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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:190738..193075+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007461-T1 ID=CBS51388_007461-T1|Name=CBS51388_007461-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2338bp|location=Sequence derived from alignment at An12:190738..193075+ (Aspergillus niger CBS 513.88)
ATGGTCTCGACTGTGCGTGATCTCATCGACCCTGACTTTGACCCTCTTAT
TGCTCTCCTCGACGATGAGCCGCGCTTTCTGAAGCCTCTCCCTTCTCGCA
TCCCACCGGAAGACCTAGAGTTTCTGCGATTCCGGGGGGCTTTGTCGATC
CCAGAGAGTGGTCTGCGGAATGAGCTACTGCGATGCTATATCAAATGGGT
GCATAGCTTTATGCCGGTGTTGAACCTACAGGAATTTCTCCGATGCGTTG
CGGAAAATGACCCCAATGGTAACATTAGTCTCCTGCTGTTTCAAGCAGTG
ATGTTCGTGGCGACAGCCTTCATCGATCTGCATCATTTACAGGCCGCTGG
GTATGCTACTCGGAAAATTGCCCGTAACGTGTTTTTTACGCGGTTAAGGG
TATGTCTCGCTTGATAATTCATCCGTGTACTTAGCTAACCAGTCAATATA
GCTCCTCTACTCACTTGACTGCGAAGATGATCGAATAGTTATACTGCAGA
CTCTACTACTTATGACTTATTGGTCTGATCATCAAAATAATCCGCAAAGA
GATATCTGGGACTGGATTGGTGTCTGCAATATACATGCACATTCGATCGG
GTTAAACAGAGACCCTTCGTCGTCGACCAACATGGATCCAAGGATTAAGA
GGCTGAGGACCCGAATATGGTGGAGCTTATACTCGCGAGACCGTCTTATT
GCGATGGGGCTAAGACGCCCGACGCAGGTAAACGAAGGGACAAGCAATGT
CCCCATGTTGAAGCTGGAAGACTTTGACTTCGAGTCGTTCCACCCTAGCG
TGATTGAGATGTTTCGTTGTCGTCAGCTGGAGGATGTTACTCACCAAAAA
CGCCTGGCGACTATGTTTATCGAAAAGGCCAAATTATGCCAGTGCATCGG
ACGGGTTTTGTTCGCCCAGTATACGCCATCACAATGTCAGTTCGGTGTGA
CGACACGAACTACCATTAGCCTAGTCCCTCGGCAGGCATCGGAATCCGAA
TTGGCCCGGTGCAGCCAGCGGTTAGAGTCCTGGCTGAGCGCACTACCCAA
AGACGCCCAATTCATTCCTGCGTCAAGAACAAACTTCCATGACGGAGAAG
ACGTCCTTCTGCTCCACGGTGCCATGGTACGAATGCTGTATCATGCTACC
ACAAGCGCACTGCATCGTCCCTGGGCCTTCACGCCCAACAAGGATCAGTC
AAAATCACGCAGGGAGTTGATTCAAGCTGCGCAAACGAAGATGCATGACG
CCGCCGTTGGTATCACCCATATCATCCAAGGTCTCAATCAGCTCAACCTC
ACGCGATTTCTCCCACAATCCGGTGTAACGGTTATCATCCCAGCCGCTGT
GGCCCATCTGACAAACTCCTCATCTGGCAATCCCGCCACCCGAGAATCCA
GCATCTACAACTTTCAACGCTGCATACAAGTGCTTCAGGGCCTTAGAGAC
ATCTATCCTGCAGCAGACATGGAGGTCGCGAACATCGAAGCGGCAGTTAA
GCTACAGTCCGATAGTGCAAACACCTTCCTCCGAATCATGCAATACACCA
