGGGAGTTAATGGGTACATTTGGATTTCGAAGCACGCCGAC
GGAGCGGCTGCTGCATCGTCGACGACGGAAAACGTGTCAATCACGCGCAT
GGAGGAGATGGTGTCGAGCTCCATCTACTCGAGTCAGAACGATGATATTC
CGCCACAGACGCGTCGGGAGATCGCCCGGTTGGCGCAGTGCATTCGGGTG
CTTGTCAACGGAGGAGTCCGGGTGGACGAGGAGACGGTGATGGGAGCCTA
TGAAGCCAGCTTACAGGTGGATCTAGAAGTGGGCGATGAGGAAGATGATG
AAGATCGGGGCAAGGAGGGACGAGAATATCTGGAGGGCGACAAGGCTCGC
CGAATTCTAGATTTGGTGCTACAACAACTATAG
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Coding sequence (CDS) from alignment at An11:2573463..2574695-

>CBS51388_007356-T1 ID=CBS51388_007356-T1|Name=CBS51388_007356-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2346bp|location=Sequence derived from alignment at An11:2573463..2574695- (Aspergillus niger CBS 513.88)
AGGACACGGCACATACACTAACCCACTATCTACCTCCATCATTGCTACCG
TCGCCGGTACAGTTCAGAAGACCAACAAATTGCTCTCCGTCCAGCCCCTT
CGGGCTCGTTATACGCCTGAGATCGGTGACCTGGTGGTGGGGCGTATTGT
CGAGGTGCAGTCTCGGCGATGGAAGGTTGACGTCGCTGCTCCCCTTCTCG
CACAGCTTCCTCTCTCCGCTATCAACTTGCCCGGTGGTATCCTGCGTCGA
CGAACGAGCGCCGATGAACTACAAATCCGAACCTTCTTCAGCGAGGGTGA
CCTCGTCGTTGCTGAAGTCCAGACGGTACATTCCGACGGAGGCGCATCGT
TGCACACCCGGTCGCTGAAGTATGGTAAATTGAGGAACGGCGTGTTCCTT
GCGGTGACGGGGACAGGTGGCAGTGGTGCGTCTAGCTCGTCAGTCAAAGG
TACTTCTGGGGCGAGTGCTACGGGCGCGGGAGCCGGAGGTGCAGCGGGTG
CTGGTGGAGTGGTTCGGTCGCGCAGACAGGTCTGGACGATCAATACAGCC
AATGGGGGTGGGGATGTAGATGTGATTTTGGGAGTTAATGGGTACATTTG
GATTTCGAAGCACGCCGACGGAGCGGCTGCTGCATCGTCGACGACGGAAA
ACGTGTCAATCACGCGCATGGAGGAGATGGTGTCGAGCTCCATCTACTCG
AGTCAGAACGATGATATTCCGCCACAGACGCGTCGGGAGATCGCCCGGTT
GGCGCAGTGCATTCGGGTGCTTGTCAACGGAGGAGTCCGGGTGGACGAGG
AGACGGTGATGGGAGCCTATGAAGCCAGCTTACAGGTGGATCTAGAAGTG
GGCGATGAGGAAGATGATGAAGATCGGGGCAAGGAGGGACGAGAATATCT
GGAGGGCGACAAGGCTCGCCGAATTCTAGATTTGGTGCTACAACAACTAT
AGATGGCCATTACTATTCTCCCTCCGGTTGTGGAGGATGTCGACGTTCCC
TACTCCGACTCGGAGGACGATGCCATGTCCGTGGATTCAGATGGAGGAGT
AGATCTCGCAGCGGGAGATGCCACAAGACCTAACAAGCGTCCTCGCTTAG
TGGAAGGAACAAATATTGGCGCAGGAGTCCTCACACCGGGTGAGATCGTA
ACAGATGACCCGCAATGGATGAGAGGACACGGCACATACACTAACCCACT
ATCTACCTCCATCATTGCTACCGTCGCCGGTACAGTTCAGAAGACCAACA
AATTGCTCTCCGTCCAGCCCCTTCGGGCTCGTTATACGCCTGAGATCGGT
GACCTGGTGGTGGGGCGTATTGTCGAGGTGCAGTCTCGGCGATGGAAGGT
TGACGTCGCTGCTCCCCTTCTCGCACAGCTTCCTCTCTCCGCTATCAACT
TGCCCGGTGGTATCCTGCGTCGACGAACGAGCGCCGATGAACTACAAATC
CGAACCTTCTTCAGCGAGGGTGACCTCGTCGTTGCTGAAGTCCAGACGGT
ACATTCCGACGGAGGCGCATCGTTGCACACCCGGTCGCTGAAGTATGGTA
AATTGAGGAACGGCGTGTTCCTTGCGGTGACGGGGACAGGTGGCAGTGGT
GCGTCTAGCTCGTCAGTCAAAGGTACTTCTGGGGCGAGTGCTACGGGCGC
GGGAGCCGGAGGTGCAGCGGGTGCTGGTGGAGTGGTTCGGTCGCGCAGAC
AGGTCTGGACGATCAATACAGCCAATGGGGGTGGGGATGTAGATGTGATT
TTGGGAGTTAATGGGTACATTTGGATTTCGAAGCACGCCGACGGAGCGGC
TGCTGCATCGTCGACGACGGAAAACGTGTCAATCACGCGCATGGAGGAGA
TGGTGTCGAGCTCCATCTACTCGAGTCAGAACGATGATATTCCGCCACAG
ACGCGTCGGGAGATCGCCCGGTTGGCGCAGTGCATTCGGGTGCTTGTCAA
CGGAGGAGTCCGGGTGGACGAGGAGACGGTGATGGGAGCCTATGAAGCCA
GCTTACAGGTGGATCTAGAAGTGGGCGATGAGGAAGATGATGAAGATCGG
GGCAAGGAGGGACGAGAATATCTGGAGGGCGACAAGGCTCGCCGAATTCT
AGATTTGGTGCTACAACAACTATAGATGGCCATTACTATTCTCCCTCCGG
TTGTGGAGGATGTCGACGTTCCCTACTCCGACTCGGAGGACGATGCCATG
TCCGTGGATTCAGATGGAGGAGTAGATCTCGCAGCGGGAGATGCCACAAG
ACCTAACAAGCGTCCTCGCTTAGTGGAAGGAACAAATATTGGCGCAGGAG
TCCTCACACCGGGTGAGATCGTAACAGATGACCCGCAATGGATGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007356CBS51388_007356Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007356-T1CBS51388_007356-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007356-T1.cdsCBS51388_007356-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007356-T1.exon2CBS51388_007356-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007356-T1.exon1CBS51388_007356-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263IQ5
DBxrefInterPro:IPR036612
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR025721
DBxrefPFAM:PF14382
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2573463..2574695 -
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