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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:220980..223631+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007468-T1 ID=CBS51388_007468-T1|Name=CBS51388_007468-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2652bp|location=Sequence derived from alignment at An12:220980..223631+ (Aspergillus niger CBS 513.88)
ATGGAAGACGCGTCTGGATCCTATCCCTTTGGCGTCGCAACTGCCGACGG
AACTCCCCTCCAAATCGATGCCGAGAATGCTGCCGTGAGGGGCATCAACG
AGTGGTCTTGGGGTTCGATGAGTCCGGGGATACCCCCTGCGGCCTTTCGT
CCCTATTCCTTGCCCCAGTTCATGGACCGACCGGGTCCCTACCCCTATCA
ATCCTCATCGTCGTCATCCCGTGAGCTCTCGGGCTCAGCTGCCAAAGTCG
CCATTCCCCGCACGACCAGCGCCAGTAGCCAGTCGCAACGCCGGCGCTCG
GCGAGAGCCTGCGAGCCATGTCGACAGCGGAAGATCAAGTGTGATGGAAG
CAAGCCAGTGTGTCGACAGTGCATTGATCACAATGTCAGCTGCTTCTTCG
TGGATGTAAAGCGTGTCCGCGATCAGAAACAACTTGGACTCCTAGGCAAG
AAGGTTGAACAATATGAGCGCCTATTACAAGAGCTGGAGAAGGAAGTCGA
TGAGAATGCGGCCAGACGCATCCGAAAAGTCCTTAGGGTAAGTCTCTGCG
TCTAGCTTTTGGTCTGCTGCTTTATAAGCCTCCTTGATCTTGACGTGGAT
CATTCCATTAGGCAATAGATACATATATCTAACTGCAATGGCTGATCTGA
AAGGGCACCGATATATCATCTCCTACCGACGATGGCGGCGACTCCGATTC
TTCGATTTCGTCCATCGGTTCGCTGGAGGCACTCGACTTAGTTGAGGAAG
ACTTGAATCGCAGCGAGAAAACGGTGGCTACGGGCTTCTTTGGGAAGAAT
TCGGAAGTCGCTTGGATGCAGAAACTTGAAGATGAAGCTAAAAGTCGAAA
TCGGAAGAAGGAAGATTCTACCGATATGGAGGACGGGGTGGCTGGCGGGC
ACACAATGACGCCGCCGCAGAAGCAGGAAACAGCGATGGCGGCAATGAGC
TATTACTTGGATGACATCGGTATTCCATTGATGGACTCTGTTGATCCATA
CGCACTTCCCCCAAAGGATTTGGCCAACCGGTTTTTCACTGCGTTTATGG
ACTCGGTCCATCCGTCATTCAATGTCGTCCGCAAGACGGCCTTTGTGTCC
CAGTATCGACAGTTCTTCAGCCAGCCAGCCCAGCCCCCACAGCGTTGGCT
AGCCATCTTGAACATGATCTTTGCAATTGGATGTCGATATACCCAAGCTA
CGAGTGGCCGTCCAGACAGCGGGGATTACAATGATCTGGTGTACTTGAAC
CGGGCGCGCAAATTGACTCTCAGCGAGAACGTCATCTTTGAGCATGCGGA
TCTTCAGCAAATCCAGGTCGAATTTCTGGTAGCACTTTACTTTGTCAGCA
AGTGTCAAATAAACAGGTGAGTCTGGCTCCGGGAGAGCTTGTTCTAATCG
CTTGCTAAACCTCTTCTACTGCAGGGCATTCAAGTTCTCCAGTATGGCCT
