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CBS51388_007397-T1, CBS51388_007397-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007397-T1
Unique NameCBS51388_007397-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2708393..2710027+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007397-T1 ID=CBS51388_007397-T1|Name=CBS51388_007397-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1635bp|location=Sequence derived from alignment at An11:2708393..2710027+ (Aspergillus niger CBS 513.88)
ATGCACTTGCCTCTAACATCTCTTACGGTCTTTCTGGCCTTTCTTTCCGC
TGGCCATGGCCTGCAGTCTTCTCAGATCCCCTCTGACACCCCACTATCAT
CGTTGATCGCTTCTGCAAAATCCCACCTTGCGGGTGGTTCCCCCCGCGAG
GCCTTGGTGTATTTTGATGCGGCTGTGTCCAGGGATCCCACAAATTATCT
TACACTCTTTCAGAGAGGTGCTACCCAGCTGAGCCTGGGTAAGAGCTCAC
TGGCTCTTGAAGACTTCGACCGGGTTCTTCAACTGAAGCCAGACTTCGAA
AGCGCTCTTCTACAGCGGGCACGACTGAAGGCCAGCTCTGCTGACTGGGC
AGGTGCGTTGGGTGATCTTGATAAAGCTGGTAAGAGGTCCACACCAGAGT
ATCAAGAACTCCGGGAATCGCGTGATGCTGCGTCTGCCGCGCTGGAAGCG
GAAAGTCGCGGAGCCTGGGATGTCTGTGTAAGCCAGGCGAGTATAGCTTT
GGCCAAGGCAACGATGTCTTTAAGCCTGCGGCGGGCTCGGGCACATTGTC
GCTTTGAGACGGGTGAAACAGAACAGGGAATCAGCGATCTTCTTCACGTG
CTACAGATTCACCCGAGCTCCTTGGAGCCCTATCTACAGATATCGTCGAC
ACTTTTCTATGCCTTGGGAGACACGGACCGCGGTATTTCCCAAGTCCGCA
AATGTCTACATTCTGACCCTGATTCGAAACCGTGCAATCGCCTTTACAGA
AGGGAGAGGCAGCTTGTAAAACAGTTCCAAAAATTGGAGGAAGCTGTGAA
TGCGCGAAAACACAACAACGCCATTAATATACTGGTAGGGGTCAGTGGTG
AAAGCGGTCTCCTCGATGACGTGCAGAAGGATGCTGCACAGGCAAAGGAG
GATGGTCTTATTCACCCAAAAGCCCCGAGCAGCCTTTATGCCTCACTCGT
CGAACGGACCTGCGAGGTTTTCCGGGAGGTTCGTTCACTCAACCCCTACT
AAAGATCCTCTTTTCGCGGTACATTACTAAATCTTGCATCACTTCAGGCG
CAAATGCCCAAACGGGCTAGTCCATACTGCTCGGAGGCTTTGACTTTCGA
TCCTAATTCTTTACCGGCGCTCCTCCTCGAGAGTCAGCATGCTATTGACG
AGGATCGGTTTGATGATGCTATACGGTTGCTAAACCAAGCCAAGGAACAT
CATTCCAATTCGAGGGAAGTTCAGGCCCTGTTGCAGAAGGCCCAAGTTCT
ACAGAAACGTTCCAAGCAGAAAGACTACTACAAGGTTTTGGGTGTGAGCC
GCGATGCGGACGAGAGGACTATCAAGCGTGCTTATCGGCAGCTTACGAAA
CAGCACCACCCTGATAAGGCCATTTCCCAGGGTGTTACCAAGGAGGAGGC
TGAGAAGAAGATGGCCTCAATTAATGAAGCTTACGAGGTACTTTCTGATC
CTGAATTGCGATCCCGGTACGACAACGGCGATGACCCCAATGACCCAGAG
TCACAAAGGGGCAGGCCATTTCAAGGGAGTCCGTTTGGACCAGGCGGACA
