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CBS51388_007434-T1, CBS51388_007434-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007434-T1
Unique NameCBS51388_007434-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:115058..116125-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007434-T1 ID=CBS51388_007434-T1|Name=CBS51388_007434-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1068bp|location=Sequence derived from alignment at An12:115058..116125- (Aspergillus niger CBS 513.88)
ATGTTGTTGTCTCGTCGTGCCTGCTACAAGTGTGGCAACATTGGCCACTA
CGCTGGTTAGTAGTTGCTTTGGGAAGGAAACGCCTTGGCCCATCCTGGAA
TTTACTAACGGGCTGAGGTAGAGGTCTGCTCTTCCTCGGAGCGTCTCTGC
TACAACTGTGAGTAGACCCTGTTCATTGGCAGCTTATTCGTTGCGTATCA
TTTGCTGATATAATTACGCTGTTCAACAGGCAAGCAGCCTGGTAGGTCCC
TTCTGTGTGTCACGTCGCTCGAACAATATCTCTGATCGATCAATCGACAG
GCCATGAGTCCAGCAGCTGCCCGCGTCCTCGTACGACTGAGAGTAAGGTT
TTCGGTCCTCGTGGCTGCAACGCACCGGAATGCTGATATATCTCCGATCC
AGCCAAGCAATGCTACAACTGCCAGGGACTAGGCCACGTTCAGGCCGATT
GTCCTACGTTGCGCCTTAACGGTGCCAACGGCCGCTGCTACAACTGCAGC
CAGCCCGGTCACCTTGCCGTACGTTTTCTCGTCGATCCCAGCTTATTGCT
TTCCGGGCAAAATCGTTGTTGACCTTCTCCTAGCGCAACTGCCCCGCTCC
TGCTTCCGGTGCTCCCCGGGCCCCTGCTCCCCGCGGCGGATTCAACAGCG
GTTTCCGTGGTGGATACGGATACCCCCGTGCTGCTACTTGCTACAAGTGC
GGTGGCCCCAACCACTTTGCCCGTGATTGCCAGGCTCAGGCTATGAAGTG
CTACGCCTGTGGCAAGCTGGTAGGTGTTCTTGTCATACTTGATCCGATAC
GAACGTTGAGGCTTATCTGAATCTATAGGGTCACATCTCCCGCGAATGCA
CTGCCCCCAACGGCGGTCCCCTGAGCTCCGCCGGCAAGGTCTGCTACAAG
TGCTCCCAGGCCGGACACATCTCCCGCGACTGCCCCAGCAACGAGGCCGT
CGCTCAGCAGCCCGTTGATGCCACTGCTGCCCCTGCTGCCCCTGCCGCCG
CCGCTGCCGAGGTCAGCGCGGAGGCTGCTCCCGTTGCTGCTGCGGCTCCT
ACTACCGCTGTCGCATAG
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Coding sequence (CDS) from alignment at An12:115058..116125-

>CBS51388_007434-T1 ID=CBS51388_007434-T1|Name=CBS51388_007434-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2388bp|location=Sequence derived from alignment at An12:115058..116125- (Aspergillus niger CBS 513.88)
GGTCACATCTCCCGCGAATGCACTGCCCCCAACGGCGGTCCCCTGAGCTC
CGCCGGCAAGGTCTGCTACAAGTGCTCCCAGGCCGGACACATCTCCCGCG
ACTGCCCCAGCAACGAGGCCGTCGCTCAGCAGCCCGTTGATGCCACTGCT
GCCCCTGCTGCCCCTGCCGCCGCCGCTGCCGAGGTCAGCGCGGAGGCTGC
TCCCGTTGCTGCTGCGGCTCCTACTACCGCTGTCGCATAGCGCAACTGCC
CCGCTCCTGCTTCCGGTGCTCCCCGGGCCCCTGCTCCCCGCGGCGGATTC
AACAGCGGTTTCCGTGGTGGATACGGATACCCCCGTGCTGCTACTTGCTA
CAAGTGCGGTGGCCCCAACCACTTTGCCCGTGATTGCCAGGCTCAGGCTA
TGAAGTGCTACGCCTGTGGCAAGCTGCCAAGCAATGCTACAACTGCCAGG
GACTAGGCCACGTTCAGGCCGATTGTCCTACGTTGCGCCTTAACGGTGCC
AACGGCCGCTGCTACAACTGCAGCCAGCCCGGTCACCTTGCCATGTTGTT
GTCTCGTCGTGCCTGCTACAAGTGTGGCAACATTGGCCACTACGCTGGGT
CACATCTCCCGCGAATGCACTGCCCCCAACGGCGGTCCCCTGAGCTCCGC
