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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2706507..2708063- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007396-T1 ID=CBS51388_007396-T1|Name=CBS51388_007396-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1557bp|location=Sequence derived from alignment at An11:2706507..2708063- (Aspergillus niger CBS 513.88)
ATGGAGCTGATGATCCCGTATCCGGACTTGCCATACCAACAACCTCCGCA
TGCCCCAAATCTCGAGCTAGCCGAGACTCCAGCAGCTGGATTTTTGAGAG
TCTGGACCAACGAGCATGGTTTATTCAACCCCAGCTCGATAGAATATGTT
CAACGCGCCGTGGATATGCGCTCGATGTTTCGTGCGGTCTGCTGCTAGGA
TTGGCTCCAATCCGCGTCTGTTTCTACAACATCGCGGTCTAAAGACTGGT
CTGCTATACCTCCTTCATATCTATTTCTGTTTCACCGTCTAGGAAGGAAC
TGACGTGGTCCGAGGCAGATTCCTCAGGCCTTTCACAAGCCCTATTAGCA
CGCGCTCGTTCTTTGACCAGTGAACATTCCACACTCTCCGCCCATTTGGC
TGAGGTATTTGATGCGAAACTCGCCAAGCGAGTGGGTGAACTCGCACCAA
TTGCGAGTACCTTGAAAGAGTGGGAACACGCAAATAGTGTATGTATTTCT
CCAATGTATTCCTGTATTCAGCTCTATTGACATTTTGCAGTCTATATCGG
AACTTTTGTCCCTGCTTGATGACCCAGAAACCGATGCTGAGCTGAGGTCG
CTTGCAGTTGAAGACCTGGAGAGCAGCAAGATCGCGCTGCCTGCCATAGC
GGATAATTTAAAGAAGGCTCTTATACCTCGCCACCCTTTCGCAGACCTCC
CATGCTTGCTCGAAATACGCCCCGGCGCAGGTGGGGACGAGGCTGGCCTT
TTTGCTTTCGAGGTATTGAGAATGTATATCGCCTTCTGTTCACGTCGTGG
TTTCAGGTATAGCATCATAAAACAGGATGTTGCAGACGGCCCTGCGCAAG
ACCGATTGAGTGAAGCGGTCCTGGAAGTTGACGCGGATGGGGCCTATGAC
ATCCTGAGAACAGAGTCGGGAGTTCATAGAGTACAGAGGGTTCCCGCTAC
CGAGGCCAAGGGCCGCACACATACCAGTGCCGTTAGTGTGATGATACTTC
CTAGTTTTCCAGACTCCGGGAGTGGCCTTGATAGTTCACTCAATTTTGAG
GACCCAAACAGTGACTACTATGTGGATCCTCAAGAGGTTCGCACAGAGAA
GATGCGAGCCGGTGGCGCAGGCGGTCAGCATGTCAATAAAACCGAGTCAG
CTATTCGGTTGACCCATATACCAACGGGTACCGTTGTCTCTATGCAAGAT
TCACGTTCCCAACATGCCAATCGGAAGAAGGCTTGGCAGGTTTTGCGGGC
GAGATTAGCTGAAGCAAGACGAGAAGCCCGAGAACAGGAATTGGTTAACC
TAAGGAGAGGAGCAATGGGCGGTGTTGCTCGAATGGGACGCGGTGACAAG
ATCCGAACTTACAATTACGGTCAGAATCGCTGCACAGACCATCGCAGCGG
CCTCACCATACATAACCTGGATAGTGTTCTTGATGGTGGTGAAGGCCTAG
AAACCGTAATGGATAGCGTACGGACATGGCTCGTCGAGCGCGAAATAGAG
GCCATGGCTGCTGAAGAATCAGTCCAAGACAAAGAAGGGCTGCGTGCCCA
ACTGTGA back to topCoding sequence (CDS) from alignment at An11:2706507..2708063- >CBS51388_007396-T1 ID=CBS51388_007396-T1|Name=CBS51388_007396-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4167bp|location=Sequence derived from alignment at An11:2706507..2708063- (Aspergillus niger CBS 513.88)
TCTATATCGGAACTTTTGTCCCTGCTTGATGACCCAGAAACCGATGCTGA
