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CBS51388_007357-T1, CBS51388_007357-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007357-T1
Unique NameCBS51388_007357-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2575328..2576485-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007357-T1 ID=CBS51388_007357-T1|Name=CBS51388_007357-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1158bp|location=Sequence derived from alignment at An11:2575328..2576485- (Aspergillus niger CBS 513.88)
ATGTCGCATACCATTGATGATACTCATTCCGTGACTGAAAGTTTACCGGA
TGCCCCCGGGGGCGCCCCTACGAAGCAGTCCTACCGATCATTCAAGTGAG
TGATCCCCTGAAAGCCTGGGGCGGCGCGTTGCTAATTCGACCGATCTACC
ATCCAGGAAGAAGTTTGCGAAGCTTAAGGTCAAGTTTGAGCTTCAGATGC
GAGAGAGCGAGTCCCTCATCCGCGAAGGGTTGCGTATCGAGGATCTGTCC
AAGAGGATTCAGGCACAGAATGAGTATGTTGCGCGCCCAACGTCTATGAC
TTCTCGGTCGCTTACAATTGATCAACCCACAGTCAGCTCCTAGAAGTCCT
GCTAGAGTTCAACGATAGTCTCCATGTGTCTCCAAGTATGCGGTACGATC
TGAGCGCGCCGGAAGATGAATCCTTCTTACCACCACCCGAGCGAGACATT
CCGAAATCGTACAATGACCCTGTCGTAGCGAGCTCTGTTCTACAAGAAGC
CAAGGCCAGACTGGCTGCTGGACGTTTGTCCAGCGATGCTTATCGTGAGG
TGGAGGATGATGTTAAGCGCGGTCAGGCTTTTGCACCGCGTATGCAGTAC
AGCACTCTGTCGACATTCCCCCATTCTGCGCCTTTGCAGCCAGACAATCC
CGACGACTGGAATCCCGCGCAAGAACTTGGATTTCTTACTCCCGAATATG
AGACCGAATACTGCCTGGCTCTAGATGCTAAACTGGGCGACGACGAGGCT
CTGGAGCAGCTCGAGTGCGTTCCTAAGAAGCCATCACTAGCGGAACGCGA
GAGAGAGGCCGCTCTTCGGAGCCATGTCTCTGTACACAATTGGTTGCGCC
AGAACCAACCCCAAATATTCTTGCAGGATAACGAGAACGCCTCGGAAAAG
TCCGGCTCTCGACCCTCCAATCTACGCACTTCTAAGAGGGCGCCGGCTCA
ATCACGCAAAGAGGAGGATGTGTATGATGATGACAGTATCCTGGAAACTG
CGTCAACCTCTGGAGGTACGAGAGGCAAGCGCAAGCGCGATGAAGATACC
GGATATCGACCCAAGGGCGGTAGCAGTCGCTCAAACCGGAAGAAGAAGGA
TGAGGAAAATGCGACCCCCAAACGGCCGTCGAAGCGGTCTTCGGGCGTCG
GTGCCTAA
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Coding sequence (CDS) from alignment at An11:2575328..2576485-

>CBS51388_007357-T1 ID=CBS51388_007357-T1|Name=CBS51388_007357-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3114bp|location=Sequence derived from alignment at An11:2575328..2576485- (Aspergillus niger CBS 513.88)
TCAGCTCCTAGAAGTCCTGCTAGAGTTCAACGATAGTCTCCATGTGTCTC
CAAGTATGCGGTACGATCTGAGCGCGCCGGAAGATGAATCCTTCTTACCA
CCACCCGAGCGAGACATTCCGAAATCGTACAATGACCCTGTCGTAGCGAG
CTCTGTTCTACAAGAAGCCAAGGCCAGACTGGCTGCTGGACGTTTGTCCA
GCGATGCTTATCGTGAGGTGGAGGATGATGTTAAGCGCGGTCAGGCTTTT
GCACCGCGTATGCAGTACAGCACTCTGTCGACATTCCCCCATTCTGCGCC
TTTGCAGCCAGACAATCCCGACGACTGGAATCCCGCGCAAGAACTTGGAT
TTCTTACTCCCGAATATGAGACCGAATACTGCCTGGCTCTAGATGCTAAA
CTGGGCGACGACGAGGCTCTGGAGCAGCTCGAGTGCGTTCCTAAGAAGCC
ATCACTAGCGGAACGCGAGAGAGAGGCCGCTCTTCGGAGCCATGTCTCTG
TACACAATTGGTTGCGCCAGAACCAACCCCAAATATTCTTGCAGGATAAC
GAGAACGCCTCGGAAAAGTCCGGCTCTCGACCCTCCAATCTACGCACTTC
TAAGAGGGCGCCGGCTCAATCACGCAAAGAGGAGGATGTGTATGATGATG
ACAGTATCCTGGAAACTGCGTCAACCTCTGGAGGTACGAGAGGCAAGCGC
AAGCGCGATGAAGATACCGGATATCGACCCAAGGGCGGTAGCAGTCGCTC
AAACCGGAAGAAGAAGGATGAGGAAAATGCGACCCCCAAACGGCCGTCGA
AGCGGTCTTCGGGCGTCGGTGCCTAAGAAGAAGTTTGCGAAGCTTAAGGT
CAAGTTTGAGCTTCAGATGCGAGAGAGCGAGTCCCTCATCCGCGAAGGGT
TGCGTATCGAGGATCTGTCCAAGAGGATTCAGGCACAGAATGAATGTCGC