ATTTTTCTTCCAGCAGGGCGGCGGTCCGCAATTCAAGTTCTCGGGTCAGG
GCTTCAACTTTCCCGGCGGTTTCCCTTTCCGCTGA
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Coding sequence (CDS) from alignment at An11:2708393..2710027+

>CBS51388_007397-T1 ID=CBS51388_007397-T1|Name=CBS51388_007397-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3132bp|location=Sequence derived from alignment at An11:2708393..2710027+ (Aspergillus niger CBS 513.88)
ATGCACTTGCCTCTAACATCTCTTACGGTCTTTCTGGCCTTTCTTTCCGC
TGGCCATGGCCTGCAGTCTTCTCAGATCCCCTCTGACACCCCACTATCAT
CGTTGATCGCTTCTGCAAAATCCCACCTTGCGGGTGGTTCCCCCCGCGAG
GCCTTGGTGTATTTTGATGCGGCTGTGTCCAGGGATCCCACAAATTATCT
TACACTCTTTCAGAGAGGTGCTACCCAGCTGAGCCTGGGTAAGAGCTCAC
TGGCTCTTGAAGACTTCGACCGGGTTCTTCAACTGAAGCCAGACTTCGAA
AGCGCTCTTCTACAGCGGGCACGACTGAAGGCCAGCTCTGCTGACTGGGC
AGGTGCGTTGGGTGATCTTGATAAAGCTGGTAAGAGGTCCACACCAGAGT
ATCAAGAACTCCGGGAATCGCGTGATGCTGCGTCTGCCGCGCTGGAAGCG
GAAAGTCGCGGAGCCTGGGATGTCTGTGTAAGCCAGGCGAGTATAGCTTT
GGCCAAGGCAACGATGTCTTTAAGCCTGCGGCGGGCTCGGGCACATTGTC
GCTTTGAGACGGGTGAAACAGAACAGGGAATCAGCGATCTTCTTCACGTG
CTACAGATTCACCCGAGCTCCTTGGAGCCCTATCTACAGATATCGTCGAC
ACTTTTCTATGCCTTGGGAGACACGGACCGCGGTATTTCCCAAGTCCGCA
AATGTCTACATTCTGACCCTGATTCGAAACCGTGCAATCGCCTTTACAGA
AGGGAGAGGCAGCTTGTAAAACAGTTCCAAAAATTGGAGGAAGCTGTGAA
TGCGCGAAAACACAACAACGCCATTAATATACTGGTAGGGGTCAGTGGTG
AAAGCGGTCTCCTCGATGACGTGCAGAAGGATGCTGCACAGGCAAAGGAG
GATGGTCTTATTCACCCAAAAGCCCCGAGCAGCCTTTATGCCTCACTCGT
CGAACGGACCTGCGAGGTTTTCCGGGAGGCGCAAATGCCCAAACGGGCTA
GTCCATACTGCTCGGAGGCTTTGACTTTCGATCCTAATTCTTTACCGGCG
CTCCTCCTCGAGAGTCAGCATGCTATTGACGAGGATCGGTTTGATGATGC
TATACGGTTGCTAAACCAAGCCAAGGAACATCATTCCAATTCGAGGGAAG
TTCAGGCCCTGTTGCAGAAGGCCCAAGTTCTACAGAAACGTTCCAAGCAG
AAAGACTACTACAAGGTTTTGGGTGTGAGCCGCGATGCGGACGAGAGGAC
TATCAAGCGTGCTTATCGGCAGCTTACGAAACAGCACCACCCTGATAAGG
CCATTTCCCAGGGTGTTACCAAGGAGGAGGCTGAGAAGAAGATGGCCTCA
ATTAATGAAGCTTACGAGGTACTTTCTGATCCTGAATTGCGATCCCGGTA
CGACAACGGCGATGACCCCAATGACCCAGAGTCACAAAGGGGCAGGCCAT
TTCAAGGGAGTCCGTTTGGACCAGGCGGACAATTTTTCTTCCAGCAGGGC
GGCGGTCCGCAATTCAAGTTCTCGGGTCAGGGCTTCAACTTTCCCGGCGG
TTTCCCTTTCCGCTGAATGCACTTGCCTCTAACATCTCTTACGGTCTTTC
TGGCCTTTCTTTCCGCTGGCCATGGCCTGCAGTCTTCTCAGATCCCCTCT
