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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:56392..61527- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007416-T1 ID=CBS51388_007416-T1|Name=CBS51388_007416-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=5136bp|location=Sequence derived from alignment at An12:56392..61527- (Aspergillus niger CBS 513.88)
ATGCAAAACGGCAGCCCGAACGGAATCTCCCATCAAGATGAACGCGTGAC
CCCCAACCTCGAGGGCCTTCCGACCGACCTGCCTGCGTCTGAGCCTCCGA
TCGAGTCGCTGAGCCGGGATTCGACCTCTGCCGACCTCAAAGAAGAAGAC
GGTACTACGACCGCAGTCGACCAGCTCGAAGGACCTCCTTCTAAGAAACG
AAAGCTCGCCGGTCCTTCCTCCTCTCGTCGCTCAACCTCCCGTCCAGCAT
CCCCCCCGTGGAAAAAGGCCGGCGTCGATGGTCCGACATCTTTCATCCAA
GATGGGAGGCGTAAGTCCTCTCGCGTTAACGCGATCCCGCTCCAGTTGCA
AAGTCCATCCGAGAAAAGGAGCACGCGCGGCGCTCAGAATAAGGTCATAG
GCCGGAATGTTTCCGGTGCTACGAAGGGAGTCGCGTCGTCTCCGTTGTCG
ATGTCCCCGCCTCAGCCGGAGCCAAATGGGAGGTTGGCTGGTGGCAGCGC
CGCAGTCAATGGTTCCCCAAGGAACGCGACCACCAGAGGGTCGGCCAGCA
GGCGCCACCAGATCTCTCAGTCACCAGCTCCCAAGCAATCTCATACGCGA
ACACGATCTTACAGCTCTGGTACGGCGCGTCGATCGTCGAATATTGGCAC
CGCTAGCTCCACTCGCTCACATCGTTCCTCTATGAACAACATTTCGACGA
CTATGGCAGAGACTGGTGATGGCGATTTTGATAATGCAGAAGATGATGAA
GAATATGGCCAGCAAGCGCCACGGCTACGGATTAAGGTCAAAAGACCACC
CATCGGTATCCAGCATCCAGGCCACGTTCTAGCTCCGCGGAAGTATGGCT
CATTCAAGGAATGGTTGGAGAGTGATGACGGGCGAATAAGGGATCCATCC
GTGCTCACACCAGCTGACGCACTTGAGGAGGCTCTAAAGAGGCGTCGAAT
AGCTGTGGCAGCTGAACCGGGCGGACTGTTAAGTCCAGATGTCTGTTCTG
CATACTTGCCCGAGCAACAAGAGGAACCTCCCCAGCAATACTCCCATCAA
GACCATTTGGTCGCGCACGCTCTCTATTTCAAGAAGCTTCTCGACCAGGA
ACACAGACGTCATCGAAATACGGCCAAGCTATTCGCTCAGTGGTGCGCGG
ATGCGTGGCGGAAGCGCAATAAGGATCCGGAGGACATCCTCCGGGAACAG
CAGGAGGAAATGCGTGGGAAGCGCAAACAGCTGGCTAAGGATCTCCAGAA
AATGTTCGACCTTGCGCGAGCGGAGGTGGATCGGATGCGCCTGGCACGCT
GGGAGGAGGAGCGGAAGGCTGAAGATCAGCAAGCTCTGGATCGTGCTATC
AAGCAATCTACAATGCTTTTTGAGAAAAGGCGCATGGAGATTCTCGGCGA
AGGTGGGAGCGACGCACCCGATACCAGTGATGCAGAACAGGAGGATTCGG
ATGAGCTATTGGGTGGTTCGGAAGATGAAGACAATATGTCGTCGACCGAT
