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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:3488..5433- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007404-T1 ID=CBS51388_007404-T1|Name=CBS51388_007404-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1946bp|location=Sequence derived from alignment at An12:3488..5433- (Aspergillus niger CBS 513.88)
ATGATCAGACCCGATTCTTATCTTCGTCCGCGGGGCGCCATGCGCGCTCT
TCTCCCAAGGGCTGGGTGCCACTTCAGCCGTTCGCTACGCTTAGGATCTC
AGAGGAGGGGTTTGCAATGGTCCGTTCCCCATCGCGCCGATGAGAAACCT
CAGTCCTTCAAGCATCAATTATACGAAAGTACACAACAACGCCTCAAACG
TGAGCGTGCTGAACAGGAACGATACTCACAGTTCCAGTCCCAATCCCAGG
GCAGTCGCAACGTGGCGTTGATGCTTGGTATGCCTATTGCCCGAGGCCCG
CCCCATGAACATCTCTGGATCTCTCGAGACCTTGATTGCTGATGTCATTG
TGCTAGCATTGGCCTTTTTCTCCACGGGGGCTTACTATCTGGGATCGTTG
AAACCTGCTGAGCTTCCCACCTCGTCAACAAGCTCCGTCTATGATACACA
GTCACCGCGACATAACGTTTCTCCCTCAAATCTACAGGCTGCTTGGGCGG
ACTTCGTTGACATTTTAGGGAAAGACAATGTCTCCACACAAAATGCCGAC
TTAGATATGCATGCAGGATCTGACTGGTCTTCCTACGCCCTGAAAGAGGG
GGAAAGACCGTTCCTCATCCTCTACCCATCTACTACGGAGGAGGTATCTC
GAATCATGAAGGTTTGCCATCAACGGTTGATCCCAGTAACCCCTTACTCA
GGCGGTACCAGCTTGGAGGGCCATTTTGCGCCCACGCGGGGTGGTATATG
CATTGATTTCCGTCGTATGGATCGTATTCTGGGTCTCCATAAGCAGGATC
TAGACGTCGTGGTCCAGCCTGCCGTTGGCTGGGAGGAGCTGAATGAACAT
CTTTCTCAGGATGGTCTTTTCTTTCCTCCGGATCCGGGCCCTGGTGCTAT
GATCGGTGGCATGATTGGCACGGGCTGTTCGGGAACAAATGCCTACAGGT
ATGGCACTATGCGTGATTGGGTGCTTTCTTTGACGGTAGTGCTTGCCGAC
GGGACTATTATTAAGACCAGGCAACGTCCACGGAAGTCAAGCGCTGGTTA
CGATCTTACAAGACTCTTTATTGGGAGTGAAGGCACCCTCGGTCTGGTGA
CTGAGGCTACGTTGAAGCTGACGGTCAAACCTAAGAGCCAAAATGTCGCC
GTCGCGAGTTTCTCTACGGTACAGAATGCGGCAGAGTGCGTGACACGCGT
AGTGGAAGAAGGTATCCCAGTAGCTGGGGTCGAGATCCTGGATGACGTGC
AGATGAAATGCATCAACGAAAGTCAGTCCACCAGCCGACACTGGAAGGAA
GCGCCTACCATATTTTTCAAGTTTGCGGGTACCCCTGTTGGCGTGAAGGA
GCAAATAAACATGGTGCAGAAGATTGTTTCTTCTACTGCGGGCCGGTCCT
TCGAGTTTGCCCGAGGTGAGAGCGAAATGCAAGAACTCTGGAGCGCCCGG
AAACAAGCACTATGGAGCGTTATGTCCATGAGGCGAGGTCCTGAGGACCA
TGTCTGGACGACTGATGTGGCTGTCCCTATAAGCAAATTACCCGAAATCA
TCGAGGCCACCAAACAAGACATGACTGAAAGTGGTTTGTTGGCGGGAATG
TGCGGTCATGTCGGCGACGGCAATTTTCATGGTAGGGATTTCTGCTTTCC
