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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2701491..2703183+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007394-T1 ID=CBS51388_007394-T1|Name=CBS51388_007394-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1693bp|location=Sequence derived from alignment at An11:2701491..2703183+ (Aspergillus niger CBS 513.88)
ATGACCGACGCCTTAGCCTCTCAGCTGAATAACACTACTTTAGGGTACAT
TCACTGTCGCACGCTGGTTGATCCATATGATGAGGCTAACTTGAACACTT
CGAAGGGATGCGAGCTCAGACGCGAAGTGGAAGGAGCAATTGAATGTCCC
TGCCAAAGATGCAAGACCACAAACTGAGGTTCGTCTGACTTATGAACAAA
TGGTATAAATGTCGATAGCGATCTAATGCGGCTTAGGATGTGACTGCTAC
GAAAGGCTTGGAATTCGAAGACTTCTATATCAAACGCGAACTGATGATGG
GTATATTCGAAGCTGGGTTCGAAAAGCCTTCTCCAATTCAGGAAGAGACG
ATACCAGTTGCTCTTACAGGCAGGGATATCTTGGCGCGAGCCAAGAATGG
CACAGGAAAAACAGCAGCTTTCGTTATCCCTACCTTGGAGCGCATCAATC
CTAAAAGCACCAAGACACAAGCCCTTATCCTTGTTCCTACGAGAGAGCTG
GCGCTCCAAACGTCACATGTCTGCAAAACCTTGGGAAAGCATCTTGGTAT
CAATGTCATGGTCACCACAGGAGGTACTGGCTTGATGGATGACATCATTC
GGCTGAACGACGCAGTCCATATTCTCGTTGGGACCCCAGGAAGAGTCCTG
GACCTGGCCAGCAAAGGGGTTGCTGACCTTTCCGAGTGTCCTACCTTTGT
TATGGACGAGGCTGATAAATTGCTGTCACCTGAATTCACGCCAGTCATCG
AGCAACTACTATCATTCCATCCTAAAGACCGCCAGGTTATGCTTTTCAGC
GCCACCTTTCCACTTATTGTGAAGTCATTCAAGGTATGCTTCGTACACAA
AGATATCGCATTTCTCCTCGTGGGTGCTGATATTTTTAGGACAAACACAT
GCGCAATCCTTACGAGATCAATCTCATGGATGAGCTCACTCTCCGCGGTA
TTACGCAGTATTATGCTTTTGTTGAGGAAAAGCAGAAGGTCCACTGCTTG
AACACACTCTTCTCCAAGTTACAAATCAATCAATCTATAATCTTCTGCAA
TTCTACTAACCGAGTCGAGTTGCTCGCGAAGAAGATAACGGAATTGGGTT
ATTCTTGCTTCTATTCCCATGCCAGAATGCTTCAGCAGCATCGCAACCGG
GTGTTCCACGATTTCAGGAATGGCGTTTGCCGGAACCTTGTTTGCTCGGA
TTTGTTAACTCGAGGTATTGATATTCAAGCCGTCAATGTTGTCATAAATT
TTGATTTTCCGAAGAACGCCGAGACTTATCTGCACCGAATTGGTCGCTCT
GGTCGCTTTGGACATCTTGGTCTTGCTATCAACCTTATCAATTGGGAAGA
CCGGTTCAATTTATATAAGATTGAGCAGGAACTTGGAACTGAGATCCAGC
CGATTCCGCAAAACATCGACAAGAAGCTTTATGTCTACGACTCACCGGAC
ACAATTCCACGCCCTATTGCCAACCCATCCCAGCCTCAGATTACTGCTCA
AGCCGCGAATGCAAACATTGGTGAGCGTCGTCACAATCACCATATGAATG
GCGGGCAGTACCAGTACGGTAGGGGCCGGGGCTCTTATCGCGGAGGTCGT
GGACAAGGCCAGCGTCGCAATATGCAGAACGAAACCAAGTTTGGCACTCA