TCAGAAAGTGAAGATGAAAATAATGTAGATGATGACGAAGGCTTGACAGC
AGAGGAACTGCGGTTGAAATACGCTAATTTACCCAACACCAACCATGATT
CTGACCACGAGTCCGTGGTCTCTGATGCTACAGCATTTTCCGACGAGAGT
GACACCTCAGAAGTTGATCGTTCTGTGGACCGTGCTACTGAGTCTCTCGA
TCCATCGGCAGAGGTGCAACCAGAGCTTGAAGATGTGGATCCCGTGCTCC
TGGACGACAGTGAAGACGAGTCCACTGATATGGATGATGATATGGGCGAC
ACCGATGAGGATGAATCTGACGAGCCCGACTCCGATGCAGAGAGTGATGG
ACCCGGGCTATTAGGTTTCTTCTCCTCCAAGGACATAGCAACGAACTATG
GCGGATCGCAGAGCGATGTTGATGGTGGAGATAATGCCATTATCGACGAC
TTAGATACCAAACTAGCATCGGCTGGGGAAGATGGGGAGGAGGAAGAGGA
ACCGGAAGATCCTGATGAAGTCTCCCTTGTGCCTAATGGACCGGCGCTAG
AAATGTCGATACTCAATGATGAAGAGGAAGCCGTTTCTGCGCCCGAGCCT
GATCCAGCCCCGACGTCCCCTTCTGCCCCCGACTCCGCTGTTCATTTAAC
TGCTGATGCTGAGCCAAAGGCTGCTGTTGAATCTGCGTCAGAATTGACTC
CCGCGCCTACTCCAGCCGCGGACAAAACACCTGATGTTGAGATGACAGAC
GCCAGTTACAACGGGGACGCAGTTCTGCCCGACGCATCTGATGCAGTGGC
TCAGACTAACCCCCATGAAGAGCATGAACACACCCGCCACGAAGCTTACC
AAAGCGGCGAGCCCTCAAGTGAAGCATCACCGGGCACGCTTGTCACCAAG
CCATCGGAGCCCGAATCCATCTCCTCGTACGAAACACCGGAGAAACACCC
ACAGCCCAGCGAATCCCCTGCTCCCGGATTGAAGACCCCGGTGCCGCACC
TTCTCCGAGGCACTCTGCGGGAGTACCAGCATTTCGGTCTGGATTGGCTT
GCTGGCCTGTATACAAACCACATCAATGGCATCCTGGCAGATGAAATGGG
CCTCGGTAAAACAATCCAAACGATAGCGCTTCTGGCGCACTTGGCCGTGG
AGCACGAGGTTTGGGGGCCACACTTAGTCGTCGTGCCTACTAGTGTGATT
CTCAACTGGGAGATGGAGTTTAAGAAGTGGTGCCCCGGATTCAAAATCAT
GACGTATTACGGAAACCAAGAGGAGCGTCGACAGAAGCGAAAGGGCTGGA
TGGATGATACGAGTTGGAATGTGTTGATCACCTCTTACCAACTAGTCCTC
CAGGATCAGCAAGTTCTGAAAAGAAGAAGCTGGCATTATATGATTCTTGA
CGAGGCACACAACATCAAGAACTTCCGCTCGCAAAGGTGGCAGGCACTGC
TCACTTTCAGGACACGAGCCCGACTCTTGTTAACCGGCACACCGCTTCAA
AACAATCTGACTGAACTATGGTCGTTGCTGTTCTTCTTGATGCCCTCTGA
TGGCGATGAGGAAGGGATCGAAGGGTTCGCTGATCTCAGGAACTTTTCTG
AGTGGTTCCGACGCCCCGTGGAGCAGATCTTGGAGCATGGCAGGGAGACA
ATGGATGATGAAGCAAAGCGAGTGGTCACCAAGCTTCACACTGTACTCCG
ACCCTACATTTTGCGTCGTCTCAAAGCCGATGTGGAGAAGCAGATGCCGG
CGAAGTACGAACATGTCGTTTATTGCAGACTCTCGAAGCGTCAAAGATTC
CTCTATGATGGCTTTATGTCTCGCGCACAGACCAAGGAGACGCTTGCGTC
TGGAAATTACCTGTCCATCATCAACTGTCTAATGCAACTACGGAAGGTGT