TCCGATCGGCCGTGTCCCTGGGAATCAACCTACGCTTCGTAGACGATCGT
ACGCAGTATCCTGCCAAAGAGGCTCGCATTCGGCTGTGGTGGTCAATATT
CCTCCTGGAACATCTTCTCACTGCGATCACCGGCCGGGTCTCTTGCGTGG
GCGAAAGCCTGAGCGCCACACCACTACCGATTCCGTACGAAGAGGAAGCG
TTCGGCAGACCAGACGTCCTTCCTCTTCTCCAAGACTCCTCCCTGCGCAT
GACCCGTCTGAAGCTAACTCTCCTGCAGTCGGATGAGGAATCACGCGCCG
ATGTAAGCTGGCTTCCGTCCTGCGAACCCAGCCCATCGCTATACTTCCAC
TGTATCGTGGATTTAGCCACCATTACCCAGGCGATCATCAACAAAGTCTA
CAGTATCCAAGGCCTCCGAGAGCGGGCCAGTCAGGTAGAGCAGCGGATCC
GAAGATTCAGCTTCAATCTCGACATGTGGCTCAGCAAGGTCCCCGAAGCC
TATCGTTTTACCTCGGGCAGCGGTGACCAGTTGGATCTACCCAGTGACCG
TAACGCTCCCTGGATGCGAGAACGCATCTCCTTAGCCATGAGTTACTACA
GTTCCCGTCTCACGCTTTGCCGTCCGTGCCTCACACATACTGGACTGGCG
CCGGGCGACCCATCCCCCGACCCAGCAGTTCCGCCGTCGGCACGGCAAGG
CTCGCGTCGCATTTCCAGCAGTCGCATGCAATTCAACACTGCCATGGCTT
TGACATGCGTCCGCTCAGCTCGGTCCCTCCTCTGCTGTATCCCGGAAACC
CCGGACATCACATGGTTGACTACCATGACCCCCTGGTGGTGCATTCTTCA
TTACATCATGCAAGCAACAACAACCATCCTTCTCCACCTATCCAGCTGGC
CCACCAGACTTCCCAACGACCCTATGCACCAAGTCTCCGCCGACATCGAA
GCTACATCCCGAGAGACCAAGAAGGCCCTGCGCTGGCTGCACCACATGGC
CTACAAGTATCCCGCCGCCCGACGTGCCTTCCGCCAATGCAACAGTATTG
TACGACGGATTACCCCAAGCCTAGGCATTGATATCAGTGACATCCCCTCC
GGCAAAGACCTACCCACTGAGGACGATGCGTATCATTTGCGAGATATTGA
CAATACCCCGAGTTCCCGCGCCGGGAGTATGGAGTTTGAACGGCATCACT
AA back to topCoding sequence (CDS) from alignment at An12:220980..223631+ >CBS51388_007468-T1 ID=CBS51388_007468-T1|Name=CBS51388_007468-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7434bp|location=Sequence derived from alignment at An12:220980..223631+ (Aspergillus niger CBS 513.88)
ATGGAAGACGCGTCTGGATCCTATCCCTTTGGCGTCGCAACTGCCGACGG
AACTCCCCTCCAAATCGATGCCGAGAATGCTGCCGTGAGGGGCATCAACG
AGTGGTCTTGGGGTTCGATGAGTCCGGGGATACCCCCTGCGGCCTTTCGT
CCCTATTCCTTGCCCCAGTTCATGGACCGACCGGGTCCCTACCCCTATCA
ATCCTCATCGTCGTCATCCCGTGAGCTCTCGGGCTCAGCTGCCAAAGTCG
CCATTCCCCGCACGACCAGCGCCAGTAGCCAGTCGCAACGCCGGCGCTCG