CGGCAAGGTCTGCTACAAGTGCTCCCAGGCCGGACACATCTCCCGCGACT
GCCCCAGCAACGAGGCCGTCGCTCAGCAGCCCGTTGATGCCACTGCTGCC
CCTGCTGCCCCTGCCGCCGCCGCTGCCGAGGTCAGCGCGGAGGCTGCTCC
CGTTGCTGCTGCGGCTCCTACTACCGCTGTCGCATAGCGCAACTGCCCCG
CTCCTGCTTCCGGTGCTCCCCGGGCCCCTGCTCCCCGCGGCGGATTCAAC
AGCGGTTTCCGTGGTGGATACGGATACCCCCGTGCTGCTACTTGCTACAA
GTGCGGTGGCCCCAACCACTTTGCCCGTGATTGCCAGGCTCAGGCTATGA
AGTGCTACGCCTGTGGCAAGCTGCCAAGCAATGCTACAACTGCCAGGGAC
TAGGCCACGTTCAGGCCGATTGTCCTACGTTGCGCCTTAACGGTGCCAAC
GGCCGCTGCTACAACTGCAGCCAGCCCGGTCACCTTGCCATGTTGTTGTC
TCGTCGTGCCTGCTACAAGTGTGGCAACATTGGCCACTACGCTGGGTCAC
ATCTCCCGCGAATGCACTGCCCCCAACGGCGGTCCCCTGAGCTCCGCCGG
CAAGGTCTGCTACAAGTGCTCCCAGGCCGGACACATCTCCCGCGACTGCC
CCAGCAACGAGGCCGTCGCTCAGCAGCCCGTTGATGCCACTGCTGCCCCT
GCTGCCCCTGCCGCCGCCGCTGCCGAGGTCAGCGCGGAGGCTGCTCCCGT
TGCTGCTGCGGCTCCTACTACCGCTGTCGCATAGCGCAACTGCCCCGCTC
CTGCTTCCGGTGCTCCCCGGGCCCCTGCTCCCCGCGGCGGATTCAACAGC
GGTTTCCGTGGTGGATACGGATACCCCCGTGCTGCTACTTGCTACAAGTG
CGGTGGCCCCAACCACTTTGCCCGTGATTGCCAGGCTCAGGCTATGAAGT
GCTACGCCTGTGGCAAGCTGCCAAGCAATGCTACAACTGCCAGGGACTAG
GCCACGTTCAGGCCGATTGTCCTACGTTGCGCCTTAACGGTGCCAACGGC
CGCTGCTACAACTGCAGCCAGCCCGGTCACCTTGCCATGTTGTTGTCTCG
TCGTGCCTGCTACAAGTGTGGCAACATTGGCCACTACGCTGGGTCACATC
TCCCGCGAATGCACTGCCCCCAACGGCGGTCCCCTGAGCTCCGCCGGCAA
GGTCTGCTACAAGTGCTCCCAGGCCGGACACATCTCCCGCGACTGCCCCA
GCAACGAGGCCGTCGCTCAGCAGCCCGTTGATGCCACTGCTGCCCCTGCT
GCCCCTGCCGCCGCCGCTGCCGAGGTCAGCGCGGAGGCTGCTCCCGTTGC
TGCTGCGGCTCCTACTACCGCTGTCGCATAGCGCAACTGCCCCGCTCCTG
CTTCCGGTGCTCCCCGGGCCCCTGCTCCCCGCGGCGGATTCAACAGCGGT
TTCCGTGGTGGATACGGATACCCCCGTGCTGCTACTTGCTACAAGTGCGG
TGGCCCCAACCACTTTGCCCGTGATTGCCAGGCTCAGGCTATGAAGTGCT
ACGCCTGTGGCAAGCTGCCAAGCAATGCTACAACTGCCAGGGACTAGGCC
ACGTTCAGGCCGATTGTCCTACGTTGCGCCTTAACGGTGCCAACGGCCGC
TGCTACAACTGCAGCCAGCCCGGTCACCTTGCCATGTTGTTGTCTCGTCG
TGCCTGCTACAAGTGTGGCAACATTGGCCACTACGCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007434CBS51388_007434Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007434-T1CBS51388_007434-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007434-T1.cdsCBS51388_007434-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007434-T1.exon4CBS51388_007434-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007434-T1.exon3CBS51388_007434-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007434-T1.exon2CBS51388_007434-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007434-T1.exon1CBS51388_007434-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036875
DBxrefInterPro:IPR001878
DBxrefPFAM:PF13917
DBxrefPFAM:PF00098
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:115058..116125 -
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