GCAATCATCCCGATCTCTTCGAAACTCGGCCCATATCTACGTCGTTTGCC
ATGTCTCGCTCTGTGGTCACGGAATATGAGATCAAAGACCTTCTCGTCCG
TCGGCGCCTATTGTATGAGCATCCACTCACCAAGCTCGACCTTGATTTCC
TCAACCTAGTACCCATATCCCGAGAAGATATTTCTCGGCGGTTGGCCGAT
GACAGTACCCGTCTCATGGCTTATGGTCCCTTCAACACGCTCAGGGAACG
CCAGTATCACCGTACCAACTGGCAGATGAGCTTCGATGGTACCACGGTGC
AGTCCACATTAGACGCTCTGGAGAATGAGTCCAGGAAAAGGAGGATGGCA
GAGCTCGAGAGATGTCTTTATTTTGAGTCAAAGCGCCATGGTCGTCGCCC
GGTGTACGGATCAAGTCTCATCGAATTTCTCACGGCCGACAGTAAGCAGC
GGCCTACCGCCAACGGGCCCCTACGGAAACGCTCCTTAGCCGACTGGCTG
TCGAGCCAGTCGTCAGTCCTCGCATCGATGATCTTGTCCATTGAAGAACG
GTCCCAGGCAATGGACGGTTATGTTCAGAGATTCGCTTGCGTTACCCCTG
CTGCCGTGGCGACTGGTATCACCGAGGCTGCCCTGACTCCCATAGAGACG
AGGTATCTCACGAAGAAGGAACGGTTCCCGCCATATGACCCCTTTCACGA
GGCACAGATGCGTCTTTCGATCGCATTCCCCGACAAGAGACTTTTGCAGT
ACGACTGTGGCAAGTTGCAAAGACTCGATAAATTGCTTCGGGACCTCAAA
GCAGGTGGCCACCGAGCTTTGATCTTCACCCAGATGACCAAGATGCTCGA
CATCTTGGAACAGTTCCTTAACATCCACGGACACCGATACCTCCGTCTAG
ACGGTACGACGAAAGTTGAGCAGCGTCAGATCCTTACCGATCGGTTCAAC
AACGACAACCGTATCCTCGCATTTATCTTGTCCAGTCGTTCCGGTGGTCT
GGGTATCAACCTCACAGGTGCTGACACCGTCATATTCTACGACCTAGACT
GGAACCCCGCGATGGACAAGCAGTGTCAAGATCGTTGTCACCGTATCGGC
CAAACACGCGACGTGCACATCTATCGATTCGTTTCTGAATATACCATTGA
ATCAAACATCCTCCGTAAAGCCAACCAGAAGCGCATGCTTGACGACGTCG
TCATCCAAGAGGGAGAGTTTACAACGGATTACTTCACTAAACTAGACGTC
CGCGATATGATTGACACTGAAGACGTCCTTGAAGGTCACGACGAAGCCAG
CGCAGCCATGGATCGGGTCCTCGAGAACCGCGTCGCAGCCAGTTCACGTG
TTTTCGAACAAGCCGAAGACAAAGAAGATATCGATGCGGCCAAGAATGCA
CAAAAGGAATTGGAACACGCGGACGACGGCGACTTCGACGACCGCACACC
TGGCCAAACCCAGGCCGGCACACCGCTGGCAACTGGGCCCACGACCGGGC
CCGATGAATCAACAACAGCGAACACCACTCCCGGTCCACAATTACTCACC
TCACCGCAGGTGCATGCGGTCGACGAACCCGTAGACGTCGAGCCCCAACC
TGGCCATATCGATAATTACCTACTACGGTTTATGGAGTGGAATATGAAGG
ACGAACCACTTGTCTTACCAGCGGATAAGAGCAAAAAGAAGTCCAAGAAA
GGCAAGGAGCACCGGCTCCGTAAAAGGCGTCGTTGA back to topCoding sequence (CDS) from alignment at An12:56392..61527- >CBS51388_007416-T1 ID=CBS51388_007416-T1|Name=CBS51388_007416-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5136bp|location=Sequence derived from alignment at An12:56392..61527- (Aspergillus niger CBS 513.88)
