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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:112576..114095- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007433-T1 ID=CBS51388_007433-T1|Name=CBS51388_007433-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1520bp|location=Sequence derived from alignment at An12:112576..114095- (Aspergillus niger CBS 513.88)
ATGCCCGGCTCAGACACAAGCGACGAGTTCAACGATGATGTAGCCATCCC
TCTACACCCATGATTCATTATTTCCTATGAGCAATTTACTATTTATCTTA
TAACCATGAATTGACAATCATGTCTTTGACAGGTCTTCATCCTTGATATC
GATAACATTCAAGCCCATGGTATATACTCGTCACTTCTCACTTCCTTTCA
CCTCCGTATACTAATAGTATGTTCAAGGCATCGGAGTAGCGGATATCACA
AAGCTGAAGACGAACGGATACTATACCGTTGCTGTATGGATAGTCCGGTC
TCCTTGATGTTTGAAGAGAGCCTCGCTGTTAACCTGCTCAGTCTGTTCAC
GGTGCCACACGCAAGAACCTGTTGAAGATAAAAGGGTTCAGCGAGGTCAA
GGTCGAGAAAATCAAGGATGCTATTCAGAAGAGCTTGGTATGTATACTAC
ATGATGATATTAGGGGTTATTGTATATGAGTGAGGTGCTAACTGTCTACC
CATACAGCCCTCGGCTTCGGGTTTTATCACGGCAATGGAACTCTGCCATC
AACGGAAGAGGATTGTTAGGATTTCTACTGGGAGTAAACAATTCGATTCT
ATCTTAGGAGGGTAAGTGATTACCTTCCTCTTCTTTACTGCTATAAGGGG
GAAAGGCTAACTTGATATCACCTAGTGGCTTCCAAAGCATGAGCATCAGC
GAAGTCTTCGGCGAGTTCCGATGCGGCAAGACTCAGTTATCGCACACCAT
GTCTGTTGTAGCCCAGCTTCCTAAGGAACTGGGCGGCGCAGGCGGCAAGG
TGGCATATATTGATACCGAGGGAACTTTCAGGCCTGAGCGCATCGCTCAG
ATTGCAGAGCGGTTTGGCGTCGATGCTGATGCTGCCCAGGAGAATATTGC
TTATGCGCGAGCGTTGAACAGCGAGCATCAGCTGGAGTTGTTGAATACCC
TCAGTAAAGAGTTCGCTGGTGGGGAATACAGGTTGTTGATCATTGATAGC
ATCATGAATTGCTTCAGGGTCGACTATTGTGGACGCGGAGAGCTTGCTGA
TCGTCAGCAGAAGTTGAATCAGTTCTTGATGAAGTTGGCTCATATGGCTG
AGGGTATATTTTTCACTCCTGATATATATATATCAAGTACTAGAGGGCTG
ACATTTTCGTTTGCAGAATTCAACATCTGTGTTCTGATGGTCCGTTCCCC
ATCGACATGCAGATAGATAGATATAGTCTAATGCACTGCAGACCAACCAG
GTCCAGAGTGACCCTGGCGCTAGTGCACTCTTCGCTGGAGCCGATGGCCG
CAAGCCCGTTGGAGGTCATGTCCTGGCACATGCATCGGCGACTCGAGTGC
TCCTCCGCAAGGGTCGTGGTGAAGAGCGAGTGGCTAAGATACAGGACTCG
CCAGGTATGCCACAGTGTATACGTCCCATTCTAGTACTTTAACTGTCAAC
AGACTGCCCTGAGAGAGAAGCGACGTATGTCATCACCAATGGTGGGATCA
ATGATCCTGATAAGGCGTAG back to topCoding sequence (CDS) from alignment at An12:112576..114095- >CBS51388_007433-T1 ID=CBS51388_007433-T1|Name=CBS51388_007433-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8040bp|location=Sequence derived from alignment at An12:112576..114095- (Aspergillus niger CBS 513.88)
