You are here

Home

CBS51388_007381-T1, CBS51388_007381-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007381-T1
Unique NameCBS51388_007381-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2659334..2661282+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007381-T1 ID=CBS51388_007381-T1|Name=CBS51388_007381-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1949bp|location=Sequence derived from alignment at An11:2659334..2661282+ (Aspergillus niger CBS 513.88)
ATGAAAAGCCGCGCTCCTCTCCCGGTCCCCTCCGGCCCACAGGCTCTCCA
GAACGGCCATTCCCGCAACGTCTCGGGCTTCGACATGGCTGCCCGCAGTC
CTCCTAACCAGAGCAGTATGTTCTTTCCTATCTTTCTCGTTCTCTGCGCA
CCGCCCTCCCCCCCAAACACCGCCGCTTCGCACTGGCAAGCGAGCCTGGT
CGATTCCTCTGCACCCCAGACGGTCTCTCCCACGCTCGTCCCATGGCTCC
TCACTCCTTTAACCATGAGAGCTGGATGCTGACTTGAAGGCAACTGTCGC
GCAGACACCAAGCATGTGCCTTGCAAATTCTTCCGTCAAGGAGCTTGCCA
GGCCGGGCCTGCATGCCCCTTCCTCCATTCTACCGATGCTGCGATCGATT
ATGCGCCCTGCAAATACTTCACAAAGGTAGGGAGTTGGTGATATCGTGAA
CCGTTTCGTTCCATGCGCCGAGCATGCTCGATCGATCTTGATGGGACTAC
ATGGAGCTGACCACATTCTGGGGACAATTATAGGGAAATTGCAAATTTGG
AGCGAAGTGTGCACTGGCGCATATTCTACCCGATGGCCGCCGAGTCAATC
GTCCCAGTCCAGGAATGGCAATGGGAGGAAGCCATCTGAATCTGGGCGGG
CGTGTCAACCCGCAGGCCTACGTCAACCAGGACTCCGCGCTGACGAACTC
GGTTCTTTCCCAACAACGGATGAATGGCCATGATCCCCGGTATGGCTCTC
AGATGCCACCCCAAGATGAATACGCTGCCCTGCATGCGCAACAGCAGCAG
CAGCAGCCCCAGCCCACGCAGCAACCCCCTTACGATGCCATCCCCACCAT
TGATACTGGCTTGGTCTCGGATACTGGCTCGAAGTACGGCTCACCGGTTG
ACGATCTGCGCTTCCCCATGTCGCCGAGCCATCGTCATTTAACTGCACTT
GATGCTCCACTTCCTGCATCATTCGATAGCCAAGGGATCTCGCACGCCGC
TCGTTATGGCCCGGTTGCGGCCTCCGTACCCTCCAAATTCGGACTGGAGT
TGTCTCCGCCAGCGCAGCGGATGGGCGCTGCGCCGTCAGATGCGCTCCGC
AATCTCCGGGATGCAGCTTACGGCCCTGACATGAGAAAACCATCTTCCTC
TTTCATCGGTTCATCACCGCCTGGTCTTCTAGACGATAGCATTGGACCAC
GGTTCCTACACTCCCAGCGGCCCATAAAATCACGAGTGCTCTCTGCTAGC
GTTCCTCGGCCTACTGCGCTGGATGATTGGGATGAGAGCAATTTCCCAAT
GGAGGAAGATTACCTGCCGACGAATCTGCATGACGACGTTCTGACACCAC
AAGAGCGACTCCGGCGTTTGTCGCGCACCGATCATGAGCTCAGTTCGAGC
CATCGCGACCTTAGTGGACTGGGCATGAGTGGGACGAGTTTCTCGAAAGT
TGGATCGCCCCTCGCCTCCAGCCCATCTCGATTCGGCGCTCTGTTTGCCA
AGCAGCGGCAGAGGAAAGAGGAAGATGCCCACGGCACCTCCCTCACTCAC
ATCGGATCGCCCCTTCGCGAATCTTCTCTCAACTTGGGAACTAGCCCCAG
