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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:141115..141977- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007442-T1 ID=CBS51388_007442-T1|Name=CBS51388_007442-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=863bp|location=Sequence derived from alignment at An12:141115..141977- (Aspergillus niger CBS 513.88)
ATGCCGGCCGCCAGCTCTGCCAGCTCCACCGCAAACGGTCGCTCCAGCCG
ATCTGGACCTTCCAAAAGGATCGTTGTCCTCAAGCTGTCTACCGATCTGC
TGAGCCAGTTCGTGACACCACCGCCCGAGGGAAAGGACAAGAAGAGCAAA
CGGGGTAGCGTCAGCAATGCCGACTCGCCCGTCAAGATCCAGGAGCCTTC
GTCCCCGGCTTCCTCGTCCGCCGAACTACCTCTCCCTCCCTCGTCCGTGG
ACAATGCCTCCGATGCTGCGTCCACGCCCGCCGCAGGCACCTCGGCTGCA
GACACACCTCGTCGCAAGGGCGTTCCGGGCCCTAAGCCGGGCACCAAACG
AGGCCTCAACCAGACCGGCGAAACCACCCCGAAGCCGAGAGGCAAGCCAG
GTCCCAAGAAGAAGCCCCGACTGTATGTTCCTCCATCCCGACCAATTGAC
CATGGGTGCATTTGCTAACTGCTTCTAGTGATGACGGCACCGTCGACACT
GCCAAGTTGGTGGCAGCTCACAAGCTCGGTCCGAAGGCCAACTTGGGTGC
AATCAATGCCGGTCTACGTGCTCTGGATCGCACCGGGTCCCCATGCCGTC
GCTGGGAGCGTAAGCCTCTTCAGCTGAAGAGTTTCACCGGCATCCAATGG
ATGCTGCCGTCTTGGCGTACTCCTCGCCCGTTGAAGTCCGAGGAGAACGA
CGAGGGTCAGAGCATGGCTCTCGAGACTGGCGACAGCGACAGCAAGGCCA
ACCAGAGTGCCAGTGGCGTCCCCAGCGAGAAGAGCACTGGCGACGGTGAA
CTCACTCCCGCTCCGCCTAACCTGACGGAAGCGTCTTCTCCCGCCATCGC
CATGACTGCTTGA back to topCoding sequence (CDS) from alignment at An12:141115..141977- >CBS51388_007442-T1 ID=CBS51388_007442-T1|Name=CBS51388_007442-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1614bp|location=Sequence derived from alignment at An12:141115..141977- (Aspergillus niger CBS 513.88)
TGATGACGGCACCGTCGACACTGCCAAGTTGGTGGCAGCTCACAAGCTCG
GTCCGAAGGCCAACTTGGGTGCAATCAATGCCGGTCTACGTGCTCTGGAT
CGCACCGGGTCCCCATGCCGTCGCTGGGAGCGTAAGCCTCTTCAGCTGAA
GAGTTTCACCGGCATCCAATGGATGCTGCCGTCTTGGCGTACTCCTCGCC
CGTTGAAGTCCGAGGAGAACGACGAGGGTCAGAGCATGGCTCTCGAGACT
GGCGACAGCGACAGCAAGGCCAACCAGAGTGCCAGTGGCGTCCCCAGCGA
GAAGAGCACTGGCGACGGTGAACTCACTCCCGCTCCGCCTAACCTGACGG
AAGCGTCTTCTCCCGCCATCGCCATGACTGCTTGAATGCCGGCCGCCAGC
TCTGCCAGCTCCACCGCAAACGGTCGCTCCAGCCGATCTGGACCTTCCAA
AAGGATCGTTGTCCTCAAGCTGTCTACCGATCTGCTGAGCCAGTTCGTGA
CACCACCGCCCGAGGGAAAGGACAAGAAGAGCAAACGGGGTAGCGTCAGC
AATGCCGACTCGCCCGTCAAGATCCAGGAGCCTTCGTCCCCGGCTTCCTC
GTCCGCCGAACTACCTCTCCCTCCCTCGTCCGTGGACAATGCCTCCGATG
CTGCGTCCACGCCCGCCGCAGGCACCTCGGCTGCAGACACACCTCGTCGC
AAGGGCGTTCCGGGCCCTAAGCCGGGCACCAAACGAGGCCTCAACCAGAC
CGGCGAAACCACCCCGAAGCCGAGAGGCAAGCCAGGTCCCAAGAAGAAGC
CCCGACTTGATGACGGCACCGTCGACACTGCCAAGTTGGTGGCAGCTCAC
AAGCTCGGTCCGAAGGCCAACTTGGGTGCAATCAATGCCGGTCTACGTGC
TCTGGATCGCACCGGGTCCCCATGCCGTCGCTGGGAGCGTAAGCCTCTTC
AGCTGAAGAGTTTCACCGGCATCCAATGGATGCTGCCGTCTTGGCGTACT
CCTCGCCCGTTGAAGTCCGAGGAGAACGACGAGGGTCAGAGCATGGCTCT
CGAGACTGGCGACAGCGACAGCAAGGCCAACCAGAGTGCCAGTGGCGTCC
CCAGCGAGAAGAGCACTGGCGACGGTGAACTCACTCCCGCTCCGCCTAAC
CTGACGGAAGCGTCTTCTCCCGCCATCGCCATGACTGCTTGAATGCCGGC
CGCCAGCTCTGCCAGCTCCACCGCAAACGGTCGCTCCAGCCGATCTGGAC
CTTCCAAAAGGATCGTTGTCCTCAAGCTGTCTACCGATCTGCTGAGCCAG
TTCGTGACACCACCGCCCGAGGGAAAGGACAAGAAGAGCAAACGGGGTAG
CGTCAGCAATGCCGACTCGCCCGTCAAGATCCAGGAGCCTTCGTCCCCGG
CTTCCTCGTCCGCCGAACTACCTCTCCCTCCCTCGTCCGTGGACAATGCC
TCCGATGCTGCGTCCACGCCCGCCGCAGGCACCTCGGCTGCAGACACACC
TCGTCGCAAGGGCGTTCCGGGCCCTAAGCCGGGCACCAAACGAGGCCTCA
ACCAGACCGGCGAAACCACCCCGAAGCCGAGAGGCAAGCCAGGTCCCAAG
AAGAAGCCCCGACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0031011 | Ino80 complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006338 | chromatin remodeling |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013175 |
| DBxref | PFAM:PF08193 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:141115..141977 - |
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