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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:6505..7766+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007405-T1 ID=CBS51388_007405-T1|Name=CBS51388_007405-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1262bp|location=Sequence derived from alignment at An12:6505..7766+ (Aspergillus niger CBS 513.88)
ATGAGCACCCAGAACACCAACGCTCAGGTACGTGCATTGAACTCTCATTA
CATAGGGTCAATGGTGGCTCGTCACTCCCACCATCAGCCCAAAGTGGCAC
AACCGAAATGATCGCTAATGACCTCAACCATTACCAGAATCTTTCCTTCG
TCCTCGAGGGAATTCACCGCGTCAAATTCGAAGACCGGCCAATCCCAGAG
ATCAACAATCCTCACGACGTACTGGTGAATGTCAGGTTCACAGGTATATG
TGGTAGTGATGTGCGTATAACCGAAGCCCACGAGACAGAATCAAAGGCCT
GCCTAGCTGACATGTCGGATATTTTCACCCTCAAGGTTCATTATTGGGAA
CATGGCTCCATTGGCCAATTCATTGTCAAGGATCCCATGGTCCTGGGACA
TGAATCTTCCGGTGTTGTCAGCAAGGTTGGCTCTGCCGTTACCAGTCTAA
AGGTAGGAGACTGCGTTGCAATGGAACCAGGAATCCCATGTCGCCGCTGC
GAACCATGCAAGGCGGGGAAATATAATCTCTGCGTGAAAATGGCTTTCGC
AGCGACACCTCCATATGATGGTACCTTGGCCAAGTATTACGTCCTGCCCG
AGGACTTTTGCTATAAGCTTCCTGAAAGCATCACCCTACAGGAGGGTGCG
ATCATGGAGCCCCTTAGTGTCGCCGTCCATATCGTTAAACAGGCTGGGAT
CAACCCGGGTCAATCAGTGGTAGTCTTTGGTGCTGGCCCCGTCGGACTTC
TCTGCTGTGCTGTGGCGAAGGCTTACGGTGCGTCCAAGGTTATCGCGGTT
GACATTCAAAAGGGTAGGCTAGACTTTGCGAAGAAGTATGCAGCAACTGC
CACGTTTGAGCCAGCTAAAGCCGCAGCGTTGGAGAACGCTCAACGGATAA
TAACCGAGAATGATCTAGGCTCGGGTGCAGATGTTGCCATTGACGCTTCA
GGAGCAGAGCCCTCGGTTCATACAGGCATTCACGTTCTGCGTGCTGGGGG
AACATATGTCCAGGGCGGTATGGGTAGAAGCGAAATCACCTTTCCAATAA
TGGCGGCTTGCACCAAAGAACTGAACGTCAAGGGCAGCTTCCGTTATGGG
AGTGGTGACTATAAGCTTGCAGTCTCCTTAGTAAGCGCTGGAAAGGTGAA
CGTGAAGGAATTGATCACGGGTGTCGTCAAGTTCGAGGACGCCGAGCGAG
CATTCGAAGAAGTTAGAGCTGGAAAGGGCATCAAAACGCTTATTGCTGGT
GTCGATTCATAG back to topCoding sequence (CDS) from alignment at An12:6505..7766+ >CBS51388_007405-T1 ID=CBS51388_007405-T1|Name=CBS51388_007405-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2304bp|location=Sequence derived from alignment at An12:6505..7766+ (Aspergillus niger CBS 513.88)
ATGAGCACCCAGAACACCAACGCTCAGAATCTTTCCTTCGTCCTCGAGGG
AATTCACCGCGTCAAATTCGAAGACCGGCCAATCCCAGAGATCAACAATC
CTCACGACGTACTGGTGAATGTCAGGTTCACAGGTATATGTGGTAGTGAT
GTGCGTATAACCGAAGCCCACGAGACAGAATCAAAGGCCTGCCTAGCTGA
CATGTCGGATATTTTCACCCTCAAGGTTCATTATTGGGAACATGGCTCCA
TTGGCCAATTCATTGTCAAGGATCCCATGGTCCTGGGACATGAATCTTCC
GGTGTTGTCAGCAAGGTTGGCTCTGCCGTTACCAGTCTAAAGGTAGGAGA