AATACCCCCAAGCCAATTGGATCAGTCTCTAACGCGCGGCAGCGATCATC
CTCTTCAATAAAGACGAGAAAGCAACAGCCGAGGCCGTGGTCCATCGGAT
GGTAAAGCGGGCTGTTGAACTAGAAGGTACAGTTACTGGCGAGCACGGAG
TTGGCCTCGTCAAGCGGGATTACCTGCAACATGAACTAGGGGAGTCGACA
GTGGATGCTATGCGCCGGGTAAGTAGTCATACATCCCATCTTCCACCATA
ACACATGGAATCCGTCGTACTAATGCAGGCGGTTCACGCGCCGTAG back to topCoding sequence (CDS) from alignment at An12:3488..5433- >CBS51388_007404-T1 ID=CBS51388_007404-T1|Name=CBS51388_007404-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6984bp|location=Sequence derived from alignment at An12:3488..5433- (Aspergillus niger CBS 513.88)
GCGGTTCACGCGCCGTAGCGATCATCCTCTTCAATAAAGACGAGAAAGCA
ACAGCCGAGGCCGTGGTCCATCGGATGGTAAAGCGGGCTGTTGAACTAGA
AGGTACAGTTACTGGCGAGCACGGAGTTGGCCTCGTCAAGCGGGATTACC
TGCAACATGAACTAGGGGAGTCGACAGTGGATGCTATGCGCCGGCATTGG
CCTTTTTCTCCACGGGGGCTTACTATCTGGGATCGTTGAAACCTGCTGAG
CTTCCCACCTCGTCAACAAGCTCCGTCTATGATACACAGTCACCGCGACA
TAACGTTTCTCCCTCAAATCTACAGGCTGCTTGGGCGGACTTCGTTGACA
TTTTAGGGAAAGACAATGTCTCCACACAAAATGCCGACTTAGATATGCAT
GCAGGATCTGACTGGTCTTCCTACGCCCTGAAAGAGGGGGAAAGACCGTT
CCTCATCCTCTACCCATCTACTACGGAGGAGGTATCTCGAATCATGAAGG
TTTGCCATCAACGGTTGATCCCAGTAACCCCTTACTCAGGCGGTACCAGC
TTGGAGGGCCATTTTGCGCCCACGCGGGGTGGTATATGCATTGATTTCCG
TCGTATGGATCGTATTCTGGGTCTCCATAAGCAGGATCTAGACGTCGTGG
TCCAGCCTGCCGTTGGCTGGGAGGAGCTGAATGAACATCTTTCTCAGGAT
GGTCTTTTCTTTCCTCCGGATCCGGGCCCTGGTGCTATGATCGGTGGCAT
GATTGGCACGGGCTGTTCGGGAACAAATGCCTACAGGTATGGCACTATGC
GTGATTGGGTGCTTTCTTTGACGGTAGTGCTTGCCGACGGGACTATTATT
AAGACCAGGCAACGTCCACGGAAGTCAAGCGCTGGTTACGATCTTACAAG
ACTCTTTATTGGGAGTGAAGGCACCCTCGGTCTGGTGACTGAGGCTACGT
TGAAGCTGACGGTCAAACCTAAGAGCCAAAATGTCGCCGTCGCGAGTTTC
TCTACGGTACAGAATGCGGCAGAGTGCGTGACACGCGTAGTGGAAGAAGG
TATCCCAGTAGCTGGGGTCGAGATCCTGGATGACGTGCAGATGAAATGCA
TCAACGAAAGTCAGTCCACCAGCCGACACTGGAAGGAAGCGCCTACCATA
TTTTTCAAGTTTGCGGGTACCCCTGTTGGCGTGAAGGAGCAAATAAACAT
GGTGCAGAAGATTGTTTCTTCTACTGCGGGCCGGTCCTTCGAGTTTGCCC
GAGGTGAGAGCGAAATGCAAGAACTCTGGAGCGCCCGGAAACAAGCACTA
TGGAGCGTTATGTCCATGAGGCGAGGTCCTGAGGACCATGTCTGGACGAC
TGATGTGGCTGTCCCTATAAGCAAATTACCCGAAATCATCGAGGCCACCA