ACAACTCCGGTTCTATGTCGCAGGGCCAATCACAAGAACACGCACGAAAA
CAAAGCACCATCTCAAACCCACACACCATAGCATCAGCAGAAGACCGAAC
CTCCAACCACTGGACCCCTCCCCAAGACGAGCCCGACCCAACCAACAACC
ACAAGCAATCCGAACCTCAACATTCAGCTGGTCCAACTAAGCAACAACAA
CAACAACAACAACAACGCACACCAACCAAAAGACACTCCAGCACAATTAA
CCCACCCCCCATCTTCAACACCACCAGCACCACCAACAACACAAACAATC
TCACCAACCCCCTCCCCAAACAAGCCGAACCCACCCCACCCAACGACTTC
GACGACGACCCCATATCCAACTTTCTGAACGACAACAACCCCACCATCTC
CCCCCGAAACACCCAAACACAACCCAATCCCACCTTCGACCAAGGCTCCG
ACCAGTTCCCCTTTGACTTTGACCTCGACCTCGACTCCTTTGCCGCCGAC
TTCCCGCCCCAAAACCCACCATCCACCAACCCCAACCCCGCCTCTACTTC
CAACCCCGACGCCTCCCCAGACCTCGACATAGATTGGGCTAGTGAGCTGC
TTAGATGGACCGGACCGGGTCCGGAGGATGCATTGACCAATAATAATGAT
CTGTTCTCGCCGTTTGCTCCGACTCCTAATGTTGAGAGTACCCCGGGGCA
GAGGTCCATGAGTCATGTGACTGGAGATATTACAGGGGATTTAGATAGAG
ATTTGGGGTTTGTTCCTTCTGACGAGGAGATTTTTTAG back to topCoding sequence (CDS) from alignment at An12:190738..193075+ >CBS51388_007461-T1 ID=CBS51388_007461-T1|Name=CBS51388_007461-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4572bp|location=Sequence derived from alignment at An12:190738..193075+ (Aspergillus niger CBS 513.88)
ATGGTCTCGACTGTGCGTGATCTCATCGACCCTGACTTTGACCCTCTTAT
TGCTCTCCTCGACGATGAGCCGCGCTTTCTGAAGCCTCTCCCTTCTCGCA
TCCCACCGGAAGACCTAGAGTTTCTGCGATTCCGGGGGGCTTTGTCGATC
CCAGAGAGTGGTCTGCGGAATGAGCTACTGCGATGCTATATCAAATGGGT
GCATAGCTTTATGCCGGTGTTGAACCTACAGGAATTTCTCCGATGCGTTG
CGGAAAATGACCCCAATGGTAACATTAGTCTCCTGCTGTTTCAAGCAGTG
ATGTTCGTGGCGACAGCCTTCATCGATCTGCATCATTTACAGGCCGCTGG
GTATGCTACTCGGAAAATTGCCCGTAACGTGTTTTTTACGCGGTTAAGGC
TCCTCTACTCACTTGACTGCGAAGATGATCGAATAGTTATACTGCAGACT
CTACTACTTATGACTTATTGGTCTGATCATCAAAATAATCCGCAAAGAGA
TATCTGGGACTGGATTGGTGTCTGCAATATACATGCACATTCGATCGGGT
TAAACAGAGACCCTTCGTCGTCGACCAACATGGATCCAAGGATTAAGAGG
CTGAGGACCCGAATATGGTGGAGCTTATACTCGCGAGACCGTCTTATTGC
GATGGGGCTAAGACGCCCGACGCAGGTAAACGAAGGGACAAGCAATGTCC
CCATGTTGAAGCTGGAAGACTTTGACTTCGAGTCGTTCCACCCTAGCGTG
ATTGAGATGTTTCGTTGTCGTCAGCTGGAGGATGTTACTCACCAAAAACG
CCTGGCGACTATGTTTATCGAAAAGGCCAAATTATGCCAGTGCATCGGAC