CTGCGTTGCAATGGAACCAGGAATCCCATGTCGCCGCTGCGAACCATGCA
AGGCGGGGAAATATAATCTCTGCGTGAAAATGGCTTTCGCAGCGACACCT
CCATATGATGGTACCTTGGCCAAGTATTACGTCCTGCCCGAGGACTTTTG
CTATAAGCTTCCTGAAAGCATCACCCTACAGGAGGGTGCGATCATGGAGC
CCCTTAGTGTCGCCGTCCATATCGTTAAACAGGCTGGGATCAACCCGGGT
CAATCAGTGGTAGTCTTTGGTGCTGGCCCCGTCGGACTTCTCTGCTGTGC
TGTGGCGAAGGCTTACGGTGCGTCCAAGGTTATCGCGGTTGACATTCAAA
AGGGTAGGCTAGACTTTGCGAAGAAGTATGCAGCAACTGCCACGTTTGAG
CCAGCTAAAGCCGCAGCGTTGGAGAACGCTCAACGGATAATAACCGAGAA
TGATCTAGGCTCGGGTGCAGATGTTGCCATTGACGCTTCAGGAGCAGAGC
CCTCGGTTCATACAGGCATTCACGTTCTGCGTGCTGGGGGAACATATGTC
CAGGGCGGTATGGGTAGAAGCGAAATCACCTTTCCAATAATGGCGGCTTG
CACCAAAGAACTGAACGTCAAGGGCAGCTTCCGTTATGGGAGTGGTGACT
ATAAGCTTGCAGTCTCCTTAGTAAGCGCTGGAAAGGTGAACGTGAAGGAA
TTGATCACGGGTGTCGTCAAGTTCGAGGACGCCGAGCGAGCATTCGAAGA
AGTTAGAGCTGGAAAGGGCATCAAAACGCTTATTGCTGGTGTCGATTCAT
AGATGAGCACCCAGAACACCAACGCTCAGAATCTTTCCTTCGTCCTCGAG
GGAATTCACCGCGTCAAATTCGAAGACCGGCCAATCCCAGAGATCAACAA
TCCTCACGACGTACTGGTGAATGTCAGGTTCACAGGTATATGTGGTAGTG
ATGTGCGTATAACCGAAGCCCACGAGACAGAATCAAAGGCCTGCCTAGCT
GACATGTCGGATATTTTCACCCTCAAGGTTCATTATTGGGAACATGGCTC
CATTGGCCAATTCATTGTCAAGGATCCCATGGTCCTGGGACATGAATCTT
CCGGTGTTGTCAGCAAGGTTGGCTCTGCCGTTACCAGTCTAAAGGTAGGA
GACTGCGTTGCAATGGAACCAGGAATCCCATGTCGCCGCTGCGAACCATG
CAAGGCGGGGAAATATAATCTCTGCGTGAAAATGGCTTTCGCAGCGACAC
CTCCATATGATGGTACCTTGGCCAAGTATTACGTCCTGCCCGAGGACTTT
TGCTATAAGCTTCCTGAAAGCATCACCCTACAGGAGGGTGCGATCATGGA
GCCCCTTAGTGTCGCCGTCCATATCGTTAAACAGGCTGGGATCAACCCGG
GTCAATCAGTGGTAGTCTTTGGTGCTGGCCCCGTCGGACTTCTCTGCTGT
GCTGTGGCGAAGGCTTACGGTGCGTCCAAGGTTATCGCGGTTGACATTCA
AAAGGGTAGGCTAGACTTTGCGAAGAAGTATGCAGCAACTGCCACGTTTG
AGCCAGCTAAAGCCGCAGCGTTGGAGAACGCTCAACGGATAATAACCGAG
AATGATCTAGGCTCGGGTGCAGATGTTGCCATTGACGCTTCAGGAGCAGA
GCCCTCGGTTCATACAGGCATTCACGTTCTGCGTGCTGGGGGAACATATG
TCCAGGGCGGTATGGGTAGAAGCGAAATCACCTTTCCAATAATGGCGGCT
TGCACCAAAGAACTGAACGTCAAGGGCAGCTTCCGTTATGGGAGTGGTGA
CTATAAGCTTGCAGTCTCCTTAGTAAGCGCTGGAAAGGTGAACGTGAAGG
AATTGATCACGGGTGTCGTCAAGTTCGAGGACGCCGAGCGAGCATTCGAA
GAAGTTAGAGCTGGAAAGGGCATCAAAACGCTTATTGCTGGTGTCGATTC
ATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR011032 |
| DBxref | InterPro:IPR002328 |
| DBxref | InterPro:IPR013149 |
| DBxref | InterPro:IPR013154 |
| DBxref | InterPro:IPR020843 |
| DBxref | PFAM:PF00107 |
| DBxref | PFAM:PF08240 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:6505..7766 + |
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