AACAAGACATGACTGAAAGTGGTTTGTTGGCGGGAATGTGCGGTCATGTC
GGCGACGGCAATTTTCATGATGATCAGACCCGATTCTTATCTTCGTCCGC
GGGGCGCCATGCGCGCTCTTCTCCCAAGGGCTGGGTGCCACTTCAGCCGT
TCGCTACGCTTAGGATCTCAGAGGAGGGGTTTGCAATGGTCCGTTCCCCA
TCGCGCCGATGAGAAACCTCAGTCCTTCAAGCATCAATTATACGAAAGTA
CACAACAACGCCTCAAACGTGAGCGTGCTGAACAGGAACGATACTCACAG
TTCCAGTCCCAATCCCAGGGCAGTCGCAACGTGGCGTTGATGCTTGGCGG
TTCACGCGCCGTAGCGATCATCCTCTTCAATAAAGACGAGAAAGCAACAG
CCGAGGCCGTGGTCCATCGGATGGTAAAGCGGGCTGTTGAACTAGAAGGT
ACAGTTACTGGCGAGCACGGAGTTGGCCTCGTCAAGCGGGATTACCTGCA
ACATGAACTAGGGGAGTCGACAGTGGATGCTATGCGCCGGCATTGGCCTT
TTTCTCCACGGGGGCTTACTATCTGGGATCGTTGAAACCTGCTGAGCTTC
CCACCTCGTCAACAAGCTCCGTCTATGATACACAGTCACCGCGACATAAC
GTTTCTCCCTCAAATCTACAGGCTGCTTGGGCGGACTTCGTTGACATTTT
AGGGAAAGACAATGTCTCCACACAAAATGCCGACTTAGATATGCATGCAG
GATCTGACTGGTCTTCCTACGCCCTGAAAGAGGGGGAAAGACCGTTCCTC
ATCCTCTACCCATCTACTACGGAGGAGGTATCTCGAATCATGAAGGTTTG
CCATCAACGGTTGATCCCAGTAACCCCTTACTCAGGCGGTACCAGCTTGG
AGGGCCATTTTGCGCCCACGCGGGGTGGTATATGCATTGATTTCCGTCGT
ATGGATCGTATTCTGGGTCTCCATAAGCAGGATCTAGACGTCGTGGTCCA
GCCTGCCGTTGGCTGGGAGGAGCTGAATGAACATCTTTCTCAGGATGGTC
TTTTCTTTCCTCCGGATCCGGGCCCTGGTGCTATGATCGGTGGCATGATT
GGCACGGGCTGTTCGGGAACAAATGCCTACAGGTATGGCACTATGCGTGA
TTGGGTGCTTTCTTTGACGGTAGTGCTTGCCGACGGGACTATTATTAAGA
CCAGGCAACGTCCACGGAAGTCAAGCGCTGGTTACGATCTTACAAGACTC
TTTATTGGGAGTGAAGGCACCCTCGGTCTGGTGACTGAGGCTACGTTGAA
GCTGACGGTCAAACCTAAGAGCCAAAATGTCGCCGTCGCGAGTTTCTCTA
CGGTACAGAATGCGGCAGAGTGCGTGACACGCGTAGTGGAAGAAGGTATC
CCAGTAGCTGGGGTCGAGATCCTGGATGACGTGCAGATGAAATGCATCAA
CGAAAGTCAGTCCACCAGCCGACACTGGAAGGAAGCGCCTACCATATTTT
TCAAGTTTGCGGGTACCCCTGTTGGCGTGAAGGAGCAAATAAACATGGTG
CAGAAGATTGTTTCTTCTACTGCGGGCCGGTCCTTCGAGTTTGCCCGAGG
TGAGAGCGAAATGCAAGAACTCTGGAGCGCCCGGAAACAAGCACTATGGA
GCGTTATGTCCATGAGGCGAGGTCCTGAGGACCATGTCTGGACGACTGAT
GTGGCTGTCCCTATAAGCAAATTACCCGAAATCATCGAGGCCACCAAACA
AGACATGACTGAAAGTGGTTTGTTGGCGGGAATGTGCGGTCATGTCGGCG
ACGGCAATTTTCATGATGATCAGACCCGATTCTTATCTTCGTCCGCGGGG
CGCCATGCGCGCTCTTCTCCCAAGGGCTGGGTGCCACTTCAGCCGTTCGC
TACGCTTAGGATCTCAGAGGAGGGGTTTGCAATGGTCCGTTCCCCATCGC
GCCGATGAGAAACCTCAGTCCTTCAAGCATCAATTATACGAAAGTACACA