GCGAGAGCCTGCGAGCCATGTCGACAGCGGAAGATCAAGTGTGATGGAAG
CAAGCCAGTGTGTCGACAGTGCATTGATCACAATGTCAGCTGCTTCTTCG
TGGATGTAAAGCGTGTCCGCGATCAGAAACAACTTGGACTCCTAGGCAAG
AAGGTTGAACAATATGAGCGCCTATTACAAGAGCTGGAGAAGGAAGTCGA
TGAGAATGCGGCCAGACGCATCCGAAAAGTCCTTAGGGGCACCGATATAT
CATCTCCTACCGACGATGGCGGCGACTCCGATTCTTCGATTTCGTCCATC
GGTTCGCTGGAGGCACTCGACTTAGTTGAGGAAGACTTGAATCGCAGCGA
GAAAACGGTGGCTACGGGCTTCTTTGGGAAGAATTCGGAAGTCGCTTGGA
TGCAGAAACTTGAAGATGAAGCTAAAAGTCGAAATCGGAAGAAGGAAGAT
TCTACCGATATGGAGGACGGGGTGGCTGGCGGGCACACAATGACGCCGCC
GCAGAAGCAGGAAACAGCGATGGCGGCAATGAGCTATTACTTGGATGACA
TCGGTATTCCATTGATGGACTCTGTTGATCCATACGCACTTCCCCCAAAG
GATTTGGCCAACCGGTTTTTCACTGCGTTTATGGACTCGGTCCATCCGTC
ATTCAATGTCGTCCGCAAGACGGCCTTTGTGTCCCAGTATCGACAGTTCT
TCAGCCAGCCAGCCCAGCCCCCACAGCGTTGGCTAGCCATCTTGAACATG
ATCTTTGCAATTGGATGTCGATATACCCAAGCTACGAGTGGCCGTCCAGA
CAGCGGGGATTACAATGATCTGGTGTACTTGAACCGGGCGCGCAAATTGA
CTCTCAGCGAGAACGTCATCTTTGAGCATGCGGATCTTCAGCAAATCCAG
GTCGAATTTCTGGTAGCACTTTACTTTGTCAGCAAGTGTCAAATAAACAG
GGCATTCAAGTTCTCCAGTATGGCCTTCCGATCGGCCGTGTCCCTGGGAA
TCAACCTACGCTTCGTAGACGATCGTACGCAGTATCCTGCCAAAGAGGCT
CGCATTCGGCTGTGGTGGTCAATATTCCTCCTGGAACATCTTCTCACTGC
GATCACCGGCCGGGTCTCTTGCGTGGGCGAAAGCCTGAGCGCCACACCAC
TACCGATTCCGTACGAAGAGGAAGCGTTCGGCAGACCAGACGTCCTTCCT
CTTCTCCAAGACTCCTCCCTGCGCATGACCCGTCTGAAGCTAACTCTCCT
GCAGTCGGATGAGGAATCACGCGCCGATGTAAGCTGGCTTCCGTCCTGCG
AACCCAGCCCATCGCTATACTTCCACTGTATCGTGGATTTAGCCACCATT
ACCCAGGCGATCATCAACAAAGTCTACAGTATCCAAGGCCTCCGAGAGCG
GGCCAGTCAGGTAGAGCAGCGGATCCGAAGATTCAGCTTCAATCTCGACA
TGTGGCTCAGCAAGGTCCCCGAAGCCTATCGTTTTACCTCGGGCAGCGGT
GACCAGTTGGATCTACCCAGTGACCGTAACGCTCCCTGGATGCGAGAACG
CATCTCCTTAGCCATGAGTTACTACAGTTCCCGTCTCACGCTTTGCCGTC
CGTGCCTCACACATACTGGACTGGCGCCGGGCGACCCATCCCCCGACCCA
GCAGTTCCGCCGTCGGCACGGCAAGGCTCGCGTCGCATTTCCAGCAGTCG
CATGCAATTCAACACTGCCATGGCTTTGACATGCGTCCGCTCAGCTCGGT
CCCTCCTCTGCTGTATCCCGGAAACCCCGGACATCACATGGTTGACTACC
