|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:120078..121696- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007436-T1 ID=CBS51388_007436-T1|Name=CBS51388_007436-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1619bp|location=Sequence derived from alignment at An12:120078..121696- (Aspergillus niger CBS 513.88)
ATGAGTGTCCTGCTGGAAACTTCCCTCGGGGACATCGTTATCGACCTGCT
GGTCGATGAGTCCCCTAAAGCGTGCGAAAAGTGAGCAATCCCCTATTTCC
TCGTTTCCCTTCTTTCTGCTGTGTTTTTCTTGCGCGCGCGTACAAATCGA
GTAGCTGAACAGGAACTAAGCTGTCTGTGGTTTTCCGCTTTAGCTTTCTG
AAGCTATGCAAAGTTAAATATTACAATTTCTCGCCCGTCCACAGCGTCCA
AAAGAACTTCACCTTCCAGACTGGCGATCCGATTGGGCCCGACTCCTCAG
AAAGCGATGGTGGATCGTCGATATGGGGCTTGCTGCAGGGCCCTTCTCAG
CGGACATTTCCCCTCCAGCTCCCGCCCAAGTTGAAGCATGACGAACGAGG
CACTGTGAGCATGGCCACCGTACCTTCACCCAACGACCCTGATCTGCGCA
TTGCCGCCAGTCAGTTCATCATCACACTTGGAGACAACCTTGATTACTTG
GACGGCAAGGCGGTGATCTTCGGGAAAGTGGTGGAGGGGTTTGACGTCCT
GGAGAAAGTCAACGAGGCTTTCATTGATGATCGCGGCCGCCCGCTCAAAG
ATATACGTATCCGTCATACCGTCATCCTCGATGATCCTTTTGAAGACCCC
GAAGGCTTGGTAGAGCCACCGGAGAGCCCGGTGCCGTCCAAGGCACAGCT
GGCTACGGTAAGAATCGCCGATGATGAAGACTTGGATGACGACATAGACG
AGGAGTCAATGGAGAGGCTGCGACGGGAGCGCGAAGCAAGGGCACAGGCG
TTGACGCTGGAAATGGTTGGCGATCTTCCCTTCGCCGAGGTCAAGCCGCC
AGAGAACGTCTTGTTTGTCTGCAAGTTGAATCCCGTCACCCAAGGTATGC
ATTCCAAATTGCGCCGTGGTCACGTTCCGAACTCACACGCCCATTAGACG
AGGACCTCAACCTAATCTTCAGTCGCTTCGGACCCATTCTGTCTTGTGAG
GTCATCCGCGACAAGCGTACAGGTGACAGTCTACAATACGCTTTTATCGA
GTTCGAGAACCAGAAGGATTGCGAACAGGCATACTTCAAGATGCAGGGTG
TCTTGATTGATGACCACCGTATTCATGTTGATTTCTCCCAGAGTGTGAGT
CTGCCGTCCGCCCAATCTTCCCAACATGGGCTAACAATGATGACAAAAAT
AGGTATCTAAATTGTCCGAGAGCTGGCGCAATGCTACGATCACCAAGCGC
AGTAGCCAGCGGGGTGGCTTTGGTGGTGTCGCAGGCCTAGAAAAGAAGCG
CCAGTACCGGGCAACAGAGAATACTCGTCAACGAGACGATGATTATCACA
TGGTCTTCGATAAGAATGCGCCCCGAGCGAAATCTGGTCGGGACGAGCGG
TCTCTCAGTCGAAGCCCACCGCGGAAGCCACAACGGGAAAGACGAGTCAG
TCGGAGTCCCCGGCGGGACTCATATCGTAATCGGTACCGAGATCGATCCT
ACAGCCGGAGTCCACCACGGCGGGATTCTTACGGGGACCGAGACCGCAGA
TATAACGACAATGAGCGGCGACGGGATCGTCGTGACGATGATAGATACCG
