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CBS51388_007427-T1, CBS51388_007427-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007427-T1
Unique NameCBS51388_007427-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:88424..89329+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007427-T1 ID=CBS51388_007427-T1|Name=CBS51388_007427-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=906bp|location=Sequence derived from alignment at An12:88424..89329+ (Aspergillus niger CBS 513.88)
ATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGTAAGTTGTTCA
TTCGCTTCACTTGACCAGTAACCCCTTACTAACCTCCTGACCTTGACAGG
CTGTGGAAGTCAGTAAGCTGCATGCGTATAGTTGGCGCTCGAACACCCCT
CAGGAGACGAGCGAAGCCGGCTTGGGATGGACAGGCAACTGACATACACC
CGACATTACTAGGACGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACAT
TAACTTACGGTACAATTGTCGCGCAACTTTGCCAGGACTACGATGGAAAT
TACCAAGAAGTGAACAAGCAACTGGAGAAGATGGGTTACAATATTGGAAT
GCGACTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTA
ATTTCCGGGAAACGGCGGATATGATCGCAAAGGTATGTTGAGGCCAACAG
GTGGAGTAATTGGTCGAAAGTATATGGGCTTCTGTGGGCTGACGAGTTTA
ATGCCCACTGCAGGTTGGGTTCAGGATCTTCCTCAACATCGCACCCACCG
TCACCAATTGGACGAGTGACAACAACCAATTCTCTCTCATATTTGAAGAA
AACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGA
TGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGG
AGATGGTAAGACGGCGTACTGCAGGGAGTTGATCTGTTCTCTGCTAGCCA
CTTCCATGCATGTATTTGTGCTAATTCTGGGAACAGGTGCAAATGCAGAT
CGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACGGAAA
TGCGGGTGTCACTTGTACGGTACATTGAGGATGAGATGCCACCCGATGAG
GAGTAA
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Coding sequence (CDS) from alignment at An12:88424..89329+

>CBS51388_007427-T1 ID=CBS51388_007427-T1|Name=CBS51388_007427-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2280bp|location=Sequence derived from alignment at An12:88424..89329+ (Aspergillus niger CBS 513.88)
ATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGACGAGAGTTGA
CAAAGTGAACGCCGAGTTGGTAACATTAACTTACGGTACAATTGTCGCGC
AACTTTGCCAGGACTACGATGGAAATTACCAAGAAGTGAACAAGCAACTG
GAGAAGATGGGTTACAATATTGGAATGCGACTTATCGAGGACTTTTTGGC
CAAGTCGGGCGTCGGCCGATGTGCTAATTTCCGGGAAACGGCGGATATGA
TCGCAAAGGTTGGGTTCAGGATCTTCCTCAACATCGCACCCACCGTCACC
AATTGGACGAGTGACAACAACCAATTCTCTCTCATATTTGAAGAAAACCC
GTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGATGAGC
TGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGGAGATG
GTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGA
TGACACAACGGAAATGCGGGTGTCACTTGTACGGTACATTGAGGATGAGA
TGCCACCCGATGAGGAGTAAATGTCATCTGCAACAAAAGCATCTAGGATT
GGGGAAGAGACGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACATTAAC
TTACGGTACAATTGTCGCGCAACTTTGCCAGGACTACGATGGAAATTACC
AAGAAGTGAACAAGCAACTGGAGAAGATGGGTTACAATATTGGAATGCGA
CTTATCGAGGACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTT
CCGGGAAACGGCGGATATGATCGCAAAGGTTGGGTTCAGGATCTTCCTCA
ACATCGCACCCACCGTCACCAATTGGACGAGTGACAACAACCAATTCTCT
CTCATATTTGAAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGA
CGGACGGGCTCAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTC
TGCGGGGTGCATTGGAGATGGTGCAAATGCAGATCGAGGCGCATTTTGTG
AGCGACGTTTTGCGGGGCGATGACACAACGGAAATGCGGGTGTCACTTGT
ACGGTACATTGAGGATGAGATGCCACCCGATGAGGAGTAAATGTCATCTG
CAACAAAAGCATCTAGGATTGGGGAAGAGACGAGAGTTGACAAAGTGAAC
GCCGAGTTGGTAACATTAACTTACGGTACAATTGTCGCGCAACTTTGCCA
GGACTACGATGGAAATTACCAAGAAGTGAACAAGCAACTGGAGAAGATGG
GTTACAATATTGGAATGCGACTTATCGAGGACTTTTTGGCCAAGTCGGGC
GTCGGCCGATGTGCTAATTTCCGGGAAACGGCGGATATGATCGCAAAGGT
TGGGTTCAGGATCTTCCTCAACATCGCACCCACCGTCACCAATTGGACGA
GTGACAACAACCAATTCTCTCTCATATTTGAAGAAAACCCGTTGGCAGAT
TTTGTTGAGTTGCCCGATGACGGACGGGCTCAAGATGAGCTGTGGTTTTC
CAATATCCTCTGTGGAGTTCTGCGGGGTGCATTGGAGATGGTGCAAATGC
AGATCGAGGCGCATTTTGTGAGCGACGTTTTGCGGGGCGATGACACAACG
GAAATGCGGGTGTCACTTGTACGGTACATTGAGGATGAGATGCCACCCGA
TGAGGAGTAAATGTCATCTGCAACAAAAGCATCTAGGATTGGGGAAGAGA
CGAGAGTTGACAAAGTGAACGCCGAGTTGGTAACATTAACTTACGGTACA
ATTGTCGCGCAACTTTGCCAGGACTACGATGGAAATTACCAAGAAGTGAA
CAAGCAACTGGAGAAGATGGGTTACAATATTGGAATGCGACTTATCGAGG
ACTTTTTGGCCAAGTCGGGCGTCGGCCGATGTGCTAATTTCCGGGAAACG
GCGGATATGATCGCAAAGGTTGGGTTCAGGATCTTCCTCAACATCGCACC
CACCGTCACCAATTGGACGAGTGACAACAACCAATTCTCTCTCATATTTG
AAGAAAACCCGTTGGCAGATTTTGTTGAGTTGCCCGATGACGGACGGGCT
CAAGATGAGCTGTGGTTTTCCAATATCCTCTGTGGAGTTCTGCGGGGTGC
ATTGGAGATGGTGCAAATGCAGATCGAGGCGCATTTTGTGAGCGACGTTT
TGCGGGGCGATGACACAACGGAAATGCGGGTGTCACTTGTACGGTACATT
GAGGATGAGATGCCACCCGATGAGGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030008TRAPP complex
Vocabulary: Biological Process
TermDefinition
GO:0048193Golgi vesicle transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007427CBS51388_007427Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007427-T1.exon1CBS51388_007427-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007427-T1.exon2CBS51388_007427-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007427-T1.exon3CBS51388_007427-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007427-T1.exon4CBS51388_007427-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007427-T1.cdsCBS51388_007427-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007427-T1CBS51388_007427-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264OM7
DBxrefInterPro:IPR024096
DBxrefInterPro:IPR007194
DBxrefInterPro:IPR016721
DBxrefPFAM:PF04051
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:88424..89329 +
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