ACTGCCCTGAGAGAGAAGCGACGTATGTCATCACCAATGGTGGGATCAAT
GATCCTGATAAGGCGTAGACCAACCAGGTCCAGAGTGACCCTGGCGCTAG
TGCACTCTTCGCTGGAGCCGATGGCCGCAAGCCCGTTGGAGGTCATGTCC
TGGCACATGCATCGGCGACTCGAGTGCTCCTCCGCAAGGGTCGTGGTGAA
GAGCGAGTGGCTAAGATACAGGACTCGCCAGAATTCAACATCTGTGTTCT
GATGTGGCTTCCAAAGCATGAGCATCAGCGAAGTCTTCGGCGAGTTCCGA
TGCGGCAAGACTCAGTTATCGCACACCATGTCTGTTGTAGCCCAGCTTCC
TAAGGAACTGGGCGGCGCAGGCGGCAAGGTGGCATATATTGATACCGAGG
GAACTTTCAGGCCTGAGCGCATCGCTCAGATTGCAGAGCGGTTTGGCGTC
GATGCTGATGCTGCCCAGGAGAATATTGCTTATGCGCGAGCGTTGAACAG
CGAGCATCAGCTGGAGTTGTTGAATACCCTCAGTAAAGAGTTCGCTGGTG
GGGAATACAGGTTGTTGATCATTGATAGCATCATGAATTGCTTCAGGGTC
GACTATTGTGGACGCGGAGAGCTTGCTGATCGTCAGCAGAAGTTGAATCA
GTTCTTGATGAAGTTGGCTCATATGGCTGAGGCCCTCGGCTTCGGGTTTT
ATCACGGCAATGGAACTCTGCCATCAACGGAAGAGGATTGTTAGGATTTC
TACTGGGAGTAAACAATTCGATTCTATCTTAGGAGGTCTGTTCACGGTGC
CACACGCAAGAACCTGTTGAAGATAAAAGGGTTCAGCGAGGTCAAGGTCG
AGAAAATCAAGGATGCTATTCAGAAGAGCTTGGTCTTCATCCTTGATATC
GATAACATTCAAGCCCATGGTATATACTCGTCACTTCTCACTTCCTTTCA
CCTCCGTATACTAATAATGCCCGGCTCAGACACAAGCGACGAGTTCAACG
ATGATACTGCCCTGAGAGAGAAGCGACGTATGTCATCACCAATGGTGGGA
TCAATGATCCTGATAAGGCGTAGACCAACCAGGTCCAGAGTGACCCTGGC
GCTAGTGCACTCTTCGCTGGAGCCGATGGCCGCAAGCCCGTTGGAGGTCA
TGTCCTGGCACATGCATCGGCGACTCGAGTGCTCCTCCGCAAGGGTCGTG
GTGAAGAGCGAGTGGCTAAGATACAGGACTCGCCAGAATTCAACATCTGT
GTTCTGATGTGGCTTCCAAAGCATGAGCATCAGCGAAGTCTTCGGCGAGT
TCCGATGCGGCAAGACTCAGTTATCGCACACCATGTCTGTTGTAGCCCAG
CTTCCTAAGGAACTGGGCGGCGCAGGCGGCAAGGTGGCATATATTGATAC
CGAGGGAACTTTCAGGCCTGAGCGCATCGCTCAGATTGCAGAGCGGTTTG
GCGTCGATGCTGATGCTGCCCAGGAGAATATTGCTTATGCGCGAGCGTTG
AACAGCGAGCATCAGCTGGAGTTGTTGAATACCCTCAGTAAAGAGTTCGC
TGGTGGGGAATACAGGTTGTTGATCATTGATAGCATCATGAATTGCTTCA
GGGTCGACTATTGTGGACGCGGAGAGCTTGCTGATCGTCAGCAGAAGTTG
AATCAGTTCTTGATGAAGTTGGCTCATATGGCTGAGGCCCTCGGCTTCGG
GTTTTATCACGGCAATGGAACTCTGCCATCAACGGAAGAGGATTGTTAGG
ATTTCTACTGGGAGTAAACAATTCGATTCTATCTTAGGAGGTCTGTTCAC
GGTGCCACACGCAAGAACCTGTTGAAGATAAAAGGGTTCAGCGAGGTCAA
GGTCGAGAAAATCAAGGATGCTATTCAGAAGAGCTTGGTCTTCATCCTTG
ATATCGATAACATTCAAGCCCATGGTATATACTCGTCACTTCTCACTTCC
TTTCACCTCCGTATACTAATAATGCCCGGCTCAGACACAAGCGACGAGTT
CAACGATGATACTGCCCTGAGAGAGAAGCGACGTATGTCATCACCAATGG
TGGGATCAATGATCCTGATAAGGCGTAGACCAACCAGGTCCAGAGTGACC
CTGGCGCTAGTGCACTCTTCGCTGGAGCCGATGGCCGCAAGCCCGTTGGA
GGTCATGTCCTGGCACATGCATCGGCGACTCGAGTGCTCCTCCGCAAGGG
TCGTGGTGAAGAGCGAGTGGCTAAGATACAGGACTCGCCAGAATTCAACA