GGAGAGGCGGCGTCGTTGA back to topCoding sequence (CDS) from alignment at An12:120078..121696- >CBS51388_007436-T1 ID=CBS51388_007436-T1|Name=CBS51388_007436-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5580bp|location=Sequence derived from alignment at An12:120078..121696- (Aspergillus niger CBS 513.88)
GTATCTAAATTGTCCGAGAGCTGGCGCAATGCTACGATCACCAAGCGCAG
TAGCCAGCGGGGTGGCTTTGGTGGTGTCGCAGGCCTAGAAAAGAAGCGCC
AGTACCGGGCAACAGAGAATACTCGTCAACGAGACGATGATTATCACATG
GTCTTCGATAAGAATGCGCCCCGAGCGAAATCTGGTCGGGACGAGCGGTC
TCTCAGTCGAAGCCCACCGCGGAAGCCACAACGGGAAAGACGAGTCAGTC
GGAGTCCCCGGCGGGACTCATATCGTAATCGGTACCGAGATCGATCCTAC
AGCCGGAGTCCACCACGGCGGGATTCTTACGGGGACCGAGACCGCAGATA
TAACGACAATGAGCGGCGACGGGATCGTCGTGACGATGATAGATACCGGG
AGAGGCGGCGTCGTTGAACGAGGACCTCAACCTAATCTTCAGTCGCTTCG
GACCCATTCTGTCTTGTGAGGTCATCCGCGACAAGCGTACAGGTGACAGT
CTACAATACGCTTTTATCGAGTTCGAGAACCAGAAGGATTGCGAACAGGC
ATACTTCAAGATGCAGGGTGTCTTGATTGATGACCACCGTATTCATGTTG
ATTTCTCCCAGAGTCTTTCTGAAGCTATGCAAAGTTAAATATTACAATTT
CTCGCCCGTCCACAGCGTCCAAAAGAACTTCACCTTCCAGACTGGCGATC
CGATTGGGCCCGACTCCTCAGAAAGCGATGGTGGATCGTCGATATGGGGC
TTGCTGCAGGGCCCTTCTCAGCGGACATTTCCCCTCCAGCTCCCGCCCAA
GTTGAAGCATGACGAACGAGGCACTGTGAGCATGGCCACCGTACCTTCAC
CCAACGACCCTGATCTGCGCATTGCCGCCAGTCAGTTCATCATCACACTT
GGAGACAACCTTGATTACTTGGACGGCAAGGCGGTGATCTTCGGGAAAGT
GGTGGAGGGGTTTGACGTCCTGGAGAAAGTCAACGAGGCTTTCATTGATG
ATCGCGGCCGCCCGCTCAAAGATATACGTATCCGTCATACCGTCATCCTC
GATGATCCTTTTGAAGACCCCGAAGGCTTGGTAGAGCCACCGGAGAGCCC
GGTGCCGTCCAAGGCACAGCTGGCTACGGTAAGAATCGCCGATGATGAAG
ACTTGGATGACGACATAGACGAGGAGTCAATGGAGAGGCTGCGACGGGAG
CGCGAAGCAAGGGCACAGGCGTTGACGCTGGAAATGGTTGGCGATCTTCC
CTTCGCCGAGGTCAAGCCGCCAGAGAACGTCTTGTTTGTCTGCAAGTTGA
ATCCCGTCACCCAAGATGAGTGTCCTGCTGGAAACTTCCCTCGGGGACAT
CGTTATCGACCTGCTGGTCGATGAGTCCCCTAAAGCGTGCGAAAAGTATC
TAAATTGTCCGAGAGCTGGCGCAATGCTACGATCACCAAGCGCAGTAGCC
AGCGGGGTGGCTTTGGTGGTGTCGCAGGCCTAGAAAAGAAGCGCCAGTAC
CGGGCAACAGAGAATACTCGTCAACGAGACGATGATTATCACATGGTCTT
CGATAAGAATGCGCCCCGAGCGAAATCTGGTCGGGACGAGCGGTCTCTCA
GTCGAAGCCCACCGCGGAAGCCACAACGGGAAAGACGAGTCAGTCGGAGT
CCCCGGCGGGACTCATATCGTAATCGGTACCGAGATCGATCCTACAGCCG
GAGTCCACCACGGCGGGATTCTTACGGGGACCGAGACCGCAGATATAACG
ACAATGAGCGGCGACGGGATCGTCGTGACGATGATAGATACCGGGAGAGG
CGGCGTCGTTGAACGAGGACCTCAACCTAATCTTCAGTCGCTTCGGACCC
ATTCTGTCTTGTGAGGTCATCCGCGACAAGCGTACAGGTGACAGTCTACA