ATGCAAAACGGCAGCCCGAACGGAATCTCCCATCAAGATGAACGCGTGAC
CCCCAACCTCGAGGGCCTTCCGACCGACCTGCCTGCGTCTGAGCCTCCGA
TCGAGTCGCTGAGCCGGGATTCGACCTCTGCCGACCTCAAAGAAGAAGAC
GGTACTACGACCGCAGTCGACCAGCTCGAAGGACCTCCTTCTAAGAAACG
AAAGCTCGCCGGTCCTTCCTCCTCTCGTCGCTCAACCTCCCGTCCAGCAT
CCCCCCCGTGGAAAAAGGCCGGCGTCGATGGTCCGACATCTTTCATCCAA
GATGGGAGGCGTAAGTCCTCTCGCGTTAACGCGATCCCGCTCCAGTTGCA
AAGTCCATCCGAGAAAAGGAGCACGCGCGGCGCTCAGAATAAGGTCATAG
GCCGGAATGTTTCCGGTGCTACGAAGGGAGTCGCGTCGTCTCCGTTGTCG
ATGTCCCCGCCTCAGCCGGAGCCAAATGGGAGGTTGGCTGGTGGCAGCGC
CGCAGTCAATGGTTCCCCAAGGAACGCGACCACCAGAGGGTCGGCCAGCA
GGCGCCACCAGATCTCTCAGTCACCAGCTCCCAAGCAATCTCATACGCGA
ACACGATCTTACAGCTCTGGTACGGCGCGTCGATCGTCGAATATTGGCAC
CGCTAGCTCCACTCGCTCACATCGTTCCTCTATGAACAACATTTCGACGA
CTATGGCAGAGACTGGTGATGGCGATTTTGATAATGCAGAAGATGATGAA
GAATATGGCCAGCAAGCGCCACGGCTACGGATTAAGGTCAAAAGACCACC
CATCGGTATCCAGCATCCAGGCCACGTTCTAGCTCCGCGGAAGTATGGCT
CATTCAAGGAATGGTTGGAGAGTGATGACGGGCGAATAAGGGATCCATCC
GTGCTCACACCAGCTGACGCACTTGAGGAGGCTCTAAAGAGGCGTCGAAT
AGCTGTGGCAGCTGAACCGGGCGGACTGTTAAGTCCAGATGTCTGTTCTG
CATACTTGCCCGAGCAACAAGAGGAACCTCCCCAGCAATACTCCCATCAA
GACCATTTGGTCGCGCACGCTCTCTATTTCAAGAAGCTTCTCGACCAGGA
ACACAGACGTCATCGAAATACGGCCAAGCTATTCGCTCAGTGGTGCGCGG
ATGCGTGGCGGAAGCGCAATAAGGATCCGGAGGACATCCTCCGGGAACAG
CAGGAGGAAATGCGTGGGAAGCGCAAACAGCTGGCTAAGGATCTCCAGAA
AATGTTCGACCTTGCGCGAGCGGAGGTGGATCGGATGCGCCTGGCACGCT
GGGAGGAGGAGCGGAAGGCTGAAGATCAGCAAGCTCTGGATCGTGCTATC
AAGCAATCTACAATGCTTTTTGAGAAAAGGCGCATGGAGATTCTCGGCGA
AGGTGGGAGCGACGCACCCGATACCAGTGATGCAGAACAGGAGGATTCGG
ATGAGCTATTGGGTGGTTCGGAAGATGAAGACAATATGTCGTCGACCGAT
TCAGAAAGTGAAGATGAAAATAATGTAGATGATGACGAAGGCTTGACAGC
AGAGGAACTGCGGTTGAAATACGCTAATTTACCCAACACCAACCATGATT
CTGACCACGAGTCCGTGGTCTCTGATGCTACAGCATTTTCCGACGAGAGT
GACACCTCAGAAGTTGATCGTTCTGTGGACCGTGCTACTGAGTCTCTCGA
TCCATCGGCAGAGGTGCAACCAGAGCTTGAAGATGTGGATCCCGTGCTCC
TGGACGACAGTGAAGACGAGTCCACTGATATGGATGATGATATGGGCGAC
