You are here

Home

CBS51388_007409-T1, CBS51388_007409-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007409-T1
Unique NameCBS51388_007409-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:27685..28845+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007409-T1 ID=CBS51388_007409-T1|Name=CBS51388_007409-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1161bp|location=Sequence derived from alignment at An12:27685..28845+ (Aspergillus niger CBS 513.88)
ATGCCCGCGTTTCATCGGGCTGTTGCGGCTATTTCGCGGCAGGCAGTATT
CAGAGGTGTGCAGAGTCAACATGTTGTCGCACGTTCTATCAGTGCCTCAG
CATTGAAGTCTGCCATTGCTCATCCCATTACTACTCACGGCCCGCCACCT
AAGGCCCCTTCACCTACACCTGCCAATGCAGAGCTACTACAGAAAGATGC
GTCTTCGCATCAGAAAAGCGAGAAAAGTCCGCTGCCAGGGAAATCATCTG
TGCTTAAGAAGCGTTTCTGGAAGAATGTTGATGTTAAGCGGAAGTCAGGT
ACGCACTTGTTCTCTTGCGATCAGTCTACACGGGACACTTGCGTTAACAT
GTTTTGTTTCTTAGATGGGGATTATCAGGTTTTGCTAGACACACGCCCTA
TTCGGACACCTTCCAAAGACGTATTATCCATACCGTCAACGAAGCCTTAT
CTTGCACATGCGATCGCGCTGGAATGGGATGTCATGACCACTGCCCAGCA
AGCGCTAAAGAACCACCTTATCCCATTAACTTCTCTGACCGCTCGAGCAG
CGGATATTGCTGCAGAAGATGCTCGAGGCGAAACTACTACGAGAGATCAA
ATAGTGAAGACGGCGATGCGGTATTTGGAAACAGACACCTTGTTGTGTTG
GGTGCCGGAGCAGAATGTTTACGCTGCTGATGAAGTGGATGCCGATGGGA
AGAAACCGGAAAGTCTCCGAGAGGCCCAAATCCGGGTCGCTAAAGATACA
ATTGCCTTCTTGAGCACCAAAGTATGGCCCGGCGTGGACATTCAGCCCAT
TCTTGACACCGATAGCATACTACCTGCTTCTCAGCCTCAGGCTACAAAAG
ACATCATTCTGCAGTGGATATCTGGTCTGCAGGCTTACGATCTGGCGGGA
CTGGAGAGAGGAGTGCTGGCCGCAAAGAGCTTGTTGATTGCAGTCCGTCT
GGTCGCTGAATGGAGTGAGACGTTCCGAGAGGTGCAACGACCGGGGCGAG
AGAGGTTCGGCATTGAGGAAGCAGCGGAAGCATCCAGTCTGGAAGTCAGG
TGGCAGACTGATATGTGGGGAGAGGTTGAGGATACCCATGATGTCGACAA
GGAAGATTTGAAACGCCAGCTCGGCAGCGTCATTGTATTGGTTAGTGGAG
AGACAAGGTGA
back to top