ATGACCCCCTGGTGGTGCATTCTTCATTACATCATGCAAGCAACAACAAC
CATCCTTCTCCACCTATCCAGCTGGCCCACCAGACTTCCCAACGACCCTA
TGCACCAAGTCTCCGCCGACATCGAAGCTACATCCCGAGAGACCAAGAAG
GCCCTGCGCTGGCTGCACCACATGGCCTACAAGTATCCCGCCGCCCGACG
TGCCTTCCGCCAATGCAACAGTATTGTACGACGGATTACCCCAAGCCTAG
GCATTGATATCAGTGACATCCCCTCCGGCAAAGACCTACCCACTGAGGAC
GATGCGTATCATTTGCGAGATATTGACAATACCCCGAGTTCCCGCGCCGG
GAGTATGGAGTTTGAACGGCATCACTAAATGGAAGACGCGTCTGGATCCT
ATCCCTTTGGCGTCGCAACTGCCGACGGAACTCCCCTCCAAATCGATGCC
GAGAATGCTGCCGTGAGGGGCATCAACGAGTGGTCTTGGGGTTCGATGAG
TCCGGGGATACCCCCTGCGGCCTTTCGTCCCTATTCCTTGCCCCAGTTCA
TGGACCGACCGGGTCCCTACCCCTATCAATCCTCATCGTCGTCATCCCGT
GAGCTCTCGGGCTCAGCTGCCAAAGTCGCCATTCCCCGCACGACCAGCGC
CAGTAGCCAGTCGCAACGCCGGCGCTCGGCGAGAGCCTGCGAGCCATGTC
GACAGCGGAAGATCAAGTGTGATGGAAGCAAGCCAGTGTGTCGACAGTGC
ATTGATCACAATGTCAGCTGCTTCTTCGTGGATGTAAAGCGTGTCCGCGA
TCAGAAACAACTTGGACTCCTAGGCAAGAAGGTTGAACAATATGAGCGCC
TATTACAAGAGCTGGAGAAGGAAGTCGATGAGAATGCGGCCAGACGCATC
CGAAAAGTCCTTAGGGGCACCGATATATCATCTCCTACCGACGATGGCGG
CGACTCCGATTCTTCGATTTCGTCCATCGGTTCGCTGGAGGCACTCGACT
TAGTTGAGGAAGACTTGAATCGCAGCGAGAAAACGGTGGCTACGGGCTTC
TTTGGGAAGAATTCGGAAGTCGCTTGGATGCAGAAACTTGAAGATGAAGC
TAAAAGTCGAAATCGGAAGAAGGAAGATTCTACCGATATGGAGGACGGGG
TGGCTGGCGGGCACACAATGACGCCGCCGCAGAAGCAGGAAACAGCGATG
GCGGCAATGAGCTATTACTTGGATGACATCGGTATTCCATTGATGGACTC
TGTTGATCCATACGCACTTCCCCCAAAGGATTTGGCCAACCGGTTTTTCA
CTGCGTTTATGGACTCGGTCCATCCGTCATTCAATGTCGTCCGCAAGACG
GCCTTTGTGTCCCAGTATCGACAGTTCTTCAGCCAGCCAGCCCAGCCCCC
ACAGCGTTGGCTAGCCATCTTGAACATGATCTTTGCAATTGGATGTCGAT
ATACCCAAGCTACGAGTGGCCGTCCAGACAGCGGGGATTACAATGATCTG
GTGTACTTGAACCGGGCGCGCAAATTGACTCTCAGCGAGAACGTCATCTT
TGAGCATGCGGATCTTCAGCAAATCCAGGTCGAATTTCTGGTAGCACTTT
ACTTTGTCAGCAAGTGTCAAATAAACAGGGCATTCAAGTTCTCCAGTATG
GCCTTCCGATCGGCCGTGTCCCTGGGAATCAACCTACGCTTCGTAGACGA
TCGTACGCAGTATCCTGCCAAAGAGGCTCGCATTCGGCTGTGGTGGTCAA
TATTCCTCCTGGAACATCTTCTCACTGCGATCACCGGCCGGGTCTCTTGC
GTGGGCGAAAGCCTGAGCGCCACACCACTACCGATTCCGTACGAAGAGGA