GGGTTTTGTTCGCCCAGTATACGCCATCACAATGTCAGTTCGGTGTGACG
ACACGAACTACCATTAGCCTAGTCCCTCGGCAGGCATCGGAATCCGAATT
GGCCCGGTGCAGCCAGCGGTTAGAGTCCTGGCTGAGCGCACTACCCAAAG
ACGCCCAATTCATTCCTGCGTCAAGAACAAACTTCCATGACGGAGAAGAC
GTCCTTCTGCTCCACGGTGCCATGGTACGAATGCTGTATCATGCTACCAC
AAGCGCACTGCATCGTCCCTGGGCCTTCACGCCCAACAAGGATCAGTCAA
AATCACGCAGGGAGTTGATTCAAGCTGCGCAAACGAAGATGCATGACGCC
GCCGTTGGTATCACCCATATCATCCAAGGTCTCAATCAGCTCAACCTCAC
GCGATTTCTCCCACAATCCGGTGTAACGGTTATCATCCCAGCCGCTGTGG
CCCATCTGACAAACTCCTCATCTGGCAATCCCGCCACCCGAGAATCCAGC
ATCTACAACTTTCAACGCTGCATACAAGTGCTTCAGGGCCTTAGAGACAT
CTATCCTGCAGCAGACATGGAGGTCGCGAACATCGAAGCGGCAGTTAAGC
TACAGTCCGATAGTGCAAACACCTTCCTCCGAATCATGCAATACACCAAC
AACTCCGGTTCTATGTCGCAGGGCCAATCACAAGAACACGCACGAAAACA
AAGCACCATCTCAAACCCACACACCATAGCATCAGCAGAAGACCGAACCT
CCAACCACTGGACCCCTCCCCAAGACGAGCCCGACCCAACCAACAACCAC
AAGCAATCCGAACCTCAACATTCAGCTGGTCCAACTAAGCAACAACAACA
ACAACAACAACAACGCACACCAACCAAAAGACACTCCAGCACAATTAACC
CACCCCCCATCTTCAACACCACCAGCACCACCAACAACACAAACAATCTC
ACCAACCCCCTCCCCAAACAAGCCGAACCCACCCCACCCAACGACTTCGA
CGACGACCCCATATCCAACTTTCTGAACGACAACAACCCCACCATCTCCC
CCCGAAACACCCAAACACAACCCAATCCCACCTTCGACCAAGGCTCCGAC
CAGTTCCCCTTTGACTTTGACCTCGACCTCGACTCCTTTGCCGCCGACTT
CCCGCCCCAAAACCCACCATCCACCAACCCCAACCCCGCCTCTACTTCCA
ACCCCGACGCCTCCCCAGACCTCGACATAGATTGGGCTAGTGAGCTGCTT
AGATGGACCGGACCGGGTCCGGAGGATGCATTGACCAATAATAATGATCT
GTTCTCGCCGTTTGCTCCGACTCCTAATGTTGAGAGTACCCCGGGGCAGA
GGTCCATGAGTCATGTGACTGGAGATATTACAGGGGATTTAGATAGAGAT
TTGGGGTTTGTTCCTTCTGACGAGGAGATTTTTTAGATGGTCTCGACTGT
GCGTGATCTCATCGACCCTGACTTTGACCCTCTTATTGCTCTCCTCGACG
ATGAGCCGCGCTTTCTGAAGCCTCTCCCTTCTCGCATCCCACCGGAAGAC
CTAGAGTTTCTGCGATTCCGGGGGGCTTTGTCGATCCCAGAGAGTGGTCT
GCGGAATGAGCTACTGCGATGCTATATCAAATGGGTGCATAGCTTTATGC
CGGTGTTGAACCTACAGGAATTTCTCCGATGCGTTGCGGAAAATGACCCC
AATGGTAACATTAGTCTCCTGCTGTTTCAAGCAGTGATGTTCGTGGCGAC
AGCCTTCATCGATCTGCATCATTTACAGGCCGCTGGGTATGCTACTCGGA
AAATTGCCCGTAACGTGTTTTTTACGCGGTTAAGGCTCCTCTACTCACTT
GACTGCGAAGATGATCGAATAGTTATACTGCAGACTCTACTACTTATGAC