AGGACAGTCAAGCGGCAAGTCCCACCCGACGCAAGTGTCATAG back to topCoding sequence (CDS) from alignment at An11:2701491..2703183+ >CBS51388_007394-T1 ID=CBS51388_007394-T1|Name=CBS51388_007394-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6072bp|location=Sequence derived from alignment at An11:2701491..2703183+ (Aspergillus niger CBS 513.88)
ATGACCGACGCCTTAGCCTCTCAGCTGAATAACACTACTTTAGGGGATGC
GAGCTCAGACGCGAAGTGGAAGGAGCAATTGAATGTCCCTGCCAAAGATG
CAAGACCACAAACTGAGGATGTGACTGCTACGAAAGGCTTGGAATTCGAA
GACTTCTATATCAAACGCGAACTGATGATGGGTATATTCGAAGCTGGGTT
CGAAAAGCCTTCTCCAATTCAGGAAGAGACGATACCAGTTGCTCTTACAG
GCAGGGATATCTTGGCGCGAGCCAAGAATGGCACAGGAAAAACAGCAGCT
TTCGTTATCCCTACCTTGGAGCGCATCAATCCTAAAAGCACCAAGACACA
AGCCCTTATCCTTGTTCCTACGAGAGAGCTGGCGCTCCAAACGTCACATG
TCTGCAAAACCTTGGGAAAGCATCTTGGTATCAATGTCATGGTCACCACA
GGAGGTACTGGCTTGATGGATGACATCATTCGGCTGAACGACGCAGTCCA
TATTCTCGTTGGGACCCCAGGAAGAGTCCTGGACCTGGCCAGCAAAGGGG
TTGCTGACCTTTCCGAGTGTCCTACCTTTGTTATGGACGAGGCTGATAAA
TTGCTGTCACCTGAATTCACGCCAGTCATCGAGCAACTACTATCATTCCA
TCCTAAAGACCGCCAGGTTATGCTTTTCAGCGCCACCTTTCCACTTATTG
TGAAGTCATTCAAGGACAAACACATGCGCAATCCTTACGAGATCAATCTC
ATGGATGAGCTCACTCTCCGCGGTATTACGCAGTATTATGCTTTTGTTGA
GGAAAAGCAGAAGGTCCACTGCTTGAACACACTCTTCTCCAAGTTACAAA
TCAATCAATCTATAATCTTCTGCAATTCTACTAACCGAGTCGAGTTGCTC
GCGAAGAAGATAACGGAATTGGGTTATTCTTGCTTCTATTCCCATGCCAG
AATGCTTCAGCAGCATCGCAACCGGGTGTTCCACGATTTCAGGAATGGCG
TTTGCCGGAACCTTGTTTGCTCGGATTTGTTAACTCGAGGTATTGATATT
CAAGCCGTCAATGTTGTCATAAATTTTGATTTTCCGAAGAACGCCGAGAC
TTATCTGCACCGAATTGGTCGCTCTGGTCGCTTTGGACATCTTGGTCTTG
CTATCAACCTTATCAATTGGGAAGACCGGTTCAATTTATATAAGATTGAG
CAGGAACTTGGAACTGAGATCCAGCCGATTCCGCAAAACATCGACAAGAA
GCTTTATGTCTACGACTCACCGGACACAATTCCACGCCCTATTGCCAACC
CATCCCAGCCTCAGATTACTGCTCAAGCCGCGAATGCAAACATTGGTGAG
CGTCGTCACAATCACCATATGAATGGCGGGCAGTACCAGTACGGTAGGGG
CCGGGGCTCTTATCGCGGAGGTCGTGGACAAGGCCAGCGTCGCAATATGC
AGAACGAAACCAAGTTTGGCACTCAAGGACAGTCAAGCGGCAAGTCCCAC
CCGACGCAAGTGTCATAGATGACCGACGCCTTAGCCTCTCAGCTGAATAA
CACTACTTTAGGGGATGCGAGCTCAGACGCGAAGTGGAAGGAGCAATTGA
ATGTCCCTGCCAAAGATGCAAGACCACAAACTGAGGATGTGACTGCTACG
AAAGGCTTGGAATTCGAAGACTTCTATATCAAACGCGAACTGATGATGGG
TATATTCGAAGCTGGGTTCGAAAAGCCTTCTCCAATTCAGGAAGAGACGA
TACCAGTTGCTCTTACAGGCAGGGATATCTTGGCGCGAGCCAAGAATGGC
ACAGGAAAAACAGCAGCTTTCGTTATCCCTACCTTGGAGCGCATCAATCC
TAAAAGCACCAAGACACAAGCCCTTATCCTTGTTCCTACGAGAGAGCTGG
CGCTCCAAACGTCACATGTCTGCAAAACCTTGGGAAAGCATCTTGGTATC
