|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2599850..2600882+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007366-T1 ID=CBS51388_007366-T1|Name=CBS51388_007366-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1033bp|location=Sequence derived from alignment at An11:2599850..2600882+ (Aspergillus niger CBS 513.88)
ATGACGGCACGCCAATCATCACCTACATCAGACCACTCACATTCGGACGG
CAATGTCCGCAAGAGGGTCTGTAAGGCTTGCGATCGGTGTAGACTGAAGA
AATCCAAGGTAAGCCAAGCCATGGCTCAGCATCAGCTTGTCCTGATGCAC
TGACCCGGTGCAGTGTGACGGATCCAACCCATGTGGTCGGTGCAGGACAG
ATAATGCCATCTGTGTCTTTGGCGAGAGGAAGAAGGCTCACGACAAAGTG
TACCCCAAGGGGTGAGCTTGCACCCATTCGACATGTTGTATCAATCGCTA
ACCTGGCTCTCCGCCGCCTTTTAGATATGTCGAGATGCTTGAACAACAAC
AAACGTGGCTGGTCAATGGCCTTCAAGAAATGTACCGTCGCGCCTTGGAG
GGTGAAGGCTGGCCGGGAGAGCCCTTGAAATGCGAGCCCAACGGCCATCC
TCTAACGCACGATCTGCTTACACGACTCGGCGCTTTGGACCAGACCAAGG
GTGAGCGCTTCGAAGAGAACACCGAGGCCATGCAGCAAGATCTCTGGAGG
CAGAATTCCGGACACATGCAACGCCAGGAGTCATCCGATGGTAGCTCAGA
AAGCGCGCAGTCACCTATCATGCCCTCCCGCTTCTCAGACCCGTTTGCTC
GCCAGCTCTCGAGTACACAATCCAGCTTCAGCACACCGTCCCAAACGCAA
GGTCCCACTATCAAATCAGAGCCTCAAATGGCACCGACGAATCCCGCCTT
CGTTGCGCCCATGACCATGCAAGGGGTGGTGAACCCCCTCGCCCTTCAGA
CCCCGCAACAATGGCCCAACAATAACTTTGGCGCTTTCGACGATATGGAT
CTAATAGGCGCTTCCGACTATACGAATTTGTCCTTTGACGACCAGGTTCC
CTCGCCAATGTTCAACCGTCAACTACCGATGAGCTGCATGCTTTCCTCTT
CCTCGTATATGGACACAAAGGGTGACTATGAAGACATCAATCAGTTCTTA
AATGCCAATGCGCCCGAGATTGCATCGACCTGA back to topCoding sequence (CDS) from alignment at An11:2599850..2600882+ >CBS51388_007366-T1 ID=CBS51388_007366-T1|Name=CBS51388_007366-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2745bp|location=Sequence derived from alignment at An11:2599850..2600882+ (Aspergillus niger CBS 513.88)
ATGACGGCACGCCAATCATCACCTACATCAGACCACTCACATTCGGACGG
CAATGTCCGCAAGAGGGTCTGTAAGGCTTGCGATCGGTGTAGACTGAAGA
AATCCAAGTGTGACGGATCCAACCCATGTGGTCGGTGCAGGACAGATAAT
GCCATCTGTGTCTTTGGCGAGAGGAAGAAGGCTCACGACAAAGTGTACCC
CAAGGGATATGTCGAGATGCTTGAACAACAACAAACGTGGCTGGTCAATG
GCCTTCAAGAAATGTACCGTCGCGCCTTGGAGGGTGAAGGCTGGCCGGGA
GAGCCCTTGAAATGCGAGCCCAACGGCCATCCTCTAACGCACGATCTGCT
TACACGACTCGGCGCTTTGGACCAGACCAAGGGTGAGCGCTTCGAAGAGA
ACACCGAGGCCATGCAGCAAGATCTCTGGAGGCAGAATTCCGGACACATG
CAACGCCAGGAGTCATCCGATGGTAGCTCAGAAAGCGCGCAGTCACCTAT
CATGCCCTCCCGCTTCTCAGACCCGTTTGCTCGCCAGCTCTCGAGTACAC
AATCCAGCTTCAGCACACCGTCCCAAACGCAAGGTCCCACTATCAAATCA