ACCGATGAGGATGAATCTGACGAGCCCGACTCCGATGCAGAGAGTGATGG
ACCCGGGCTATTAGGTTTCTTCTCCTCCAAGGACATAGCAACGAACTATG
GCGGATCGCAGAGCGATGTTGATGGTGGAGATAATGCCATTATCGACGAC
TTAGATACCAAACTAGCATCGGCTGGGGAAGATGGGGAGGAGGAAGAGGA
ACCGGAAGATCCTGATGAAGTCTCCCTTGTGCCTAATGGACCGGCGCTAG
AAATGTCGATACTCAATGATGAAGAGGAAGCCGTTTCTGCGCCCGAGCCT
GATCCAGCCCCGACGTCCCCTTCTGCCCCCGACTCCGCTGTTCATTTAAC
TGCTGATGCTGAGCCAAAGGCTGCTGTTGAATCTGCGTCAGAATTGACTC
CCGCGCCTACTCCAGCCGCGGACAAAACACCTGATGTTGAGATGACAGAC
GCCAGTTACAACGGGGACGCAGTTCTGCCCGACGCATCTGATGCAGTGGC
TCAGACTAACCCCCATGAAGAGCATGAACACACCCGCCACGAAGCTTACC
AAAGCGGCGAGCCCTCAAGTGAAGCATCACCGGGCACGCTTGTCACCAAG
CCATCGGAGCCCGAATCCATCTCCTCGTACGAAACACCGGAGAAACACCC
ACAGCCCAGCGAATCCCCTGCTCCCGGATTGAAGACCCCGGTGCCGCACC
TTCTCCGAGGCACTCTGCGGGAGTACCAGCATTTCGGTCTGGATTGGCTT
GCTGGCCTGTATACAAACCACATCAATGGCATCCTGGCAGATGAAATGGG
CCTCGGTAAAACAATCCAAACGATAGCGCTTCTGGCGCACTTGGCCGTGG
AGCACGAGGTTTGGGGGCCACACTTAGTCGTCGTGCCTACTAGTGTGATT
CTCAACTGGGAGATGGAGTTTAAGAAGTGGTGCCCCGGATTCAAAATCAT
GACGTATTACGGAAACCAAGAGGAGCGTCGACAGAAGCGAAAGGGCTGGA
TGGATGATACGAGTTGGAATGTGTTGATCACCTCTTACCAACTAGTCCTC
CAGGATCAGCAAGTTCTGAAAAGAAGAAGCTGGCATTATATGATTCTTGA
CGAGGCACACAACATCAAGAACTTCCGCTCGCAAAGGTGGCAGGCACTGC
TCACTTTCAGGACACGAGCCCGACTCTTGTTAACCGGCACACCGCTTCAA
AACAATCTGACTGAACTATGGTCGTTGCTGTTCTTCTTGATGCCCTCTGA
TGGCGATGAGGAAGGGATCGAAGGGTTCGCTGATCTCAGGAACTTTTCTG
AGTGGTTCCGACGCCCCGTGGAGCAGATCTTGGAGCATGGCAGGGAGACA
ATGGATGATGAAGCAAAGCGAGTGGTCACCAAGCTTCACACTGTACTCCG
ACCCTACATTTTGCGTCGTCTCAAAGCCGATGTGGAGAAGCAGATGCCGG
CGAAGTACGAACATGTCGTTTATTGCAGACTCTCGAAGCGTCAAAGATTC
CTCTATGATGGCTTTATGTCTCGCGCACAGACCAAGGAGACGCTTGCGTC
TGGAAATTACCTGTCCATCATCAACTGTCTAATGCAACTACGGAAGGTGT
GCAATCATCCCGATCTCTTCGAAACTCGGCCCATATCTACGTCGTTTGCC
ATGTCTCGCTCTGTGGTCACGGAATATGAGATCAAAGACCTTCTCGTCCG
TCGGCGCCTATTGTATGAGCATCCACTCACCAAGCTCGACCTTGATTTCC
TCAACCTAGTACCCATATCCCGAGAAGATATTTCTCGGCGGTTGGCCGAT
GACAGTACCCGTCTCATGGCTTATGGTCCCTTCAACACGCTCAGGGAACG
CCAGTATCACCGTACCAACTGGCAGATGAGCTTCGATGGTACCACGGTGC
