You are here

CBS51388_007398-T1, CBS51388_007398-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007398-T1
Unique NameCBS51388_007398-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:2710296..2711236-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007398-T1 ID=CBS51388_007398-T1|Name=CBS51388_007398-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=941bp|location=Sequence derived from alignment at An11:2710296..2711236- (Aspergillus niger CBS 513.88)
ATGGCGTGGTATTGCTCTGGCTCCACGAATAGCGAGCTTATCGCGAACCT GTTCAAGACGGGTCTGATAAAAGATGAAAGAGTGAAGAATGCCATGCTAG GCGTGAGTAGTAGCTCCTATCCCTGAACTTCACACACTGTTTAAGACATT GCGGCCAGCGTTTACCCTGGGTTAACACAATCGCCGCCCCCCCCTCTCCT TCCTCTTTCCATCCGCCCCGTTTCCTTCACTTCTAGCCACATATCCGCAC CTAGATGGACACTGCACGACCAGACAACCTCCCTGTTTCCTGGGTGAAAT GGCGTTTCTGACTAGAGTGCAAGGTCGATCGCGCCCATTATGCCCCCTCA AGGCCATACTCAGATTCACCGCAGCCCATCGGACATGGAGCTACCATCTC TGCTCCTCACATGCATGGACATGCCTGCGAATACCTCATCGATTACCTGA AGCCAGGCTCGCGTGTGCTGGACATCGGGTCTGGTTCGGGTTACCTCACC CACGTGCTTGCAAACCTCGTCGTGGATCCTTCGTCCACGAGCGAAGCCGA TGGCCAGGTTATAGGTGTAGACCACATTCCGGAGTTGGTGGAACTGGCAC AAACAAACATGCGCAAATCGAAAGATGGCAGCAACTTCCTTGACTCCGGA AGGGTGAAATTCATCACCGCCGATGGTCGTCTGGGCTGGAAAGAAGGTGC ACCGTACGACGCCATCCATGTTGGCGCGGCCGCGCATCATCTTCACCCCG TACTCATCGAGCAGCTCCGCGCACCAGGGCGAATGTTCATACCCGTTGAC GCGGAGGATGATGAGGCTAGCTTTGGGCTGGGGGGCGGACAATATATCTG GGTAGTTGATAAAAGTGGGGATGGTTCGGTCCGCAAGGAAAAAGTATTCC AGGTTAGCTACGTTCCTCTAACTGACCGCCCGGGAAGATAA
back to top

Coding sequence (CDS) from alignment at An11:2710296..2711236-

>CBS51388_007398-T1 ID=CBS51388_007398-T1|Name=CBS51388_007398-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1440bp|location=Sequence derived from alignment at An11:2710296..2711236- (Aspergillus niger CBS 513.88)
GTCGATCGCGCCCATTATGCCCCCTCAAGGCCATACTCAGATTCACCGCA
GCCCATCGGACATGGAGCTACCATCTCTGCTCCTCACATGCATGGACATG
CCTGCGAATACCTCATCGATTACCTGAAGCCAGGCTCGCGTGTGCTGGAC
ATCGGGTCTGGTTCGGGTTACCTCACCCACGTGCTTGCAAACCTCGTCGT
GGATCCTTCGTCCACGAGCGAAGCCGATGGCCAGGTTATAGGTGTAGACC
ACATTCCGGAGTTGGTGGAACTGGCACAAACAAACATGCGCAAATCGAAA
GATGGCAGCAACTTCCTTGACTCCGGAAGGGTGAAATTCATCACCGCCGA
TGGTCGTCTGGGCTGGAAAGAAGGTGCACCGTACGACGCCATCCATGTTG
GCGCGGCCGCGCATCATCTTCACCCCGTACTCATCGAGCAGCTCCGCGCA
CCAGGGCGAATGTTCATACCCGTTGACGCGGAGGATGATGAGGCTAGCTT
TGGGCTGGGGGGCGGACAATATATCTGGGTAGTTGATAAAAGTGGGGATG
GTTCGGTCCGCAAGGAAAAAGTATTCCAGGTTAGCTACGTTCCTCTAACT
GACCGCCCGGGAAGATAAATGGCGTGGTATTGCTCTGGCTCCACGAATAG
CGAGCTTATCGCGAACCTGTTCAAGACGGGTCTGATAAAAGATGAAAGAG
TGAAGAATGCCATGCTAGGCGTCGATCGCGCCCATTATGCCCCCTCAAGG
CCATACTCAGATTCACCGCAGCCCATCGGACATGGAGCTACCATCTCTGC
TCCTCACATGCATGGACATGCCTGCGAATACCTCATCGATTACCTGAAGC
CAGGCTCGCGTGTGCTGGACATCGGGTCTGGTTCGGGTTACCTCACCCAC
GTGCTTGCAAACCTCGTCGTGGATCCTTCGTCCACGAGCGAAGCCGATGG
CCAGGTTATAGGTGTAGACCACATTCCGGAGTTGGTGGAACTGGCACAAA
CAAACATGCGCAAATCGAAAGATGGCAGCAACTTCCTTGACTCCGGAAGG
GTGAAATTCATCACCGCCGATGGTCGTCTGGGCTGGAAAGAAGGTGCACC
GTACGACGCCATCCATGTTGGCGCGGCCGCGCATCATCTTCACCCCGTAC
TCATCGAGCAGCTCCGCGCACCAGGGCGAATGTTCATACCCGTTGACGCG
GAGGATGATGAGGCTAGCTTTGGGCTGGGGGGCGGACAATATATCTGGGT
AGTTGATAAAAGTGGGGATGGTTCGGTCCGCAAGGAAAAAGTATTCCAGG
TTAGCTACGTTCCTCTAACTGACCGCCCGGGAAGATAAATGGCGTGGTAT
TGCTCTGGCTCCACGAATAGCGAGCTTATCGCGAACCTGTTCAAGACGGG
TCTGATAAAAGATGAAAGAGTGAAGAATGCCATGCTAGGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004719protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007398CBS51388_007398Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007398-T1CBS51388_007398-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007398-T1.cdsCBS51388_007398-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007398-T1.exon2CBS51388_007398-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007398-T1.exon1CBS51388_007398-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR000682
DBxrefPFAM:PF01135
DBxrefPFAM:PF13649
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:2710296..2711236 -