TCTGTGTTCTGATGTGGCTTCCAAAGCATGAGCATCAGCGAAGTCTTCGG
CGAGTTCCGATGCGGCAAGACTCAGTTATCGCACACCATGTCTGTTGTAG
CCCAGCTTCCTAAGGAACTGGGCGGCGCAGGCGGCAAGGTGGCATATATT
GATACCGAGGGAACTTTCAGGCCTGAGCGCATCGCTCAGATTGCAGAGCG
GTTTGGCGTCGATGCTGATGCTGCCCAGGAGAATATTGCTTATGCGCGAG
CGTTGAACAGCGAGCATCAGCTGGAGTTGTTGAATACCCTCAGTAAAGAG
TTCGCTGGTGGGGAATACAGGTTGTTGATCATTGATAGCATCATGAATTG
CTTCAGGGTCGACTATTGTGGACGCGGAGAGCTTGCTGATCGTCAGCAGA
AGTTGAATCAGTTCTTGATGAAGTTGGCTCATATGGCTGAGGCCCTCGGC
TTCGGGTTTTATCACGGCAATGGAACTCTGCCATCAACGGAAGAGGATTG
TTAGGATTTCTACTGGGAGTAAACAATTCGATTCTATCTTAGGAGGTCTG
TTCACGGTGCCACACGCAAGAACCTGTTGAAGATAAAAGGGTTCAGCGAG
GTCAAGGTCGAGAAAATCAAGGATGCTATTCAGAAGAGCTTGGTCTTCAT
CCTTGATATCGATAACATTCAAGCCCATGGTATATACTCGTCACTTCTCA
CTTCCTTTCACCTCCGTATACTAATAATGCCCGGCTCAGACACAAGCGAC
GAGTTCAACGATGATACTGCCCTGAGAGAGAAGCGACGTATGTCATCACC
AATGGTGGGATCAATGATCCTGATAAGGCGTAGACCAACCAGGTCCAGAG
TGACCCTGGCGCTAGTGCACTCTTCGCTGGAGCCGATGGCCGCAAGCCCG
TTGGAGGTCATGTCCTGGCACATGCATCGGCGACTCGAGTGCTCCTCCGC
AAGGGTCGTGGTGAAGAGCGAGTGGCTAAGATACAGGACTCGCCAGAATT
CAACATCTGTGTTCTGATGTGGCTTCCAAAGCATGAGCATCAGCGAAGTC
TTCGGCGAGTTCCGATGCGGCAAGACTCAGTTATCGCACACCATGTCTGT
TGTAGCCCAGCTTCCTAAGGAACTGGGCGGCGCAGGCGGCAAGGTGGCAT
ATATTGATACCGAGGGAACTTTCAGGCCTGAGCGCATCGCTCAGATTGCA
GAGCGGTTTGGCGTCGATGCTGATGCTGCCCAGGAGAATATTGCTTATGC
GCGAGCGTTGAACAGCGAGCATCAGCTGGAGTTGTTGAATACCCTCAGTA
AAGAGTTCGCTGGTGGGGAATACAGGTTGTTGATCATTGATAGCATCATG
AATTGCTTCAGGGTCGACTATTGTGGACGCGGAGAGCTTGCTGATCGTCA
GCAGAAGTTGAATCAGTTCTTGATGAAGTTGGCTCATATGGCTGAGGCCC
TCGGCTTCGGGTTTTATCACGGCAATGGAACTCTGCCATCAACGGAAGAG
GATTGTTAGGATTTCTACTGGGAGTAAACAATTCGATTCTATCTTAGGAG
GTCTGTTCACGGTGCCACACGCAAGAACCTGTTGAAGATAAAAGGGTTCA
GCGAGGTCAAGGTCGAGAAAATCAAGGATGCTATTCAGAAGAGCTTGGTC
TTCATCCTTGATATCGATAACATTCAAGCCCATGGTATATACTCGTCACT
TCTCACTTCCTTTCACCTCCGTATACTAATAATGCCCGGCTCAGACACAA
GCGACGAGTTCAACGATGATACTGCCCTGAGAGAGAAGCGACGTATGTCA
TCACCAATGGTGGGATCAATGATCCTGATAAGGCGTAGACCAACCAGGTC
CAGAGTGACCCTGGCGCTAGTGCACTCTTCGCTGGAGCCGATGGCCGCAA
GCCCGTTGGAGGTCATGTCCTGGCACATGCATCGGCGACTCGAGTGCTCC
TCCGCAAGGGTCGTGGTGAAGAGCGAGTGGCTAAGATACAGGACTCGCCA
GAATTCAACATCTGTGTTCTGATGTGGCTTCCAAAGCATGAGCATCAGCG
AAGTCTTCGGCGAGTTCCGATGCGGCAAGACTCAGTTATCGCACACCATG
TCTGTTGTAGCCCAGCTTCCTAAGGAACTGGGCGGCGCAGGCGGCAAGGT
GGCATATATTGATACCGAGGGAACTTTCAGGCCTGAGCGCATCGCTCAGA
