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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:2718148..2718732+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007402-T1 ID=CBS51388_007402-T1|Name=CBS51388_007402-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=585bp|location=Sequence derived from alignment at An11:2718148..2718732+ (Aspergillus niger CBS 513.88)
ATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCCCC
GGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGACTG
CTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGGAG
ACCTACTCGTCTTACATCTACAAGGGTGAGTAATCTTAAGACTTGTATTC
CTAGTCAATAGTTGTTGACTGTGTTATAGTCTTGAAGCAGGTCCACCCTG
ATACCGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAAT
GGTATGTCGTGAATGAAGCAGGGTTATACCTTCAGCAAGCACCTAACGCG
GTCTAGATATCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCT
TACAACAAGAAGTCCACCATCTCTTCACGGGAGATCCAGACCTCGTAAGT
CCTCTGTCGATCAAGATAGTAGCAATTCGCTAACACCTCTCTAGTGTGAG
GCTCATCCTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCA
AGGCTGTCACGAAGTACTCGTCGTCTGCCAAATAA back to topCoding sequence (CDS) from alignment at An11:2718148..2718732+ >CBS51388_007402-T1 ID=CBS51388_007402-T1|Name=CBS51388_007402-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1704bp|location=Sequence derived from alignment at An11:2718148..2718732+ (Aspergillus niger CBS 513.88)
ATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCCCC
GGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGACTG
CTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGGAG
ACCTACTCGTCTTACATCTACAAGGTCTTGAAGCAGGTCCACCCTGATAC
CGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGATA
TCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACAAG
AAGTCCACCATCTCTTCACGGGAGATCCAGACCTCTGTGAGGCTCATCCT
TCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGTCA
CGAAGTACTCGTCGTCTGCCAAATAAATGCCTCCCAAAGCCGCTGAGAAG
AAGCCCAGCACCGGTGGCAAGGCCCCGGCAGGCGGCAAGGCTCCCGCTGA
GAAGAAGGAAGCCGGCAAGAAGACTGCTGCCGCTGCCTCCGGCGACAAGA
AGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACAAG
GTCTTGAAGCAGGTCCACCCTGATACCGGTATCTCGACTCGTGCTATGTC
CATCCTGAACTCCTTTGTCAATGATATCTTCGAGCGTGTCGCGACCGAGG
CCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCACGGGAG
ATCCAGACCTCTGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCACGC
GGTGTCGGAAGGCACCAAGGCTGTCACGAAGTACTCGTCGTCTGCCAAAT
AAATGCCTCCCAAAGCCGCTGAGAAGAAGCCCAGCACCGGTGGCAAGGCC
CCGGCAGGCGGCAAGGCTCCCGCTGAGAAGAAGGAAGCCGGCAAGAAGAC
TGCTGCCGCTGCCTCCGGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGG
AGACCTACTCGTCTTACATCTACAAGGTCTTGAAGCAGGTCCACCCTGAT
ACCGGTATCTCGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGA
TATCTTCGAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACA
AGAAGTCCACCATCTCTTCACGGGAGATCCAGACCTCTGTGAGGCTCATC
CTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGT
CACGAAGTACTCGTCGTCTGCCAAATAAATGCCTCCCAAAGCCGCTGAGA
AGAAGCCCAGCACCGGTGGCAAGGCCCCGGCAGGCGGCAAGGCTCCCGCT
GAGAAGAAGGAAGCCGGCAAGAAGACTGCTGCCGCTGCCTCCGGCGACAA
GAAGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACA
AGGTCTTGAAGCAGGTCCACCCTGATACCGGTATCTCGACTCGTGCTATG
TCCATCCTGAACTCCTTTGTCAATGATATCTTCGAGCGTGTCGCGACCGA
GGCCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCACGGG
AGATCCAGACCTCTGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCAC
GCGGTGTCGGAAGGCACCAAGGCTGTCACGAAGTACTCGTCGTCTGCCAA
ATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000786 | nucleosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007125 |
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR000558 |
| DBxref | PFAM:PF00125 |
| Product | histone H2B |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:2718148..2718732 + |
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