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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2716934..2717508- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007401-T1 ID=CBS51388_007401-T1|Name=CBS51388_007401-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=575bp|location=Sequence derived from alignment at An11:2716934..2717508- (Aspergillus niger CBS 513.88)
ATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAGCAAGAACGCCCA
ATCGTATGCCACCCGTTCATCTCGAGCGTCATCTCGAGATATTCATTAAA
TATACTGACCCGGTCACAGCCGTTCGTCCAAGGCCGGTCTCGCCTTTCCC
GTTGGACGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGT
TGGTGCCGGTTAGTGATACTCGTTTTAACCCAAAAGGCAACTCTAACCTC
ATGATAATAGGTGCTCCCGTTTACCTCGCTGCCGTTCTTGAGTATCTCGC
CGCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCGCGATAACAAGAAGA
CCCGTATCATTCCCCGTCACCTTCAGCTCGCCATCCGCAACGATGAGGAA
CTGAACAAGCTCCTGGGTCATGTCACCATTGCCCAGGGTGGTGTCCTCCC
CAACATCCACCAGAGTAAGTATTGGCTCCATTTGTTAATTCAGCATGTGG
TACTGACAATACATAGACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAA
GGGTCCGGGAAGCCAGGAGCTGTAA back to topCoding sequence (CDS) from alignment at An11:2716934..2717508- >CBS51388_007401-T1 ID=CBS51388_007401-T1|Name=CBS51388_007401-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1620bp|location=Sequence derived from alignment at An11:2716934..2717508- (Aspergillus niger CBS 513.88)
ACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCCGGGAAGCCAG
GAGCTGTAAGTGCTCCCGTTTACCTCGCTGCCGTTCTTGAGTATCTCGCC
GCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCGCGATAACAAGAAGAC
CCGTATCATTCCCCGTCACCTTCAGCTCGCCATCCGCAACGATGAGGAAC
TGAACAAGCTCCTGGGTCATGTCACCATTGCCCAGGGTGGTGTCCTCCCC
AACATCCACCAGACCGTTCGTCCAAGGCCGGTCTCGCCTTTCCCGTTGGA
CGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGTTGGTGC
CGATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAGCAAGAACGCC
CAATCACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCCGGGAA
GCCAGGAGCTGTAAGTGCTCCCGTTTACCTCGCTGCCGTTCTTGAGTATC
TCGCCGCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCGCGATAACAAG
AAGACCCGTATCATTCCCCGTCACCTTCAGCTCGCCATCCGCAACGATGA
GGAACTGAACAAGCTCCTGGGTCATGTCACCATTGCCCAGGGTGGTGTCC
TCCCCAACATCCACCAGACCGTTCGTCCAAGGCCGGTCTCGCCTTTCCCG
TTGGACGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGCGTGTT
GGTGCCGATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAGCAAGA
ACGCCCAATCACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAGGGTCC
GGGAAGCCAGGAGCTGTAAGTGCTCCCGTTTACCTCGCTGCCGTTCTTGA
GTATCTCGCCGCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCGCGATA
ACAAGAAGACCCGTATCATTCCCCGTCACCTTCAGCTCGCCATCCGCAAC
GATGAGGAACTGAACAAGCTCCTGGGTCATGTCACCATTGCCCAGGGTGG
TGTCCTCCCCAACATCCACCAGACCGTTCGTCCAAGGCCGGTCTCGCCTT
TCCCGTTGGACGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGCTCAGC
GTGTTGGTGCCGATGACTGGAGGCAAATCTGGAGGCAAGGCCAGCGGCAG
CAAGAACGCCCAATCACCTTCTGCCCAAGAAGACCCCCAAGAGTGGAAAG
GGTCCGGGAAGCCAGGAGCTGTAAGTGCTCCCGTTTACCTCGCTGCCGTT
CTTGAGTATCTCGCCGCCGAAATTCTTGAATTGGCTGGCAACGCTGCTCG
CGATAACAAGAAGACCCGTATCATTCCCCGTCACCTTCAGCTCGCCATCC
GCAACGATGAGGAACTGAACAAGCTCCTGGGTCATGTCACCATTGCCCAG
GGTGGTGTCCTCCCCAACATCCACCAGACCGTTCGTCCAAGGCCGGTCTC
GCCTTTCCCGTTGGACGTGTTCATCGTCTCCTCCGCAAGGGCAACTACGC
TCAGCGTGTTGGTGCCGATGACTGGAGGCAAATCTGGAGGCAAGGCCAGC
GGCAGCAAGAACGCCCAATC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000786 | nucleosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032458 |
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR032454 |
| DBxref | InterPro:IPR007125 |
| DBxref | InterPro:IPR002119 |
| DBxref | PFAM:PF16211 |
| DBxref | PFAM:PF00125 |
| DBxref | PFAM:PF00808 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2716934..2717508 - |
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