TTGCAGAGCGGTTTGGCGTCGATGCTGATGCTGCCCAGGAGAATATTGCT
TATGCGCGAGCGTTGAACAGCGAGCATCAGCTGGAGTTGTTGAATACCCT
CAGTAAAGAGTTCGCTGGTGGGGAATACAGGTTGTTGATCATTGATAGCA
TCATGAATTGCTTCAGGGTCGACTATTGTGGACGCGGAGAGCTTGCTGAT
CGTCAGCAGAAGTTGAATCAGTTCTTGATGAAGTTGGCTCATATGGCTGA
GGCCCTCGGCTTCGGGTTTTATCACGGCAATGGAACTCTGCCATCAACGG
AAGAGGATTGTTAGGATTTCTACTGGGAGTAAACAATTCGATTCTATCTT
AGGAGGTCTGTTCACGGTGCCACACGCAAGAACCTGTTGAAGATAAAAGG
GTTCAGCGAGGTCAAGGTCGAGAAAATCAAGGATGCTATTCAGAAGAGCT
TGGTCTTCATCCTTGATATCGATAACATTCAAGCCCATGGTATATACTCG
TCACTTCTCACTTCCTTTCACCTCCGTATACTAATAATGCCCGGCTCAGA
CACAAGCGACGAGTTCAACGATGATACTGCCCTGAGAGAGAAGCGACGTA
TGTCATCACCAATGGTGGGATCAATGATCCTGATAAGGCGTAGACCAACC
AGGTCCAGAGTGACCCTGGCGCTAGTGCACTCTTCGCTGGAGCCGATGGC
CGCAAGCCCGTTGGAGGTCATGTCCTGGCACATGCATCGGCGACTCGAGT
GCTCCTCCGCAAGGGTCGTGGTGAAGAGCGAGTGGCTAAGATACAGGACT
CGCCAGAATTCAACATCTGTGTTCTGATGTGGCTTCCAAAGCATGAGCAT
CAGCGAAGTCTTCGGCGAGTTCCGATGCGGCAAGACTCAGTTATCGCACA
CCATGTCTGTTGTAGCCCAGCTTCCTAAGGAACTGGGCGGCGCAGGCGGC
AAGGTGGCATATATTGATACCGAGGGAACTTTCAGGCCTGAGCGCATCGC
TCAGATTGCAGAGCGGTTTGGCGTCGATGCTGATGCTGCCCAGGAGAATA
TTGCTTATGCGCGAGCGTTGAACAGCGAGCATCAGCTGGAGTTGTTGAAT
ACCCTCAGTAAAGAGTTCGCTGGTGGGGAATACAGGTTGTTGATCATTGA
TAGCATCATGAATTGCTTCAGGGTCGACTATTGTGGACGCGGAGAGCTTG
CTGATCGTCAGCAGAAGTTGAATCAGTTCTTGATGAAGTTGGCTCATATG
GCTGAGGCCCTCGGCTTCGGGTTTTATCACGGCAATGGAACTCTGCCATC
AACGGAAGAGGATTGTTAGGATTTCTACTGGGAGTAAACAATTCGATTCT
ATCTTAGGAGGTCTGTTCACGGTGCCACACGCAAGAACCTGTTGAAGATA
AAAGGGTTCAGCGAGGTCAAGGTCGAGAAAATCAAGGATGCTATTCAGAA
GAGCTTGGTCTTCATCCTTGATATCGATAACATTCAAGCCCATGGTATAT
ACTCGTCACTTCTCACTTCCTTTCACCTCCGTATACTAATAATGCCCGGC
TCAGACACAAGCGACGAGTTCAACGATGATACTGCCCTGAGAGAGAAGCG
ACGTATGTCATCACCAATGGTGGGATCAATGATCCTGATAAGGCGTAGAC
CAACCAGGTCCAGAGTGACCCTGGCGCTAGTGCACTCTTCGCTGGAGCCG
ATGGCCGCAAGCCCGTTGGAGGTCATGTCCTGGCACATGCATCGGCGACT
CGAGTGCTCCTCCGCAAGGGTCGTGGTGAAGAGCGAGTGGCTAAGATACA
GGACTCGCCAGAATTCAACATCTGTGTTCTGATGTGGCTTCCAAAGCATG
AGCATCAGCGAAGTCTTCGGCGAGTTCCGATGCGGCAAGACTCAGTTATC
GCACACCATGTCTGTTGTAGCCCAGCTTCCTAAGGAACTGGGCGGCGCAG
GCGGCAAGGTGGCATATATTGATACCGAGGGAACTTTCAGGCCTGAGCGC
ATCGCTCAGATTGCAGAGCGGTTTGGCGTCGATGCTGATGCTGCCCAGGA
GAATATTGCTTATGCGCGAGCGTTGAACAGCGAGCATCAGCTGGAGTTGT
TGAATACCCTCAGTAAAGAGTTCGCTGGTGGGGAATACAGGTTGTTGATC
ATTGATAGCATCATGAATTGCTTCAGGGTCGACTATTGTGGACGCGGAGA