TTATTGGTCTGATCATCAAAATAATCCGCAAAGAGATATCTGGGACTGGA
TTGGTGTCTGCAATATACATGCACATTCGATCGGGTTAAACAGAGACCCT
TCGTCGTCGACCAACATGGATCCAAGGATTAAGAGGCTGAGGACCCGAAT
ATGGTGGAGCTTATACTCGCGAGACCGTCTTATTGCGATGGGGCTAAGAC
GCCCGACGCAGGTAAACGAAGGGACAAGCAATGTCCCCATGTTGAAGCTG
GAAGACTTTGACTTCGAGTCGTTCCACCCTAGCGTGATTGAGATGTTTCG
TTGTCGTCAGCTGGAGGATGTTACTCACCAAAAACGCCTGGCGACTATGT
TTATCGAAAAGGCCAAATTATGCCAGTGCATCGGACGGGTTTTGTTCGCC
CAGTATACGCCATCACAATGTCAGTTCGGTGTGACGACACGAACTACCAT
TAGCCTAGTCCCTCGGCAGGCATCGGAATCCGAATTGGCCCGGTGCAGCC
AGCGGTTAGAGTCCTGGCTGAGCGCACTACCCAAAGACGCCCAATTCATT
CCTGCGTCAAGAACAAACTTCCATGACGGAGAAGACGTCCTTCTGCTCCA
CGGTGCCATGGTACGAATGCTGTATCATGCTACCACAAGCGCACTGCATC
GTCCCTGGGCCTTCACGCCCAACAAGGATCAGTCAAAATCACGCAGGGAG
TTGATTCAAGCTGCGCAAACGAAGATGCATGACGCCGCCGTTGGTATCAC
CCATATCATCCAAGGTCTCAATCAGCTCAACCTCACGCGATTTCTCCCAC
AATCCGGTGTAACGGTTATCATCCCAGCCGCTGTGGCCCATCTGACAAAC
TCCTCATCTGGCAATCCCGCCACCCGAGAATCCAGCATCTACAACTTTCA
ACGCTGCATACAAGTGCTTCAGGGCCTTAGAGACATCTATCCTGCAGCAG
ACATGGAGGTCGCGAACATCGAAGCGGCAGTTAAGCTACAGTCCGATAGT
GCAAACACCTTCCTCCGAATCATGCAATACACCAACAACTCCGGTTCTAT
GTCGCAGGGCCAATCACAAGAACACGCACGAAAACAAAGCACCATCTCAA
ACCCACACACCATAGCATCAGCAGAAGACCGAACCTCCAACCACTGGACC
CCTCCCCAAGACGAGCCCGACCCAACCAACAACCACAAGCAATCCGAACC
TCAACATTCAGCTGGTCCAACTAAGCAACAACAACAACAACAACAACAAC
GCACACCAACCAAAAGACACTCCAGCACAATTAACCCACCCCCCATCTTC
AACACCACCAGCACCACCAACAACACAAACAATCTCACCAACCCCCTCCC
CAAACAAGCCGAACCCACCCCACCCAACGACTTCGACGACGACCCCATAT
CCAACTTTCTGAACGACAACAACCCCACCATCTCCCCCCGAAACACCCAA
ACACAACCCAATCCCACCTTCGACCAAGGCTCCGACCAGTTCCCCTTTGA
CTTTGACCTCGACCTCGACTCCTTTGCCGCCGACTTCCCGCCCCAAAACC
CACCATCCACCAACCCCAACCCCGCCTCTACTTCCAACCCCGACGCCTCC
CCAGACCTCGACATAGATTGGGCTAGTGAGCTGCTTAGATGGACCGGACC
GGGTCCGGAGGATGCATTGACCAATAATAATGATCTGTTCTCGCCGTTTG
CTCCGACTCCTAATGTTGAGAGTACCCCGGGGCAGAGGTCCATGAGTCAT
GTGACTGGAGATATTACAGGGGATTTAGATAGAGATTTGGGGTTTGTTCC
TTCTGACGAGGAGATTTTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:190738..193075 + |
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