CTTAGGCCCAATTGGTAGCCGGCAGATCTCCGGCGATGTCTCGCCCTTTA
TCTCGAGTCCCTCTCGTCAGTCATCGATGTCTATGATTTCGCAGCAGCTA
AGCAGCGTCTCTCTGCACCCTGGCTCGGCTCGTCATTCGTCATCTGTGGG
TGCCAGCAGCCGCCTTGACCGGACAGTTTCGTCGCCAGTCAGCACTAGCA
AGATTGACGAGGAACAGGGCGACTTGGTCTTCTCCATGGAAGAAGAGGAG
AACAATAAGCGAAACAGCACTTCTTGGAGTCCGCACAAGGCTGATTCTAA
CGACGACGACGCGTCAACACCAACGAGCAATTCTGGATTCCAGCCATAA
back to top

Coding sequence (CDS) from alignment at An11:2659334..2661282+

>CBS51388_007381-T1 ID=CBS51388_007381-T1|Name=CBS51388_007381-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4959bp|location=Sequence derived from alignment at An11:2659334..2661282+ (Aspergillus niger CBS 513.88)
ATGAAAAGCCGCGCTCCTCTCCCGGTCCCCTCCGGCCCACAGGCTCTCCA
GAACGGCCATTCCCGCAACGTCTCGGGCTTCGACATGGCTGCCCGCAGTC
CTCCTAACCAGAGCAACACCAAGCATGTGCCTTGCAAATTCTTCCGTCAA
GGAGCTTGCCAGGCCGGGCCTGCATGCCCCTTCCTCCATTCTACCGATGC
TGCGATCGATTATGCGCCCTGCAAATACTTCACAAAGGGAAATTGCAAAT
TTGGAGCGAAGTGTGCACTGGCGCATATTCTACCCGATGGCCGCCGAGTC
AATCGTCCCAGTCCAGGAATGGCAATGGGAGGAAGCCATCTGAATCTGGG
CGGGCGTGTCAACCCGCAGGCCTACGTCAACCAGGACTCCGCGCTGACGA
ACTCGGTTCTTTCCCAACAACGGATGAATGGCCATGATCCCCGGTATGGC
TCTCAGATGCCACCCCAAGATGAATACGCTGCCCTGCATGCGCAACAGCA
GCAGCAGCAGCCCCAGCCCACGCAGCAACCCCCTTACGATGCCATCCCCA
CCATTGATACTGGCTTGGTCTCGGATACTGGCTCGAAGTACGGCTCACCG
GTTGACGATCTGCGCTTCCCCATGTCGCCGAGCCATCGTCATTTAACTGC
ACTTGATGCTCCACTTCCTGCATCATTCGATAGCCAAGGGATCTCGCACG
CCGCTCGTTATGGCCCGGTTGCGGCCTCCGTACCCTCCAAATTCGGACTG
GAGTTGTCTCCGCCAGCGCAGCGGATGGGCGCTGCGCCGTCAGATGCGCT
CCGCAATCTCCGGGATGCAGCTTACGGCCCTGACATGAGAAAACCATCTT
CCTCTTTCATCGGTTCATCACCGCCTGGTCTTCTAGACGATAGCATTGGA
CCACGGTTCCTACACTCCCAGCGGCCCATAAAATCACGAGTGCTCTCTGC
TAGCGTTCCTCGGCCTACTGCGCTGGATGATTGGGATGAGAGCAATTTCC
CAATGGAGGAAGATTACCTGCCGACGAATCTGCATGACGACGTTCTGACA
CCACAAGAGCGACTCCGGCGTTTGTCGCGCACCGATCATGAGCTCAGTTC
GAGCCATCGCGACCTTAGTGGACTGGGCATGAGTGGGACGAGTTTCTCGA
AAGTTGGATCGCCCCTCGCCTCCAGCCCATCTCGATTCGGCGCTCTGTTT
GCCAAGCAGCGGCAGAGGAAAGAGGAAGATGCCCACGGCACCTCCCTCAC
TCACATCGGATCGCCCCTTCGCGAATCTTCTCTCAACTTGGGAACTAGCC
CCAGCTTAGGCCCAATTGGTAGCCGGCAGATCTCCGGCGATGTCTCGCCC
TTTATCTCGAGTCCCTCTCGTCAGTCATCGATGTCTATGATTTCGCAGCA
GCTAAGCAGCGTCTCTCTGCACCCTGGCTCGGCTCGTCATTCGTCATCTG