AATGTCATGGTCACCACAGGAGGTACTGGCTTGATGGATGACATCATTCG
GCTGAACGACGCAGTCCATATTCTCGTTGGGACCCCAGGAAGAGTCCTGG
ACCTGGCCAGCAAAGGGGTTGCTGACCTTTCCGAGTGTCCTACCTTTGTT
ATGGACGAGGCTGATAAATTGCTGTCACCTGAATTCACGCCAGTCATCGA
GCAACTACTATCATTCCATCCTAAAGACCGCCAGGTTATGCTTTTCAGCG
CCACCTTTCCACTTATTGTGAAGTCATTCAAGGACAAACACATGCGCAAT
CCTTACGAGATCAATCTCATGGATGAGCTCACTCTCCGCGGTATTACGCA
GTATTATGCTTTTGTTGAGGAAAAGCAGAAGGTCCACTGCTTGAACACAC
TCTTCTCCAAGTTACAAATCAATCAATCTATAATCTTCTGCAATTCTACT
AACCGAGTCGAGTTGCTCGCGAAGAAGATAACGGAATTGGGTTATTCTTG
CTTCTATTCCCATGCCAGAATGCTTCAGCAGCATCGCAACCGGGTGTTCC
ACGATTTCAGGAATGGCGTTTGCCGGAACCTTGTTTGCTCGGATTTGTTA
ACTCGAGGTATTGATATTCAAGCCGTCAATGTTGTCATAAATTTTGATTT
TCCGAAGAACGCCGAGACTTATCTGCACCGAATTGGTCGCTCTGGTCGCT
TTGGACATCTTGGTCTTGCTATCAACCTTATCAATTGGGAAGACCGGTTC
AATTTATATAAGATTGAGCAGGAACTTGGAACTGAGATCCAGCCGATTCC
GCAAAACATCGACAAGAAGCTTTATGTCTACGACTCACCGGACACAATTC
CACGCCCTATTGCCAACCCATCCCAGCCTCAGATTACTGCTCAAGCCGCG
AATGCAAACATTGGTGAGCGTCGTCACAATCACCATATGAATGGCGGGCA
GTACCAGTACGGTAGGGGCCGGGGCTCTTATCGCGGAGGTCGTGGACAAG
GCCAGCGTCGCAATATGCAGAACGAAACCAAGTTTGGCACTCAAGGACAG
TCAAGCGGCAAGTCCCACCCGACGCAAGTGTCATAGATGACCGACGCCTT
AGCCTCTCAGCTGAATAACACTACTTTAGGGGATGCGAGCTCAGACGCGA
AGTGGAAGGAGCAATTGAATGTCCCTGCCAAAGATGCAAGACCACAAACT
GAGGATGTGACTGCTACGAAAGGCTTGGAATTCGAAGACTTCTATATCAA
ACGCGAACTGATGATGGGTATATTCGAAGCTGGGTTCGAAAAGCCTTCTC
CAATTCAGGAAGAGACGATACCAGTTGCTCTTACAGGCAGGGATATCTTG
GCGCGAGCCAAGAATGGCACAGGAAAAACAGCAGCTTTCGTTATCCCTAC
CTTGGAGCGCATCAATCCTAAAAGCACCAAGACACAAGCCCTTATCCTTG
TTCCTACGAGAGAGCTGGCGCTCCAAACGTCACATGTCTGCAAAACCTTG
GGAAAGCATCTTGGTATCAATGTCATGGTCACCACAGGAGGTACTGGCTT
GATGGATGACATCATTCGGCTGAACGACGCAGTCCATATTCTCGTTGGGA
CCCCAGGAAGAGTCCTGGACCTGGCCAGCAAAGGGGTTGCTGACCTTTCC
GAGTGTCCTACCTTTGTTATGGACGAGGCTGATAAATTGCTGTCACCTGA
ATTCACGCCAGTCATCGAGCAACTACTATCATTCCATCCTAAAGACCGCC
AGGTTATGCTTTTCAGCGCCACCTTTCCACTTATTGTGAAGTCATTCAAG
GACAAACACATGCGCAATCCTTACGAGATCAATCTCATGGATGAGCTCAC
TCTCCGCGGTATTACGCAGTATTATGCTTTTGTTGAGGAAAAGCAGAAGG
TCCACTGCTTGAACACACTCTTCTCCAAGTTACAAATCAATCAATCTATA
ATCTTCTGCAATTCTACTAACCGAGTCGAGTTGCTCGCGAAGAAGATAAC
GGAATTGGGTTATTCTTGCTTCTATTCCCATGCCAGAATGCTTCAGCAGC
ATCGCAACCGGGTGTTCCACGATTTCAGGAATGGCGTTTGCCGGAACCTT
GTTTGCTCGGATTTGTTAACTCGAGGTATTGATATTCAAGCCGTCAATGT