ATACGCTTTTATCGAGTTCGAGAACCAGAAGGATTGCGAACAGGCATACT
TCAAGATGCAGGGTGTCTTGATTGATGACCACCGTATTCATGTTGATTTC
TCCCAGAGTCTTTCTGAAGCTATGCAAAGTTAAATATTACAATTTCTCGC
CCGTCCACAGCGTCCAAAAGAACTTCACCTTCCAGACTGGCGATCCGATT
GGGCCCGACTCCTCAGAAAGCGATGGTGGATCGTCGATATGGGGCTTGCT
GCAGGGCCCTTCTCAGCGGACATTTCCCCTCCAGCTCCCGCCCAAGTTGA
AGCATGACGAACGAGGCACTGTGAGCATGGCCACCGTACCTTCACCCAAC
GACCCTGATCTGCGCATTGCCGCCAGTCAGTTCATCATCACACTTGGAGA
CAACCTTGATTACTTGGACGGCAAGGCGGTGATCTTCGGGAAAGTGGTGG
AGGGGTTTGACGTCCTGGAGAAAGTCAACGAGGCTTTCATTGATGATCGC
GGCCGCCCGCTCAAAGATATACGTATCCGTCATACCGTCATCCTCGATGA
TCCTTTTGAAGACCCCGAAGGCTTGGTAGAGCCACCGGAGAGCCCGGTGC
CGTCCAAGGCACAGCTGGCTACGGTAAGAATCGCCGATGATGAAGACTTG
GATGACGACATAGACGAGGAGTCAATGGAGAGGCTGCGACGGGAGCGCGA
AGCAAGGGCACAGGCGTTGACGCTGGAAATGGTTGGCGATCTTCCCTTCG
CCGAGGTCAAGCCGCCAGAGAACGTCTTGTTTGTCTGCAAGTTGAATCCC
GTCACCCAAGATGAGTGTCCTGCTGGAAACTTCCCTCGGGGACATCGTTA
TCGACCTGCTGGTCGATGAGTCCCCTAAAGCGTGCGAAAAGTATCTAAAT
TGTCCGAGAGCTGGCGCAATGCTACGATCACCAAGCGCAGTAGCCAGCGG
GGTGGCTTTGGTGGTGTCGCAGGCCTAGAAAAGAAGCGCCAGTACCGGGC
AACAGAGAATACTCGTCAACGAGACGATGATTATCACATGGTCTTCGATA
AGAATGCGCCCCGAGCGAAATCTGGTCGGGACGAGCGGTCTCTCAGTCGA
AGCCCACCGCGGAAGCCACAACGGGAAAGACGAGTCAGTCGGAGTCCCCG
GCGGGACTCATATCGTAATCGGTACCGAGATCGATCCTACAGCCGGAGTC
CACCACGGCGGGATTCTTACGGGGACCGAGACCGCAGATATAACGACAAT
GAGCGGCGACGGGATCGTCGTGACGATGATAGATACCGGGAGAGGCGGCG
TCGTTGAACGAGGACCTCAACCTAATCTTCAGTCGCTTCGGACCCATTCT
GTCTTGTGAGGTCATCCGCGACAAGCGTACAGGTGACAGTCTACAATACG
CTTTTATCGAGTTCGAGAACCAGAAGGATTGCGAACAGGCATACTTCAAG
ATGCAGGGTGTCTTGATTGATGACCACCGTATTCATGTTGATTTCTCCCA
GAGTCTTTCTGAAGCTATGCAAAGTTAAATATTACAATTTCTCGCCCGTC
CACAGCGTCCAAAAGAACTTCACCTTCCAGACTGGCGATCCGATTGGGCC
CGACTCCTCAGAAAGCGATGGTGGATCGTCGATATGGGGCTTGCTGCAGG
GCCCTTCTCAGCGGACATTTCCCCTCCAGCTCCCGCCCAAGTTGAAGCAT
GACGAACGAGGCACTGTGAGCATGGCCACCGTACCTTCACCCAACGACCC
TGATCTGCGCATTGCCGCCAGTCAGTTCATCATCACACTTGGAGACAACC
TTGATTACTTGGACGGCAAGGCGGTGATCTTCGGGAAAGTGGTGGAGGGG
TTTGACGTCCTGGAGAAAGTCAACGAGGCTTTCATTGATGATCGCGGCCG
CCCGCTCAAAGATATACGTATCCGTCATACCGTCATCCTCGATGATCCTT
TTGAAGACCCCGAAGGCTTGGTAGAGCCACCGGAGAGCCCGGTGCCGTCC
AAGGCACAGCTGGCTACGGTAAGAATCGCCGATGATGAAGACTTGGATGA
CGACATAGACGAGGAGTCAATGGAGAGGCTGCGACGGGAGCGCGAAGCAA