AGCGTTCGGCAGACCAGACGTCCTTCCTCTTCTCCAAGACTCCTCCCTGC
GCATGACCCGTCTGAAGCTAACTCTCCTGCAGTCGGATGAGGAATCACGC
GCCGATGTAAGCTGGCTTCCGTCCTGCGAACCCAGCCCATCGCTATACTT
CCACTGTATCGTGGATTTAGCCACCATTACCCAGGCGATCATCAACAAAG
TCTACAGTATCCAAGGCCTCCGAGAGCGGGCCAGTCAGGTAGAGCAGCGG
ATCCGAAGATTCAGCTTCAATCTCGACATGTGGCTCAGCAAGGTCCCCGA
AGCCTATCGTTTTACCTCGGGCAGCGGTGACCAGTTGGATCTACCCAGTG
ACCGTAACGCTCCCTGGATGCGAGAACGCATCTCCTTAGCCATGAGTTAC
TACAGTTCCCGTCTCACGCTTTGCCGTCCGTGCCTCACACATACTGGACT
GGCGCCGGGCGACCCATCCCCCGACCCAGCAGTTCCGCCGTCGGCACGGC
AAGGCTCGCGTCGCATTTCCAGCAGTCGCATGCAATTCAACACTGCCATG
GCTTTGACATGCGTCCGCTCAGCTCGGTCCCTCCTCTGCTGTATCCCGGA
AACCCCGGACATCACATGGTTGACTACCATGACCCCCTGGTGGTGCATTC
TTCATTACATCATGCAAGCAACAACAACCATCCTTCTCCACCTATCCAGC
TGGCCCACCAGACTTCCCAACGACCCTATGCACCAAGTCTCCGCCGACAT
CGAAGCTACATCCCGAGAGACCAAGAAGGCCCTGCGCTGGCTGCACCACA
TGGCCTACAAGTATCCCGCCGCCCGACGTGCCTTCCGCCAATGCAACAGT
ATTGTACGACGGATTACCCCAAGCCTAGGCATTGATATCAGTGACATCCC
CTCCGGCAAAGACCTACCCACTGAGGACGATGCGTATCATTTGCGAGATA
TTGACAATACCCCGAGTTCCCGCGCCGGGAGTATGGAGTTTGAACGGCAT
CACTAAATGGAAGACGCGTCTGGATCCTATCCCTTTGGCGTCGCAACTGC
CGACGGAACTCCCCTCCAAATCGATGCCGAGAATGCTGCCGTGAGGGGCA
TCAACGAGTGGTCTTGGGGTTCGATGAGTCCGGGGATACCCCCTGCGGCC
TTTCGTCCCTATTCCTTGCCCCAGTTCATGGACCGACCGGGTCCCTACCC
CTATCAATCCTCATCGTCGTCATCCCGTGAGCTCTCGGGCTCAGCTGCCA
AAGTCGCCATTCCCCGCACGACCAGCGCCAGTAGCCAGTCGCAACGCCGG
CGCTCGGCGAGAGCCTGCGAGCCATGTCGACAGCGGAAGATCAAGTGTGA
TGGAAGCAAGCCAGTGTGTCGACAGTGCATTGATCACAATGTCAGCTGCT
TCTTCGTGGATGTAAAGCGTGTCCGCGATCAGAAACAACTTGGACTCCTA
GGCAAGAAGGTTGAACAATATGAGCGCCTATTACAAGAGCTGGAGAAGGA
AGTCGATGAGAATGCGGCCAGACGCATCCGAAAAGTCCTTAGGGGCACCG
ATATATCATCTCCTACCGACGATGGCGGCGACTCCGATTCTTCGATTTCG
TCCATCGGTTCGCTGGAGGCACTCGACTTAGTTGAGGAAGACTTGAATCG
CAGCGAGAAAACGGTGGCTACGGGCTTCTTTGGGAAGAATTCGGAAGTCG
CTTGGATGCAGAAACTTGAAGATGAAGCTAAAAGTCGAAATCGGAAGAAG
GAAGATTCTACCGATATGGAGGACGGGGTGGCTGGCGGGCACACAATGAC