GAGCCTCAAATGGCACCGACGAATCCCGCCTTCGTTGCGCCCATGACCAT
GCAAGGGGTGGTGAACCCCCTCGCCCTTCAGACCCCGCAACAATGGCCCA
ACAATAACTTTGGCGCTTTCGACGATATGGATCTAATAGGCGCTTCCGAC
TATACGAATTTGTCCTTTGACGACCAGGTTCCCTCGCCAATGTTCAACCG
TCAACTACCGATGAGCTGCATGCTTTCCTCTTCCTCGTATATGGACACAA
AGGGTGACTATGAAGACATCAATCAGTTCTTAAATGCCAATGCGCCCGAG
ATTGCATCGACCTGAATGACGGCACGCCAATCATCACCTACATCAGACCA
CTCACATTCGGACGGCAATGTCCGCAAGAGGGTCTGTAAGGCTTGCGATC
GGTGTAGACTGAAGAAATCCAAGTGTGACGGATCCAACCCATGTGGTCGG
TGCAGGACAGATAATGCCATCTGTGTCTTTGGCGAGAGGAAGAAGGCTCA
CGACAAAGTGTACCCCAAGGGATATGTCGAGATGCTTGAACAACAACAAA
CGTGGCTGGTCAATGGCCTTCAAGAAATGTACCGTCGCGCCTTGGAGGGT
GAAGGCTGGCCGGGAGAGCCCTTGAAATGCGAGCCCAACGGCCATCCTCT
AACGCACGATCTGCTTACACGACTCGGCGCTTTGGACCAGACCAAGGGTG
AGCGCTTCGAAGAGAACACCGAGGCCATGCAGCAAGATCTCTGGAGGCAG
AATTCCGGACACATGCAACGCCAGGAGTCATCCGATGGTAGCTCAGAAAG
CGCGCAGTCACCTATCATGCCCTCCCGCTTCTCAGACCCGTTTGCTCGCC
AGCTCTCGAGTACACAATCCAGCTTCAGCACACCGTCCCAAACGCAAGGT
CCCACTATCAAATCAGAGCCTCAAATGGCACCGACGAATCCCGCCTTCGT
TGCGCCCATGACCATGCAAGGGGTGGTGAACCCCCTCGCCCTTCAGACCC
CGCAACAATGGCCCAACAATAACTTTGGCGCTTTCGACGATATGGATCTA
ATAGGCGCTTCCGACTATACGAATTTGTCCTTTGACGACCAGGTTCCCTC
GCCAATGTTCAACCGTCAACTACCGATGAGCTGCATGCTTTCCTCTTCCT
CGTATATGGACACAAAGGGTGACTATGAAGACATCAATCAGTTCTTAAAT
GCCAATGCGCCCGAGATTGCATCGACCTGAATGACGGCACGCCAATCATC
ACCTACATCAGACCACTCACATTCGGACGGCAATGTCCGCAAGAGGGTCT
GTAAGGCTTGCGATCGGTGTAGACTGAAGAAATCCAAGTGTGACGGATCC
AACCCATGTGGTCGGTGCAGGACAGATAATGCCATCTGTGTCTTTGGCGA
GAGGAAGAAGGCTCACGACAAAGTGTACCCCAAGGGATATGTCGAGATGC
TTGAACAACAACAAACGTGGCTGGTCAATGGCCTTCAAGAAATGTACCGT
CGCGCCTTGGAGGGTGAAGGCTGGCCGGGAGAGCCCTTGAAATGCGAGCC
CAACGGCCATCCTCTAACGCACGATCTGCTTACACGACTCGGCGCTTTGG
ACCAGACCAAGGGTGAGCGCTTCGAAGAGAACACCGAGGCCATGCAGCAA
GATCTCTGGAGGCAGAATTCCGGACACATGCAACGCCAGGAGTCATCCGA
TGGTAGCTCAGAAAGCGCGCAGTCACCTATCATGCCCTCCCGCTTCTCAG
ACCCGTTTGCTCGCCAGCTCTCGAGTACACAATCCAGCTTCAGCACACCG
TCCCAAACGCAAGGTCCCACTATCAAATCAGAGCCTCAAATGGCACCGAC
GAATCCCGCCTTCGTTGCGCCCATGACCATGCAAGGGGTGGTGAACCCCC
TCGCCCTTCAGACCCCGCAACAATGGCCCAACAATAACTTTGGCGCTTTC
GACGATATGGATCTAATAGGCGCTTCCGACTATACGAATTTGTCCTTTGA
CGACCAGGTTCCCTCGCCAATGTTCAACCGTCAACTACCGATGAGCTGCA
TGCTTTCCTCTTCCTCGTATATGGACACAAAGGGTGACTATGAAGACATC
AATCAGTTCTTAAATGCCAATGCGCCCGAGATTGCATCGACCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2599850..2600882 + |
|