AGTCCACATTAGACGCTCTGGAGAATGAGTCCAGGAAAAGGAGGATGGCA
GAGCTCGAGAGATGTCTTTATTTTGAGTCAAAGCGCCATGGTCGTCGCCC
GGTGTACGGATCAAGTCTCATCGAATTTCTCACGGCCGACAGTAAGCAGC
GGCCTACCGCCAACGGGCCCCTACGGAAACGCTCCTTAGCCGACTGGCTG
TCGAGCCAGTCGTCAGTCCTCGCATCGATGATCTTGTCCATTGAAGAACG
GTCCCAGGCAATGGACGGTTATGTTCAGAGATTCGCTTGCGTTACCCCTG
CTGCCGTGGCGACTGGTATCACCGAGGCTGCCCTGACTCCCATAGAGACG
AGGTATCTCACGAAGAAGGAACGGTTCCCGCCATATGACCCCTTTCACGA
GGCACAGATGCGTCTTTCGATCGCATTCCCCGACAAGAGACTTTTGCAGT
ACGACTGTGGCAAGTTGCAAAGACTCGATAAATTGCTTCGGGACCTCAAA
GCAGGTGGCCACCGAGCTTTGATCTTCACCCAGATGACCAAGATGCTCGA
CATCTTGGAACAGTTCCTTAACATCCACGGACACCGATACCTCCGTCTAG
ACGGTACGACGAAAGTTGAGCAGCGTCAGATCCTTACCGATCGGTTCAAC
AACGACAACCGTATCCTCGCATTTATCTTGTCCAGTCGTTCCGGTGGTCT
GGGTATCAACCTCACAGGTGCTGACACCGTCATATTCTACGACCTAGACT
GGAACCCCGCGATGGACAAGCAGTGTCAAGATCGTTGTCACCGTATCGGC
CAAACACGCGACGTGCACATCTATCGATTCGTTTCTGAATATACCATTGA
ATCAAACATCCTCCGTAAAGCCAACCAGAAGCGCATGCTTGACGACGTCG
TCATCCAAGAGGGAGAGTTTACAACGGATTACTTCACTAAACTAGACGTC
CGCGATATGATTGACACTGAAGACGTCCTTGAAGGTCACGACGAAGCCAG
CGCAGCCATGGATCGGGTCCTCGAGAACCGCGTCGCAGCCAGTTCACGTG
TTTTCGAACAAGCCGAAGACAAAGAAGATATCGATGCGGCCAAGAATGCA
CAAAAGGAATTGGAACACGCGGACGACGGCGACTTCGACGACCGCACACC
TGGCCAAACCCAGGCCGGCACACCGCTGGCAACTGGGCCCACGACCGGGC
CCGATGAATCAACAACAGCGAACACCACTCCCGGTCCACAATTACTCACC
TCACCGCAGGTGCATGCGGTCGACGAACCCGTAGACGTCGAGCCCCAACC
TGGCCATATCGATAATTACCTACTACGGTTTATGGAGTGGAATATGAAGG
ACGAACCACTTGTCTTACCAGCGGATAAGAGCAAAAAGAAGTCCAAGAAA
GGCAAGGAGCACCGGCTCCGTAAAAGGCGTCGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR002464 |
| DBxref | InterPro:IPR038718 |
| DBxref | InterPro:IPR000330 |
| DBxref | InterPro:IPR014012 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF00176 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF07529 |
| DBxref | PFAM:PF00271 |
| Product | swr1 complex component |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:56392..61527 - |
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