GACACCCCACTATCATCGTTGATCGCTTCTGCAAAATCCCACCTTGCGGG
TGGTTCCCCCCGCGAGGCCTTGGTGTATTTTGATGCGGCTGTGTCCAGGG
ATCCCACAAATTATCTTACACTCTTTCAGAGAGGTGCTACCCAGCTGAGC
CTGGGTAAGAGCTCACTGGCTCTTGAAGACTTCGACCGGGTTCTTCAACT
GAAGCCAGACTTCGAAAGCGCTCTTCTACAGCGGGCACGACTGAAGGCCA
GCTCTGCTGACTGGGCAGGTGCGTTGGGTGATCTTGATAAAGCTGGTAAG
AGGTCCACACCAGAGTATCAAGAACTCCGGGAATCGCGTGATGCTGCGTC
TGCCGCGCTGGAAGCGGAAAGTCGCGGAGCCTGGGATGTCTGTGTAAGCC
AGGCGAGTATAGCTTTGGCCAAGGCAACGATGTCTTTAAGCCTGCGGCGG
GCTCGGGCACATTGTCGCTTTGAGACGGGTGAAACAGAACAGGGAATCAG
CGATCTTCTTCACGTGCTACAGATTCACCCGAGCTCCTTGGAGCCCTATC
TACAGATATCGTCGACACTTTTCTATGCCTTGGGAGACACGGACCGCGGT
ATTTCCCAAGTCCGCAAATGTCTACATTCTGACCCTGATTCGAAACCGTG
CAATCGCCTTTACAGAAGGGAGAGGCAGCTTGTAAAACAGTTCCAAAAAT
TGGAGGAAGCTGTGAATGCGCGAAAACACAACAACGCCATTAATATACTG
GTAGGGGTCAGTGGTGAAAGCGGTCTCCTCGATGACGTGCAGAAGGATGC
TGCACAGGCAAAGGAGGATGGTCTTATTCACCCAAAAGCCCCGAGCAGCC
TTTATGCCTCACTCGTCGAACGGACCTGCGAGGTTTTCCGGGAGGCGCAA
ATGCCCAAACGGGCTAGTCCATACTGCTCGGAGGCTTTGACTTTCGATCC
TAATTCTTTACCGGCGCTCCTCCTCGAGAGTCAGCATGCTATTGACGAGG
ATCGGTTTGATGATGCTATACGGTTGCTAAACCAAGCCAAGGAACATCAT
TCCAATTCGAGGGAAGTTCAGGCCCTGTTGCAGAAGGCCCAAGTTCTACA
GAAACGTTCCAAGCAGAAAGACTACTACAAGGTTTTGGGTGTGAGCCGCG
ATGCGGACGAGAGGACTATCAAGCGTGCTTATCGGCAGCTTACGAAACAG
CACCACCCTGATAAGGCCATTTCCCAGGGTGTTACCAAGGAGGAGGCTGA
GAAGAAGATGGCCTCAATTAATGAAGCTTACGAGGTACTTTCTGATCCTG
AATTGCGATCCCGGTACGACAACGGCGATGACCCCAATGACCCAGAGTCA
CAAAGGGGCAGGCCATTTCAAGGGAGTCCGTTTGGACCAGGCGGACAATT
TTTCTTCCAGCAGGGCGGCGGTCCGCAATTCAAGTTCTCGGGTCAGGGCT
TCAACTTTCCCGGCGGTTTCCCTTTCCGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007397CBS51388_007397Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007397-T1.exon1CBS51388_007397-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007397-T1.exon2CBS51388_007397-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007397-T1.cdsCBS51388_007397-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007397-T1CBS51388_007397-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR001623
DBxrefPFAM:PF00226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2708393..2710027 +
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