ACAACGCCTCAAACGTGAGCGTGCTGAACAGGAACGATACTCACAGTTCC
AGTCCCAATCCCAGGGCAGTCGCAACGTGGCGTTGATGCTTGGCGGTTCA
CGCGCCGTAGCGATCATCCTCTTCAATAAAGACGAGAAAGCAACAGCCGA
GGCCGTGGTCCATCGGATGGTAAAGCGGGCTGTTGAACTAGAAGGTACAG
TTACTGGCGAGCACGGAGTTGGCCTCGTCAAGCGGGATTACCTGCAACAT
GAACTAGGGGAGTCGACAGTGGATGCTATGCGCCGGCATTGGCCTTTTTC
TCCACGGGGGCTTACTATCTGGGATCGTTGAAACCTGCTGAGCTTCCCAC
CTCGTCAACAAGCTCCGTCTATGATACACAGTCACCGCGACATAACGTTT
CTCCCTCAAATCTACAGGCTGCTTGGGCGGACTTCGTTGACATTTTAGGG
AAAGACAATGTCTCCACACAAAATGCCGACTTAGATATGCATGCAGGATC
TGACTGGTCTTCCTACGCCCTGAAAGAGGGGGAAAGACCGTTCCTCATCC
TCTACCCATCTACTACGGAGGAGGTATCTCGAATCATGAAGGTTTGCCAT
CAACGGTTGATCCCAGTAACCCCTTACTCAGGCGGTACCAGCTTGGAGGG
CCATTTTGCGCCCACGCGGGGTGGTATATGCATTGATTTCCGTCGTATGG
ATCGTATTCTGGGTCTCCATAAGCAGGATCTAGACGTCGTGGTCCAGCCT
GCCGTTGGCTGGGAGGAGCTGAATGAACATCTTTCTCAGGATGGTCTTTT
CTTTCCTCCGGATCCGGGCCCTGGTGCTATGATCGGTGGCATGATTGGCA
CGGGCTGTTCGGGAACAAATGCCTACAGGTATGGCACTATGCGTGATTGG
GTGCTTTCTTTGACGGTAGTGCTTGCCGACGGGACTATTATTAAGACCAG
GCAACGTCCACGGAAGTCAAGCGCTGGTTACGATCTTACAAGACTCTTTA
TTGGGAGTGAAGGCACCCTCGGTCTGGTGACTGAGGCTACGTTGAAGCTG
ACGGTCAAACCTAAGAGCCAAAATGTCGCCGTCGCGAGTTTCTCTACGGT
ACAGAATGCGGCAGAGTGCGTGACACGCGTAGTGGAAGAAGGTATCCCAG
TAGCTGGGGTCGAGATCCTGGATGACGTGCAGATGAAATGCATCAACGAA
AGTCAGTCCACCAGCCGACACTGGAAGGAAGCGCCTACCATATTTTTCAA
GTTTGCGGGTACCCCTGTTGGCGTGAAGGAGCAAATAAACATGGTGCAGA
AGATTGTTTCTTCTACTGCGGGCCGGTCCTTCGAGTTTGCCCGAGGTGAG
AGCGAAATGCAAGAACTCTGGAGCGCCCGGAAACAAGCACTATGGAGCGT
TATGTCCATGAGGCGAGGTCCTGAGGACCATGTCTGGACGACTGATGTGG
CTGTCCCTATAAGCAAATTACCCGAAATCATCGAGGCCACCAAACAAGAC
ATGACTGAAAGTGGTTTGTTGGCGGGAATGTGCGGTCATGTCGGCGACGG
CAATTTTCATGATGATCAGACCCGATTCTTATCTTCGTCCGCGGGGCGCC
ATGCGCGCTCTTCTCCCAAGGGCTGGGTGCCACTTCAGCCGTTCGCTACG
CTTAGGATCTCAGAGGAGGGGTTTGCAATGGTCCGTTCCCCATCGCGCCG
ATGAGAAACCTCAGTCCTTCAAGCATCAATTATACGAAAGTACACAACAA
CGCCTCAAACGTGAGCGTGCTGAACAGGAACGATACTCACAGTTCCAGTC
CCAATCCCAGGGCAGTCGCAACGTGGCGTTGATGCTTGGCGGTTCACGCG
CCGTAGCGATCATCCTCTTCAATAAAGACGAGAAAGCAACAGCCGAGGCC
GTGGTCCATCGGATGGTAAAGCGGGCTGTTGAACTAGAAGGTACAGTTAC
TGGCGAGCACGGAGTTGGCCTCGTCAAGCGGGATTACCTGCAACATGAAC