GCTGAGGTCGCTTGCAGTTGAAGACCTGGAGAGCAGCAAGATCGCGCTGC
CTGCCATAGCGGATAATTTAAAGAAGGCTCTTATACCTCGCCACCCTTTC
GCAGACCTCCCATGCTTGCTCGAAATACGCCCCGGCGCAGGTGGGGACGA
GGCTGGCCTTTTTGCTTTCGAGGTATTGAGAATGTATATCGCCTTCTGTT
CACGTCGTGGTTTCAGGTATAGCATCATAAAACAGGATGTTGCAGACGGC
CCTGCGCAAGACCGATTGAGTGAAGCGGTCCTGGAAGTTGACGCGGATGG
GGCCTATGACATCCTGAGAACAGAGTCGGGAGTTCATAGAGTACAGAGGG
TTCCCGCTACCGAGGCCAAGGGCCGCACACATACCAGTGCCGTTAGTGTG
ATGATACTTCCTAGTTTTCCAGACTCCGGGAGTGGCCTTGATAGTTCACT
CAATTTTGAGGACCCAAACAGTGACTACTATGTGGATCCTCAAGAGGTTC
GCACAGAGAAGATGCGAGCCGGTGGCGCAGGCGGTCAGCATGTCAATAAA
ACCGAGTCAGCTATTCGGTTGACCCATATACCAACGGGTACCGTTGTCTC
TATGCAAGATTCACGTTCCCAACATGCCAATCGGAAGAAGGCTTGGCAGG
TTTTGCGGGCGAGATTAGCTGAAGCAAGACGAGAAGCCCGAGAACAGGAA
TTGGTTAACCTAAGGAGAGGAGCAATGGGCGGTGTTGCTCGAATGGGACG
CGGTGACAAGATCCGAACTTACAATTACGGTCAGAATCGCTGCACAGACC
ATCGCAGCGGCCTCACCATACATAACCTGGATAGTGTTCTTGATGGTGGT
GAAGGCCTAGAAACCGTAATGGATAGCGTACGGACATGGCTCGTCGAGCG
CGAAATAGAGGCCATGGCTGCTGAAGAATCAGTCCAAGACAAAGAAGGGC
TGCGTGCCCAACTGTGAGAAGGAACTGACGTGGTCCGAGGCAGATTCCTC
AGGCCTTTCACAAGCCCTATTAGCACGCGCTCGTTCTTTGACCAGTGAAC
ATTCCACACTCTCCGCCCATTTGGCTGAGGTATTTGATGCGAAACTCGCC
AAGCGAGTGGGTGAACTCGCACCAATTGCGAGTACCTTGAAAGAGTGGGA
ACACGCAAATAGTATGGAGCTGATGATCCCGTATCCGGACTTGCCATACC
AACAACCTCCGCATGCCCCAAATCTCGAGCTAGCCGAGACTCCAGCAGCT
GGATTTTTGAGAGTCTGGACCAACGAGCATGGTTTATTCAACCCCAGCTC
GATAGAATATGTTCAACGCGCCGTGGATATGCGCTCGATTCTATATCGGA
ACTTTTGTCCCTGCTTGATGACCCAGAAACCGATGCTGAGCTGAGGTCGC
TTGCAGTTGAAGACCTGGAGAGCAGCAAGATCGCGCTGCCTGCCATAGCG
GATAATTTAAAGAAGGCTCTTATACCTCGCCACCCTTTCGCAGACCTCCC
ATGCTTGCTCGAAATACGCCCCGGCGCAGGTGGGGACGAGGCTGGCCTTT
TTGCTTTCGAGGTATTGAGAATGTATATCGCCTTCTGTTCACGTCGTGGT
TTCAGGTATAGCATCATAAAACAGGATGTTGCAGACGGCCCTGCGCAAGA
CCGATTGAGTGAAGCGGTCCTGGAAGTTGACGCGGATGGGGCCTATGACA
TCCTGAGAACAGAGTCGGGAGTTCATAGAGTACAGAGGGTTCCCGCTACC
GAGGCCAAGGGCCGCACACATACCAGTGCCGTTAGTGTGATGATACTTCC
TAGTTTTCCAGACTCCGGGAGTGGCCTTGATAGTTCACTCAATTTTGAGG
ACCCAAACAGTGACTACTATGTGGATCCTCAAGAGGTTCGCACAGAGAAG
ATGCGAGCCGGTGGCGCAGGCGGTCAGCATGTCAATAAAACCGAGTCAGC
TATTCGGTTGACCCATATACCAACGGGTACCGTTGTCTCTATGCAAGATT
CACGTTCCCAACATGCCAATCGGAAGAAGGCTTGGCAGGTTTTGCGGGCG
AGATTAGCTGAAGCAAGACGAGAAGCCCGAGAACAGGAATTGGTTAACCT
AAGGAGAGGAGCAATGGGCGGTGTTGCTCGAATGGGACGCGGTGACAAGA
TCCGAACTTACAATTACGGTCAGAATCGCTGCACAGACCATCGCAGCGGC
CTCACCATACATAACCTGGATAGTGTTCTTGATGGTGGTGAAGGCCTAGA
AACCGTAATGGATAGCGTACGGACATGGCTCGTCGAGCGCGAAATAGAGG