Coding sequence (CDS) from alignment at An12:27685..28845+

>CBS51388_007409-T1 ID=CBS51388_007409-T1|Name=CBS51388_007409-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2190bp|location=Sequence derived from alignment at An12:27685..28845+ (Aspergillus niger CBS 513.88)
ATGCCCGCGTTTCATCGGGCTGTTGCGGCTATTTCGCGGCAGGCAGTATT
CAGAGGTGTGCAGAGTCAACATGTTGTCGCACGTTCTATCAGTGCCTCAG
CATTGAAGTCTGCCATTGCTCATCCCATTACTACTCACGGCCCGCCACCT
AAGGCCCCTTCACCTACACCTGCCAATGCAGAGCTACTACAGAAAGATGC
GTCTTCGCATCAGAAAAGCGAGAAAAGTCCGCTGCCAGGGAAATCATCTG
TGCTTAAGAAGCGTTTCTGGAAGAATGTTGATGTTAAGCGGAAGTCAGAT
GGGGATTATCAGGTTTTGCTAGACACACGCCCTATTCGGACACCTTCCAA
AGACGTATTATCCATACCGTCAACGAAGCCTTATCTTGCACATGCGATCG
CGCTGGAATGGGATGTCATGACCACTGCCCAGCAAGCGCTAAAGAACCAC
CTTATCCCATTAACTTCTCTGACCGCTCGAGCAGCGGATATTGCTGCAGA
AGATGCTCGAGGCGAAACTACTACGAGAGATCAAATAGTGAAGACGGCGA
TGCGGTATTTGGAAACAGACACCTTGTTGTGTTGGGTGCCGGAGCAGAAT
GTTTACGCTGCTGATGAAGTGGATGCCGATGGGAAGAAACCGGAAAGTCT
CCGAGAGGCCCAAATCCGGGTCGCTAAAGATACAATTGCCTTCTTGAGCA
CCAAAGTATGGCCCGGCGTGGACATTCAGCCCATTCTTGACACCGATAGC
ATACTACCTGCTTCTCAGCCTCAGGCTACAAAAGACATCATTCTGCAGTG
GATATCTGGTCTGCAGGCTTACGATCTGGCGGGACTGGAGAGAGGAGTGC
TGGCCGCAAAGAGCTTGTTGATTGCAGTCCGTCTGGTCGCTGAATGGAGT
GAGACGTTCCGAGAGGTGCAACGACCGGGGCGAGAGAGGTTCGGCATTGA
GGAAGCAGCGGAAGCATCCAGTCTGGAAGTCAGGTGGCAGACTGATATGT
GGGGAGAGGTTGAGGATACCCATGATGTCGACAAGGAAGATTTGAAACGC
CAGCTCGGCAGCGTCATTGTATTGGTTAGTGGAGAGACAAGGTGAATGCC
CGCGTTTCATCGGGCTGTTGCGGCTATTTCGCGGCAGGCAGTATTCAGAG
GTGTGCAGAGTCAACATGTTGTCGCACGTTCTATCAGTGCCTCAGCATTG
AAGTCTGCCATTGCTCATCCCATTACTACTCACGGCCCGCCACCTAAGGC
CCCTTCACCTACACCTGCCAATGCAGAGCTACTACAGAAAGATGCGTCTT
CGCATCAGAAAAGCGAGAAAAGTCCGCTGCCAGGGAAATCATCTGTGCTT
AAGAAGCGTTTCTGGAAGAATGTTGATGTTAAGCGGAAGTCAGATGGGGA
TTATCAGGTTTTGCTAGACACACGCCCTATTCGGACACCTTCCAAAGACG
TATTATCCATACCGTCAACGAAGCCTTATCTTGCACATGCGATCGCGCTG
GAATGGGATGTCATGACCACTGCCCAGCAAGCGCTAAAGAACCACCTTAT
CCCATTAACTTCTCTGACCGCTCGAGCAGCGGATATTGCTGCAGAAGATG
CTCGAGGCGAAACTACTACGAGAGATCAAATAGTGAAGACGGCGATGCGG
TATTTGGAAACAGACACCTTGTTGTGTTGGGTGCCGGAGCAGAATGTTTA
CGCTGCTGATGAAGTGGATGCCGATGGGAAGAAACCGGAAAGTCTCCGAG
AGGCCCAAATCCGGGTCGCTAAAGATACAATTGCCTTCTTGAGCACCAAA
GTATGGCCCGGCGTGGACATTCAGCCCATTCTTGACACCGATAGCATACT
ACCTGCTTCTCAGCCTCAGGCTACAAAAGACATCATTCTGCAGTGGATAT
CTGGTCTGCAGGCTTACGATCTGGCGGGACTGGAGAGAGGAGTGCTGGCC
GCAAAGAGCTTGTTGATTGCAGTCCGTCTGGTCGCTGAATGGAGTGAGAC
GTTCCGAGAGGTGCAACGACCGGGGCGAGAGAGGTTCGGCATTGAGGAAG
CAGCGGAAGCATCCAGTCTGGAAGTCAGGTGGCAGACTGATATGTGGGGA
GAGGTTGAGGATACCCATGATGTCGACAAGGAAGATTTGAAACGCCAGCT
CGGCAGCGTCATTGTATTGGTTAGTGGAGAGACAAGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0043461proton-transporting ATP synthase complex assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007409CBS51388_007409Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007409-T1.exon1CBS51388_007409-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007409-T1.exon2CBS51388_007409-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007409-T1.cdsCBS51388_007409-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007409-T1CBS51388_007409-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264L6D
DBxrefInterPro:IPR011419
DBxrefInterPro:IPR023335
DBxrefInterPro:IPR042272
DBxrefPFAM:PF07542
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:27685..28845 +
Powered by Drupal