ATACCATTGATGATACTCATTCCGTGACTGAAAGTTTACCGGATGCCCCC
GGGGGCGCCCCTACGAAGCAGTCCTACCGATCATTCAATCAGCTCCTAGA
AGTCCTGCTAGAGTTCAACGATAGTCTCCATGTGTCTCCAAGTATGCGGT
ACGATCTGAGCGCGCCGGAAGATGAATCCTTCTTACCACCACCCGAGCGA
GACATTCCGAAATCGTACAATGACCCTGTCGTAGCGAGCTCTGTTCTACA
AGAAGCCAAGGCCAGACTGGCTGCTGGACGTTTGTCCAGCGATGCTTATC
GTGAGGTGGAGGATGATGTTAAGCGCGGTCAGGCTTTTGCACCGCGTATG
CAGTACAGCACTCTGTCGACATTCCCCCATTCTGCGCCTTTGCAGCCAGA
CAATCCCGACGACTGGAATCCCGCGCAAGAACTTGGATTTCTTACTCCCG
AATATGAGACCGAATACTGCCTGGCTCTAGATGCTAAACTGGGCGACGAC
GAGGCTCTGGAGCAGCTCGAGTGCGTTCCTAAGAAGCCATCACTAGCGGA
ACGCGAGAGAGAGGCCGCTCTTCGGAGCCATGTCTCTGTACACAATTGGT
TGCGCCAGAACCAACCCCAAATATTCTTGCAGGATAACGAGAACGCCTCG
GAAAAGTCCGGCTCTCGACCCTCCAATCTACGCACTTCTAAGAGGGCGCC
GGCTCAATCACGCAAAGAGGAGGATGTGTATGATGATGACAGTATCCTGG
AAACTGCGTCAACCTCTGGAGGTACGAGAGGCAAGCGCAAGCGCGATGAA
GATACCGGATATCGACCCAAGGGCGGTAGCAGTCGCTCAAACCGGAAGAA
GAAGGATGAGGAAAATGCGACCCCCAAACGGCCGTCGAAGCGGTCTTCGG
GCGTCGGTGCCTAAGAAGAAGTTTGCGAAGCTTAAGGTCAAGTTTGAGCT
TCAGATGCGAGAGAGCGAGTCCCTCATCCGCGAAGGGTTGCGTATCGAGG
ATCTGTCCAAGAGGATTCAGGCACAGAATGAATGTCGCATACCATTGATG
ATACTCATTCCGTGACTGAAAGTTTACCGGATGCCCCCGGGGGCGCCCCT
ACGAAGCAGTCCTACCGATCATTCAATCAGCTCCTAGAAGTCCTGCTAGA
GTTCAACGATAGTCTCCATGTGTCTCCAAGTATGCGGTACGATCTGAGCG
CGCCGGAAGATGAATCCTTCTTACCACCACCCGAGCGAGACATTCCGAAA
TCGTACAATGACCCTGTCGTAGCGAGCTCTGTTCTACAAGAAGCCAAGGC
CAGACTGGCTGCTGGACGTTTGTCCAGCGATGCTTATCGTGAGGTGGAGG
ATGATGTTAAGCGCGGTCAGGCTTTTGCACCGCGTATGCAGTACAGCACT
CTGTCGACATTCCCCCATTCTGCGCCTTTGCAGCCAGACAATCCCGACGA
CTGGAATCCCGCGCAAGAACTTGGATTTCTTACTCCCGAATATGAGACCG
AATACTGCCTGGCTCTAGATGCTAAACTGGGCGACGACGAGGCTCTGGAG
CAGCTCGAGTGCGTTCCTAAGAAGCCATCACTAGCGGAACGCGAGAGAGA
GGCCGCTCTTCGGAGCCATGTCTCTGTACACAATTGGTTGCGCCAGAACC
AACCCCAAATATTCTTGCAGGATAACGAGAACGCCTCGGAAAAGTCCGGC
TCTCGACCCTCCAATCTACGCACTTCTAAGAGGGCGCCGGCTCAATCACG
CAAAGAGGAGGATGTGTATGATGATGACAGTATCCTGGAAACTGCGTCAA
CCTCTGGAGGTACGAGAGGCAAGCGCAAGCGCGATGAAGATACCGGATAT
CGACCCAAGGGCGGTAGCAGTCGCTCAAACCGGAAGAAGAAGGATGAGGA
AAATGCGACCCCCAAACGGCCGTCGAAGCGGTCTTCGGGCGTCGGTGCCT
AAGAAGAAGTTTGCGAAGCTTAAGGTCAAGTTTGAGCTTCAGATGCGAGA
GAGCGAGTCCCTCATCCGCGAAGGGTTGCGTATCGAGGATCTGTCCAAGA
GGATTCAGGCACAGAATGAATGTCGCATACCATTGATGATACTCATTCCG
TGACTGAAAGTTTACCGGATGCCCCCGGGGGCGCCCCTACGAAGCAGTCC
TACCGATCATTCAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0031011Ino80 complex
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007357CBS51388_007357Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007357-T1CBS51388_007357-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007357-T1.cdsCBS51388_007357-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007357-T1.exon3CBS51388_007357-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007357-T1.exon2CBS51388_007357-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007357-T1.exon1CBS51388_007357-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR032742
DBxrefPFAM:PF14612
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2575328..2576485 -
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