TGGGTGCCAGCAGCCGCCTTGACCGGACAGTTTCGTCGCCAGTCAGCACT
AGCAAGATTGACGAGGAACAGGGCGACTTGGTCTTCTCCATGGAAGAAGA
GGAGAACAATAAGCGAAACAGCACTTCTTGGAGTCCGCACAAGGCTGATT
CTAACGACGACGACGCGTCAACACCAACGAGCAATTCTGGATTCCAGCCA
TAAATGAAAAGCCGCGCTCCTCTCCCGGTCCCCTCCGGCCCACAGGCTCT
CCAGAACGGCCATTCCCGCAACGTCTCGGGCTTCGACATGGCTGCCCGCA
GTCCTCCTAACCAGAGCAACACCAAGCATGTGCCTTGCAAATTCTTCCGT
CAAGGAGCTTGCCAGGCCGGGCCTGCATGCCCCTTCCTCCATTCTACCGA
TGCTGCGATCGATTATGCGCCCTGCAAATACTTCACAAAGGGAAATTGCA
AATTTGGAGCGAAGTGTGCACTGGCGCATATTCTACCCGATGGCCGCCGA
GTCAATCGTCCCAGTCCAGGAATGGCAATGGGAGGAAGCCATCTGAATCT
GGGCGGGCGTGTCAACCCGCAGGCCTACGTCAACCAGGACTCCGCGCTGA
CGAACTCGGTTCTTTCCCAACAACGGATGAATGGCCATGATCCCCGGTAT
GGCTCTCAGATGCCACCCCAAGATGAATACGCTGCCCTGCATGCGCAACA
GCAGCAGCAGCAGCCCCAGCCCACGCAGCAACCCCCTTACGATGCCATCC
CCACCATTGATACTGGCTTGGTCTCGGATACTGGCTCGAAGTACGGCTCA
CCGGTTGACGATCTGCGCTTCCCCATGTCGCCGAGCCATCGTCATTTAAC
TGCACTTGATGCTCCACTTCCTGCATCATTCGATAGCCAAGGGATCTCGC
ACGCCGCTCGTTATGGCCCGGTTGCGGCCTCCGTACCCTCCAAATTCGGA
CTGGAGTTGTCTCCGCCAGCGCAGCGGATGGGCGCTGCGCCGTCAGATGC
GCTCCGCAATCTCCGGGATGCAGCTTACGGCCCTGACATGAGAAAACCAT
CTTCCTCTTTCATCGGTTCATCACCGCCTGGTCTTCTAGACGATAGCATT
GGACCACGGTTCCTACACTCCCAGCGGCCCATAAAATCACGAGTGCTCTC
TGCTAGCGTTCCTCGGCCTACTGCGCTGGATGATTGGGATGAGAGCAATT
TCCCAATGGAGGAAGATTACCTGCCGACGAATCTGCATGACGACGTTCTG
ACACCACAAGAGCGACTCCGGCGTTTGTCGCGCACCGATCATGAGCTCAG
TTCGAGCCATCGCGACCTTAGTGGACTGGGCATGAGTGGGACGAGTTTCT
CGAAAGTTGGATCGCCCCTCGCCTCCAGCCCATCTCGATTCGGCGCTCTG
TTTGCCAAGCAGCGGCAGAGGAAAGAGGAAGATGCCCACGGCACCTCCCT
CACTCACATCGGATCGCCCCTTCGCGAATCTTCTCTCAACTTGGGAACTA
GCCCCAGCTTAGGCCCAATTGGTAGCCGGCAGATCTCCGGCGATGTCTCG
CCCTTTATCTCGAGTCCCTCTCGTCAGTCATCGATGTCTATGATTTCGCA
GCAGCTAAGCAGCGTCTCTCTGCACCCTGGCTCGGCTCGTCATTCGTCAT
CTGTGGGTGCCAGCAGCCGCCTTGACCGGACAGTTTCGTCGCCAGTCAGC
ACTAGCAAGATTGACGAGGAACAGGGCGACTTGGTCTTCTCCATGGAAGA
AGAGGAGAACAATAAGCGAAACAGCACTTCTTGGAGTCCGCACAAGGCTG
ATTCTAACGACGACGACGCGTCAACACCAACGAGCAATTCTGGATTCCAG
CCATAAATGAAAAGCCGCGCTCCTCTCCCGGTCCCCTCCGGCCCACAGGC
TCTCCAGAACGGCCATTCCCGCAACGTCTCGGGCTTCGACATGGCTGCCC
GCAGTCCTCCTAACCAGAGCAACACCAAGCATGTGCCTTGCAAATTCTTC
CGTCAAGGAGCTTGCCAGGCCGGGCCTGCATGCCCCTTCCTCCATTCTAC
CGATGCTGCGATCGATTATGCGCCCTGCAAATACTTCACAAAGGGAAATT