GCTTGCTGATCGTCAGCAGAAGTTGAATCAGTTCTTGATGAAGTTGGCTC
ATATGGCTGAGGCCCTCGGCTTCGGGTTTTATCACGGCAATGGAACTCTG
CCATCAACGGAAGAGGATTGTTAGGATTTCTACTGGGAGTAAACAATTCG
ATTCTATCTTAGGAGGTCTGTTCACGGTGCCACACGCAAGAACCTGTTGA
AGATAAAAGGGTTCAGCGAGGTCAAGGTCGAGAAAATCAAGGATGCTATT
CAGAAGAGCTTGGTCTTCATCCTTGATATCGATAACATTCAAGCCCATGG
TATATACTCGTCACTTCTCACTTCCTTTCACCTCCGTATACTAATAATGC
CCGGCTCAGACACAAGCGACGAGTTCAACGATGATACTGCCCTGAGAGAG
AAGCGACGTATGTCATCACCAATGGTGGGATCAATGATCCTGATAAGGCG
TAGACCAACCAGGTCCAGAGTGACCCTGGCGCTAGTGCACTCTTCGCTGG
AGCCGATGGCCGCAAGCCCGTTGGAGGTCATGTCCTGGCACATGCATCGG
CGACTCGAGTGCTCCTCCGCAAGGGTCGTGGTGAAGAGCGAGTGGCTAAG
ATACAGGACTCGCCAGAATTCAACATCTGTGTTCTGATGTGGCTTCCAAA
GCATGAGCATCAGCGAAGTCTTCGGCGAGTTCCGATGCGGCAAGACTCAG
TTATCGCACACCATGTCTGTTGTAGCCCAGCTTCCTAAGGAACTGGGCGG
CGCAGGCGGCAAGGTGGCATATATTGATACCGAGGGAACTTTCAGGCCTG
AGCGCATCGCTCAGATTGCAGAGCGGTTTGGCGTCGATGCTGATGCTGCC
CAGGAGAATATTGCTTATGCGCGAGCGTTGAACAGCGAGCATCAGCTGGA
GTTGTTGAATACCCTCAGTAAAGAGTTCGCTGGTGGGGAATACAGGTTGT
TGATCATTGATAGCATCATGAATTGCTTCAGGGTCGACTATTGTGGACGC
GGAGAGCTTGCTGATCGTCAGCAGAAGTTGAATCAGTTCTTGATGAAGTT
GGCTCATATGGCTGAGGCCCTCGGCTTCGGGTTTTATCACGGCAATGGAA
CTCTGCCATCAACGGAAGAGGATTGTTAGGATTTCTACTGGGAGTAAACA
ATTCGATTCTATCTTAGGAGGTCTGTTCACGGTGCCACACGCAAGAACCT
GTTGAAGATAAAAGGGTTCAGCGAGGTCAAGGTCGAGAAAATCAAGGATG
CTATTCAGAAGAGCTTGGTCTTCATCCTTGATATCGATAACATTCAAGCC
CATGGTATATACTCGTCACTTCTCACTTCCTTTCACCTCCGTATACTAAT
AATGCCCGGCTCAGACACAAGCGACGAGTTCAACGATGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0006281 | DNA repair |
| GO:0006259 | DNA metabolic process |
| GO:0007131 | reciprocal meiotic recombination |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008094 | DNA-dependent ATPase activity |
| GO:0005524 | ATP binding |
| GO:0000150 | recombinase activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR033925 |
| DBxref | InterPro:IPR020588 |
| DBxref | InterPro:IPR020587 |
| DBxref | InterPro:IPR013632 |
| DBxref | InterPro:IPR011940 |
| DBxref | InterPro:IPR016467 |
| DBxref | InterPro:IPR003593 |
| DBxref | PFAM:PF00154 |
| DBxref | PFAM:PF08423 |
| DBxref | PFAM:PF06745 |
| Product | carboxymethylenebutenolidase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:112576..114095 - |
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