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CBS51388_007367-T1, CBS51388_007367-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007367-T1
Unique NameCBS51388_007367-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2604825..2605878+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007367-T1 ID=CBS51388_007367-T1|Name=CBS51388_007367-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1054bp|location=Sequence derived from alignment at An11:2604825..2605878+ (Aspergillus niger CBS 513.88)
ATGGGCGACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCA
GGAATTCAACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAG
AAGCCTACGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGC
GTCGCTAACCGCACCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCA
ATATCAACTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTC
GTGGATGGGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGAT
GGAAAGACCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGG
ATACCCAGGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGG
TGGAGAATGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAG
TTGGTGGGCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAG
GTATGTCTGTCACATTTAATCTAAATCACTGAAGCGATAGGATACTGATT
ATCTCAAACAGCTACTTCAACCTCAACGGTGGCCCAACCACCGAAGGCAC
CATCACCAAACTATCAACACAGGACTACCTACCCCTAGAGAACGGCATCC
CATTGGGCCCCATTGAGCCCTACCCCAGCGAAGTCACCAAGGAATTCACC
TTCGGCCCGCAGAACCAATTCGACGACGTCTTCGTTATGGACCGCGACCT
GTCCCGCGTTCCCCTCGATACGCGGGGTGAGCCCCTCCGCCTGCTGGCCG
AGTTCCAGCACCCAGACACGCGTCTGCACCTGCAAGTGCACAGCACGGAG
CCGGCCTTCCAATTCTACACGGGCCAAGGCATCGACGTACCCGAGACAGA
CGGGAAACCGAGTCGGGGCCCATTTGCGGGGTTCTGCATCGAACCCAGTC
GGTTTGTCAATGCGGTCAATGAGCCCGGATGGCGGCACACGGTCATTCTC
CCGAAGGGGAAGAAGTACGGTAGTACAATTGTGTATAAGGCCTGGAGGGA
GTAG
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Coding sequence (CDS) from alignment at An11:2604825..2605878+

>CBS51388_007367-T1 ID=CBS51388_007367-T1|Name=CBS51388_007367-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1986bp|location=Sequence derived from alignment at An11:2604825..2605878+ (Aspergillus niger CBS 513.88)
ATGGGCGACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCA
GGAATTCAACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAG
AAGCCTACGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGC
GTCGCTAACCGCACCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCA
ATATCAACTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTC
GTGGATGGGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGAT
GGAAAGACCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGG
ATACCCAGGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGG
TGGAGAATGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAG
TTGGTGGGCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAG
CTACTTCAACCTCAACGGTGGCCCAACCACCGAAGGCACCATCACCAAAC
TATCAACACAGGACTACCTACCCCTAGAGAACGGCATCCCATTGGGCCCC
ATTGAGCCCTACCCCAGCGAAGTCACCAAGGAATTCACCTTCGGCCCGCA
GAACCAATTCGACGACGTCTTCGTTATGGACCGCGACCTGTCCCGCGTTC
CCCTCGATACGCGGGGTGAGCCCCTCCGCCTGCTGGCCGAGTTCCAGCAC
CCAGACACGCGTCTGCACCTGCAAGTGCACAGCACGGAGCCGGCCTTCCA
ATTCTACACGGGCCAAGGCATCGACGTACCCGAGACAGACGGGAAACCGA
GTCGGGGCCCATTTGCGGGGTTCTGCATCGAACCCAGTCGGTTTGTCAAT
GCGGTCAATGAGCCCGGATGGCGGCACACGGTCATTCTCCCGAAGGGGAA
GAAGTACGGTAGTACAATTGTGTATAAGGCCTGGAGGGAGTAGATGGGCG
ACAAAACCTCTGCCAAGTTCCTCTCCCTCGGCGCCATCATCCAGGAATTC
AACGTGGACGGACAAAACATCGTTCAGGGATTCACCACGAAAGAAGCCTA
CGAGAAGCACAACTCGCCCTGGTTCGGCGCGAACATTGGACGCGTCGCTA
ACCGCACCAAGGACGGTGTTATTCAATCTCTCAATGGACAGCAATATCAA
CTCGAACTGAACGATCCTCCGAATGCGCTGCACGGAGGTAGTCGTGGATG
GGGTCGCTGCGAATTCGACGGTCCGACGGTGTTGAACCGCGATGGAAAGA
CCACGCTGCTGTATACGTACCTGAGTCGTGATGGGGAGGCAGGATACCCA
GGTACAGTAGAATTGAGGGTCTACTATACCACGAGTGAGGAGGTGGAGAA
TGGCAAGACTACATCCGTGCTGAAGATTGAATACGAGGCTGAGTTGGTGG
GCGACGAGTGCAAAGAGACAGTTGTTAATTTGACCAACCACAGCTACTTC
AACCTCAACGGTGGCCCAACCACCGAAGGCACCATCACCAAACTATCAAC
ACAGGACTACCTACCCCTAGAGAACGGCATCCCATTGGGCCCCATTGAGC
CCTACCCCAGCGAAGTCACCAAGGAATTCACCTTCGGCCCGCAGAACCAA
TTCGACGACGTCTTCGTTATGGACCGCGACCTGTCCCGCGTTCCCCTCGA
TACGCGGGGTGAGCCCCTCCGCCTGCTGGCCGAGTTCCAGCACCCAGACA
CGCGTCTGCACCTGCAAGTGCACAGCACGGAGCCGGCCTTCCAATTCTAC
ACGGGCCAAGGCATCGACGTACCCGAGACAGACGGGAAACCGAGTCGGGG
CCCATTTGCGGGGTTCTGCATCGAACCCAGTCGGTTTGTCAATGCGGTCA
ATGAGCCCGGATGGCGGCACACGGTCATTCTCCCGAAGGGGAAGAAGTAC
GGTAGTACAATTGTGTATAAGGCCTGGAGGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016853isomerase activity
GO:0030246carbohydrate binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007367CBS51388_007367Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007367-T1.exon1CBS51388_007367-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007367-T1.exon2CBS51388_007367-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007367-T1.cdsCBS51388_007367-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007367-T1CBS51388_007367-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011013
DBxrefInterPro:IPR018052
DBxrefInterPro:IPR008183
DBxrefInterPro:IPR014718
DBxrefPFAM:PF01263
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2604825..2605878 +
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