GCAAATTTGGAGCGAAGTGTGCACTGGCGCATATTCTACCCGATGGCCGC
CGAGTCAATCGTCCCAGTCCAGGAATGGCAATGGGAGGAAGCCATCTGAA
TCTGGGCGGGCGTGTCAACCCGCAGGCCTACGTCAACCAGGACTCCGCGC
TGACGAACTCGGTTCTTTCCCAACAACGGATGAATGGCCATGATCCCCGG
TATGGCTCTCAGATGCCACCCCAAGATGAATACGCTGCCCTGCATGCGCA
ACAGCAGCAGCAGCAGCCCCAGCCCACGCAGCAACCCCCTTACGATGCCA
TCCCCACCATTGATACTGGCTTGGTCTCGGATACTGGCTCGAAGTACGGC
TCACCGGTTGACGATCTGCGCTTCCCCATGTCGCCGAGCCATCGTCATTT
AACTGCACTTGATGCTCCACTTCCTGCATCATTCGATAGCCAAGGGATCT
CGCACGCCGCTCGTTATGGCCCGGTTGCGGCCTCCGTACCCTCCAAATTC
GGACTGGAGTTGTCTCCGCCAGCGCAGCGGATGGGCGCTGCGCCGTCAGA
TGCGCTCCGCAATCTCCGGGATGCAGCTTACGGCCCTGACATGAGAAAAC
CATCTTCCTCTTTCATCGGTTCATCACCGCCTGGTCTTCTAGACGATAGC
ATTGGACCACGGTTCCTACACTCCCAGCGGCCCATAAAATCACGAGTGCT
CTCTGCTAGCGTTCCTCGGCCTACTGCGCTGGATGATTGGGATGAGAGCA
ATTTCCCAATGGAGGAAGATTACCTGCCGACGAATCTGCATGACGACGTT
CTGACACCACAAGAGCGACTCCGGCGTTTGTCGCGCACCGATCATGAGCT
CAGTTCGAGCCATCGCGACCTTAGTGGACTGGGCATGAGTGGGACGAGTT
TCTCGAAAGTTGGATCGCCCCTCGCCTCCAGCCCATCTCGATTCGGCGCT
CTGTTTGCCAAGCAGCGGCAGAGGAAAGAGGAAGATGCCCACGGCACCTC
CCTCACTCACATCGGATCGCCCCTTCGCGAATCTTCTCTCAACTTGGGAA
CTAGCCCCAGCTTAGGCCCAATTGGTAGCCGGCAGATCTCCGGCGATGTC
TCGCCCTTTATCTCGAGTCCCTCTCGTCAGTCATCGATGTCTATGATTTC
GCAGCAGCTAAGCAGCGTCTCTCTGCACCCTGGCTCGGCTCGTCATTCGT
CATCTGTGGGTGCCAGCAGCCGCCTTGACCGGACAGTTTCGTCGCCAGTC
AGCACTAGCAAGATTGACGAGGAACAGGGCGACTTGGTCTTCTCCATGGA
AGAAGAGGAGAACAATAAGCGAAACAGCACTTCTTGGAGTCCGCACAAGG
CTGATTCTAACGACGACGACGCGTCAACACCAACGAGCAATTCTGGATTC
CAGCCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007381CBS51388_007381Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007381-T1.exon1CBS51388_007381-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007381-T1.exon2CBS51388_007381-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007381-T1.exon3CBS51388_007381-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007381-T1.cdsCBS51388_007381-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007381-T1CBS51388_007381-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR041367
DBxrefInterPro:IPR000571
DBxrefPFAM:PF18044
DBxrefPFAM:PF14608
DBxrefPFAM:PF00642
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2659334..2661282 +
Powered by Drupal