TAGGGGAGTCGACAGTGGATGCTATGCGCCGGCATTGGCCTTTTTCTCCA
CGGGGGCTTACTATCTGGGATCGTTGAAACCTGCTGAGCTTCCCACCTCG
TCAACAAGCTCCGTCTATGATACACAGTCACCGCGACATAACGTTTCTCC
CTCAAATCTACAGGCTGCTTGGGCGGACTTCGTTGACATTTTAGGGAAAG
ACAATGTCTCCACACAAAATGCCGACTTAGATATGCATGCAGGATCTGAC
TGGTCTTCCTACGCCCTGAAAGAGGGGGAAAGACCGTTCCTCATCCTCTA
CCCATCTACTACGGAGGAGGTATCTCGAATCATGAAGGTTTGCCATCAAC
GGTTGATCCCAGTAACCCCTTACTCAGGCGGTACCAGCTTGGAGGGCCAT
TTTGCGCCCACGCGGGGTGGTATATGCATTGATTTCCGTCGTATGGATCG
TATTCTGGGTCTCCATAAGCAGGATCTAGACGTCGTGGTCCAGCCTGCCG
TTGGCTGGGAGGAGCTGAATGAACATCTTTCTCAGGATGGTCTTTTCTTT
CCTCCGGATCCGGGCCCTGGTGCTATGATCGGTGGCATGATTGGCACGGG
CTGTTCGGGAACAAATGCCTACAGGTATGGCACTATGCGTGATTGGGTGC
TTTCTTTGACGGTAGTGCTTGCCGACGGGACTATTATTAAGACCAGGCAA
CGTCCACGGAAGTCAAGCGCTGGTTACGATCTTACAAGACTCTTTATTGG
GAGTGAAGGCACCCTCGGTCTGGTGACTGAGGCTACGTTGAAGCTGACGG
TCAAACCTAAGAGCCAAAATGTCGCCGTCGCGAGTTTCTCTACGGTACAG
AATGCGGCAGAGTGCGTGACACGCGTAGTGGAAGAAGGTATCCCAGTAGC
TGGGGTCGAGATCCTGGATGACGTGCAGATGAAATGCATCAACGAAAGTC
AGTCCACCAGCCGACACTGGAAGGAAGCGCCTACCATATTTTTCAAGTTT
GCGGGTACCCCTGTTGGCGTGAAGGAGCAAATAAACATGGTGCAGAAGAT
TGTTTCTTCTACTGCGGGCCGGTCCTTCGAGTTTGCCCGAGGTGAGAGCG
AAATGCAAGAACTCTGGAGCGCCCGGAAACAAGCACTATGGAGCGTTATG
TCCATGAGGCGAGGTCCTGAGGACCATGTCTGGACGACTGATGTGGCTGT
CCCTATAAGCAAATTACCCGAAATCATCGAGGCCACCAAACAAGACATGA
CTGAAAGTGGTTTGTTGGCGGGAATGTGCGGTCATGTCGGCGACGGCAAT
TTTCATGATGATCAGACCCGATTCTTATCTTCGTCCGCGGGGCGCCATGC
GCGCTCTTCTCCCAAGGGCTGGGTGCCACTTCAGCCGTTCGCTACGCTTA
GGATCTCAGAGGAGGGGTTTGCAATGGTCCGTTCCCCATCGCGCCGATGA
GAAACCTCAGTCCTTCAAGCATCAATTATACGAAAGTACACAACAACGCC
TCAAACGTGAGCGTGCTGAACAGGAACGATACTCACAGTTCCAGTCCCAA
TCCCAGGGCAGTCGCAACGTGGCGTTGATGCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
| GO:0003824 | catalytic activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036318 |
| DBxref | InterPro:IPR016164 |
| DBxref | InterPro:IPR016166 |
| DBxref | InterPro:IPR004113 |
| DBxref | InterPro:IPR006094 |
| DBxref | PFAM:PF01565 |
| DBxref | PFAM:PF02913 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:3488..5433 - |
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