CCATGGCTGCTGAAGAATCAGTCCAAGACAAAGAAGGGCTGCGTGCCCAA
CTGTGAGAAGGAACTGACGTGGTCCGAGGCAGATTCCTCAGGCCTTTCAC
AAGCCCTATTAGCACGCGCTCGTTCTTTGACCAGTGAACATTCCACACTC
TCCGCCCATTTGGCTGAGGTATTTGATGCGAAACTCGCCAAGCGAGTGGG
TGAACTCGCACCAATTGCGAGTACCTTGAAAGAGTGGGAACACGCAAATA
GTATGGAGCTGATGATCCCGTATCCGGACTTGCCATACCAACAACCTCCG
CATGCCCCAAATCTCGAGCTAGCCGAGACTCCAGCAGCTGGATTTTTGAG
AGTCTGGACCAACGAGCATGGTTTATTCAACCCCAGCTCGATAGAATATG
TTCAACGCGCCGTGGATATGCGCTCGATTCTATATCGGAACTTTTGTCCC
TGCTTGATGACCCAGAAACCGATGCTGAGCTGAGGTCGCTTGCAGTTGAA
GACCTGGAGAGCAGCAAGATCGCGCTGCCTGCCATAGCGGATAATTTAAA
GAAGGCTCTTATACCTCGCCACCCTTTCGCAGACCTCCCATGCTTGCTCG
AAATACGCCCCGGCGCAGGTGGGGACGAGGCTGGCCTTTTTGCTTTCGAG
GTATTGAGAATGTATATCGCCTTCTGTTCACGTCGTGGTTTCAGGTATAG
CATCATAAAACAGGATGTTGCAGACGGCCCTGCGCAAGACCGATTGAGTG
AAGCGGTCCTGGAAGTTGACGCGGATGGGGCCTATGACATCCTGAGAACA
GAGTCGGGAGTTCATAGAGTACAGAGGGTTCCCGCTACCGAGGCCAAGGG
CCGCACACATACCAGTGCCGTTAGTGTGATGATACTTCCTAGTTTTCCAG
ACTCCGGGAGTGGCCTTGATAGTTCACTCAATTTTGAGGACCCAAACAGT
GACTACTATGTGGATCCTCAAGAGGTTCGCACAGAGAAGATGCGAGCCGG
TGGCGCAGGCGGTCAGCATGTCAATAAAACCGAGTCAGCTATTCGGTTGA
CCCATATACCAACGGGTACCGTTGTCTCTATGCAAGATTCACGTTCCCAA
CATGCCAATCGGAAGAAGGCTTGGCAGGTTTTGCGGGCGAGATTAGCTGA
AGCAAGACGAGAAGCCCGAGAACAGGAATTGGTTAACCTAAGGAGAGGAG
CAATGGGCGGTGTTGCTCGAATGGGACGCGGTGACAAGATCCGAACTTAC
AATTACGGTCAGAATCGCTGCACAGACCATCGCAGCGGCCTCACCATACA
TAACCTGGATAGTGTTCTTGATGGTGGTGAAGGCCTAGAAACCGTAATGG
ATAGCGTACGGACATGGCTCGTCGAGCGCGAAATAGAGGCCATGGCTGCT
GAAGAATCAGTCCAAGACAAAGAAGGGCTGCGTGCCCAACTGTGAGAAGG
AACTGACGTGGTCCGAGGCAGATTCCTCAGGCCTTTCACAAGCCCTATTA
GCACGCGCTCGTTCTTTGACCAGTGAACATTCCACACTCTCCGCCCATTT
GGCTGAGGTATTTGATGCGAAACTCGCCAAGCGAGTGGGTGAACTCGCAC
CAATTGCGAGTACCTTGAAAGAGTGGGAACACGCAAATAGTATGGAGCTG
ATGATCCCGTATCCGGACTTGCCATACCAACAACCTCCGCATGCCCCAAA
TCTCGAGCTAGCCGAGACTCCAGCAGCTGGATTTTTGAGAGTCTGGACCA
ACGAGCATGGTTTATTCAACCCCAGCTCGATAGAATATGTTCAACGCGCC
GTGGATATGCGCTCGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003747 | translation release factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006415 | translational termination |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000352 |
| DBxref | InterPro:IPR005139 |
| DBxref | PFAM:PF00472 |
| DBxref | PFAM:PF03462 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2706507..2708063 - |
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