GCCGCCGCAGAAGCAGGAAACAGCGATGGCGGCAATGAGCTATTACTTGG
ATGACATCGGTATTCCATTGATGGACTCTGTTGATCCATACGCACTTCCC
CCAAAGGATTTGGCCAACCGGTTTTTCACTGCGTTTATGGACTCGGTCCA
TCCGTCATTCAATGTCGTCCGCAAGACGGCCTTTGTGTCCCAGTATCGAC
AGTTCTTCAGCCAGCCAGCCCAGCCCCCACAGCGTTGGCTAGCCATCTTG
AACATGATCTTTGCAATTGGATGTCGATATACCCAAGCTACGAGTGGCCG
TCCAGACAGCGGGGATTACAATGATCTGGTGTACTTGAACCGGGCGCGCA
AATTGACTCTCAGCGAGAACGTCATCTTTGAGCATGCGGATCTTCAGCAA
ATCCAGGTCGAATTTCTGGTAGCACTTTACTTTGTCAGCAAGTGTCAAAT
AAACAGGGCATTCAAGTTCTCCAGTATGGCCTTCCGATCGGCCGTGTCCC
TGGGAATCAACCTACGCTTCGTAGACGATCGTACGCAGTATCCTGCCAAA
GAGGCTCGCATTCGGCTGTGGTGGTCAATATTCCTCCTGGAACATCTTCT
CACTGCGATCACCGGCCGGGTCTCTTGCGTGGGCGAAAGCCTGAGCGCCA
CACCACTACCGATTCCGTACGAAGAGGAAGCGTTCGGCAGACCAGACGTC
CTTCCTCTTCTCCAAGACTCCTCCCTGCGCATGACCCGTCTGAAGCTAAC
TCTCCTGCAGTCGGATGAGGAATCACGCGCCGATGTAAGCTGGCTTCCGT
CCTGCGAACCCAGCCCATCGCTATACTTCCACTGTATCGTGGATTTAGCC
ACCATTACCCAGGCGATCATCAACAAAGTCTACAGTATCCAAGGCCTCCG
AGAGCGGGCCAGTCAGGTAGAGCAGCGGATCCGAAGATTCAGCTTCAATC
TCGACATGTGGCTCAGCAAGGTCCCCGAAGCCTATCGTTTTACCTCGGGC
AGCGGTGACCAGTTGGATCTACCCAGTGACCGTAACGCTCCCTGGATGCG
AGAACGCATCTCCTTAGCCATGAGTTACTACAGTTCCCGTCTCACGCTTT
GCCGTCCGTGCCTCACACATACTGGACTGGCGCCGGGCGACCCATCCCCC
GACCCAGCAGTTCCGCCGTCGGCACGGCAAGGCTCGCGTCGCATTTCCAG
CAGTCGCATGCAATTCAACACTGCCATGGCTTTGACATGCGTCCGCTCAG
CTCGGTCCCTCCTCTGCTGTATCCCGGAAACCCCGGACATCACATGGTTG
ACTACCATGACCCCCTGGTGGTGCATTCTTCATTACATCATGCAAGCAAC
AACAACCATCCTTCTCCACCTATCCAGCTGGCCCACCAGACTTCCCAACG
ACCCTATGCACCAAGTCTCCGCCGACATCGAAGCTACATCCCGAGAGACC
AAGAAGGCCCTGCGCTGGCTGCACCACATGGCCTACAAGTATCCCGCCGC
CCGACGTGCCTTCCGCCAATGCAACAGTATTGTACGACGGATTACCCCAA
GCCTAGGCATTGATATCAGTGACATCCCCTCCGGCAAAGACCTACCCACT
GAGGACGATGCGTATCATTTGCGAGATATTGACAATACCCCGAGTTCCCG
CGCCGGGAGTATGGAGTTTGAACGGCATCACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:220980..223631 + |
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