TGTCATAAATTTTGATTTTCCGAAGAACGCCGAGACTTATCTGCACCGAA
TTGGTCGCTCTGGTCGCTTTGGACATCTTGGTCTTGCTATCAACCTTATC
AATTGGGAAGACCGGTTCAATTTATATAAGATTGAGCAGGAACTTGGAAC
TGAGATCCAGCCGATTCCGCAAAACATCGACAAGAAGCTTTATGTCTACG
ACTCACCGGACACAATTCCACGCCCTATTGCCAACCCATCCCAGCCTCAG
ATTACTGCTCAAGCCGCGAATGCAAACATTGGTGAGCGTCGTCACAATCA
CCATATGAATGGCGGGCAGTACCAGTACGGTAGGGGCCGGGGCTCTTATC
GCGGAGGTCGTGGACAAGGCCAGCGTCGCAATATGCAGAACGAAACCAAG
TTTGGCACTCAAGGACAGTCAAGCGGCAAGTCCCACCCGACGCAAGTGTC
ATAGATGACCGACGCCTTAGCCTCTCAGCTGAATAACACTACTTTAGGGG
ATGCGAGCTCAGACGCGAAGTGGAAGGAGCAATTGAATGTCCCTGCCAAA
GATGCAAGACCACAAACTGAGGATGTGACTGCTACGAAAGGCTTGGAATT
CGAAGACTTCTATATCAAACGCGAACTGATGATGGGTATATTCGAAGCTG
GGTTCGAAAAGCCTTCTCCAATTCAGGAAGAGACGATACCAGTTGCTCTT
ACAGGCAGGGATATCTTGGCGCGAGCCAAGAATGGCACAGGAAAAACAGC
AGCTTTCGTTATCCCTACCTTGGAGCGCATCAATCCTAAAAGCACCAAGA
CACAAGCCCTTATCCTTGTTCCTACGAGAGAGCTGGCGCTCCAAACGTCA
CATGTCTGCAAAACCTTGGGAAAGCATCTTGGTATCAATGTCATGGTCAC
CACAGGAGGTACTGGCTTGATGGATGACATCATTCGGCTGAACGACGCAG
TCCATATTCTCGTTGGGACCCCAGGAAGAGTCCTGGACCTGGCCAGCAAA
GGGGTTGCTGACCTTTCCGAGTGTCCTACCTTTGTTATGGACGAGGCTGA
TAAATTGCTGTCACCTGAATTCACGCCAGTCATCGAGCAACTACTATCAT
TCCATCCTAAAGACCGCCAGGTTATGCTTTTCAGCGCCACCTTTCCACTT
ATTGTGAAGTCATTCAAGGACAAACACATGCGCAATCCTTACGAGATCAA
TCTCATGGATGAGCTCACTCTCCGCGGTATTACGCAGTATTATGCTTTTG
TTGAGGAAAAGCAGAAGGTCCACTGCTTGAACACACTCTTCTCCAAGTTA
CAAATCAATCAATCTATAATCTTCTGCAATTCTACTAACCGAGTCGAGTT
GCTCGCGAAGAAGATAACGGAATTGGGTTATTCTTGCTTCTATTCCCATG
CCAGAATGCTTCAGCAGCATCGCAACCGGGTGTTCCACGATTTCAGGAAT
GGCGTTTGCCGGAACCTTGTTTGCTCGGATTTGTTAACTCGAGGTATTGA
TATTCAAGCCGTCAATGTTGTCATAAATTTTGATTTTCCGAAGAACGCCG
AGACTTATCTGCACCGAATTGGTCGCTCTGGTCGCTTTGGACATCTTGGT
CTTGCTATCAACCTTATCAATTGGGAAGACCGGTTCAATTTATATAAGAT
TGAGCAGGAACTTGGAACTGAGATCCAGCCGATTCCGCAAAACATCGACA
AGAAGCTTTATGTCTACGACTCACCGGACACAATTCCACGCCCTATTGCC
AACCCATCCCAGCCTCAGATTACTGCTCAAGCCGCGAATGCAAACATTGG
TGAGCGTCGTCACAATCACCATATGAATGGCGGGCAGTACCAGTACGGTA
GGGGCCGGGGCTCTTATCGCGGAGGTCGTGGACAAGGCCAGCGTCGCAAT
ATGCAGAACGAAACCAAGTTTGGCACTCAAGGACAGTCAAGCGGCAAGTC
CCACCCGACGCAAGTGTCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | DExD/H-box ATP-dependent RNA helicase dhh1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2701491..2703183 + |
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