GGGCACAGGCGTTGACGCTGGAAATGGTTGGCGATCTTCCCTTCGCCGAG
GTCAAGCCGCCAGAGAACGTCTTGTTTGTCTGCAAGTTGAATCCCGTCAC
CCAAGATGAGTGTCCTGCTGGAAACTTCCCTCGGGGACATCGTTATCGAC
CTGCTGGTCGATGAGTCCCCTAAAGCGTGCGAAAAGTATCTAAATTGTCC
GAGAGCTGGCGCAATGCTACGATCACCAAGCGCAGTAGCCAGCGGGGTGG
CTTTGGTGGTGTCGCAGGCCTAGAAAAGAAGCGCCAGTACCGGGCAACAG
AGAATACTCGTCAACGAGACGATGATTATCACATGGTCTTCGATAAGAAT
GCGCCCCGAGCGAAATCTGGTCGGGACGAGCGGTCTCTCAGTCGAAGCCC
ACCGCGGAAGCCACAACGGGAAAGACGAGTCAGTCGGAGTCCCCGGCGGG
ACTCATATCGTAATCGGTACCGAGATCGATCCTACAGCCGGAGTCCACCA
CGGCGGGATTCTTACGGGGACCGAGACCGCAGATATAACGACAATGAGCG
GCGACGGGATCGTCGTGACGATGATAGATACCGGGAGAGGCGGCGTCGTT
GAACGAGGACCTCAACCTAATCTTCAGTCGCTTCGGACCCATTCTGTCTT
GTGAGGTCATCCGCGACAAGCGTACAGGTGACAGTCTACAATACGCTTTT
ATCGAGTTCGAGAACCAGAAGGATTGCGAACAGGCATACTTCAAGATGCA
GGGTGTCTTGATTGATGACCACCGTATTCATGTTGATTTCTCCCAGAGTC
TTTCTGAAGCTATGCAAAGTTAAATATTACAATTTCTCGCCCGTCCACAG
CGTCCAAAAGAACTTCACCTTCCAGACTGGCGATCCGATTGGGCCCGACT
CCTCAGAAAGCGATGGTGGATCGTCGATATGGGGCTTGCTGCAGGGCCCT
TCTCAGCGGACATTTCCCCTCCAGCTCCCGCCCAAGTTGAAGCATGACGA
ACGAGGCACTGTGAGCATGGCCACCGTACCTTCACCCAACGACCCTGATC
TGCGCATTGCCGCCAGTCAGTTCATCATCACACTTGGAGACAACCTTGAT
TACTTGGACGGCAAGGCGGTGATCTTCGGGAAAGTGGTGGAGGGGTTTGA
CGTCCTGGAGAAAGTCAACGAGGCTTTCATTGATGATCGCGGCCGCCCGC
TCAAAGATATACGTATCCGTCATACCGTCATCCTCGATGATCCTTTTGAA
GACCCCGAAGGCTTGGTAGAGCCACCGGAGAGCCCGGTGCCGTCCAAGGC
ACAGCTGGCTACGGTAAGAATCGCCGATGATGAAGACTTGGATGACGACA
TAGACGAGGAGTCAATGGAGAGGCTGCGACGGGAGCGCGAAGCAAGGGCA
CAGGCGTTGACGCTGGAAATGGTTGGCGATCTTCCCTTCGCCGAGGTCAA
GCCGCCAGAGAACGTCTTGTTTGTCTGCAAGTTGAATCCCGTCACCCAAG
ATGAGTGTCCTGCTGGAAACTTCCCTCGGGGACATCGTTATCGACCTGCT
GGTCGATGAGTCCCCTAAAGCGTGCGAAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000413 | protein peptidyl-prolyl isomerization |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR035538 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR029000 |
| DBxref | InterPro:IPR000504 |
| DBxref | InterPro:IPR002130 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF00160 |
| Product | Peptidyl-prolyl cis-trans isomerase cyp6 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:120078..121696 - |
|
