|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:246194..248151+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007473-T1 ID=CBS51388_007473-T1|Name=CBS51388_007473-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1958bp|location=Sequence derived from alignment at An12:246194..248151+ (Aspergillus niger CBS 513.88)
ATGTCTGCCCCCTCATACATGGCAGACCCTCTTACAGTTTTACCACCCGA
GATCGTCTTGCGCGTCGTGGAATTCCTCCCGGTCTCCGCCGTGGCGTCGC
TGACCGCCGTCTCCAAGCCCTGGCACCAATTTATCGACATCACCCATCGA
GAAGCCATCTACAGTTCCGAATCGAAAACCGCCCAACCTCCGGGTGGCGC
CCGCGACTTTTCATTTTTGTCGAACAGCACCACCTCATTTACCAAATTAT
TCGAGAACACTACATCATGGAAAGATCTATGCAAGCGCCAGAAGCTGCTC
GCCCGCAATTGGGCCAACGAGCGCCCCGTGACCCGCGAGTCGGTGCTTCA
AGTCGGCAACAATCCTGTCTGGCGATTCCGGGCAGACTTTAAGCGCCGGT
TCTTCATTTCAACATCACACGCGGGTGGTCTGAATGTTACGGATATGGAT
ACGGGCAGGATCCTATGGCGGCTACCCTCCACGCTGGAACGTGATGAGGG
TTCCGTTCGCCCGTATGCCCATCTGGAGTATCAGGACGGAATGGCGGTCT
TTGACCGTGAGGGAGATGCGCTTGAGGTCTGGCAGGCTGATCAAGAAGGT
GCCAAACGTGGAGAGTTCCGGCGCATTGCGATCTTAGACCACAATTGTCA
GACCAGAGGCTTCCAGTTGTCGTATTGGACGCTGTGTGTGGTCTCCACAC
AGGGGCAAGGCTTTGTGTATGATATGACGCAGCGACCTCCGAAGCTGACT
ACGCACATCTCTATCGAGAATGATGCCGTCGGTCATTTGGATCAGAGCGC
GGACGCTGTTATCTACTCTATGGGCCCCCGAGGCTATCATGTCTACAACA
AGGCGACCGGCGAGTTCTTGGGCGCATTGCAGCCATCCCGTTGCACAGAC
ATGTATCATATCCTTCCGCCGGTCGCTACCTCGCCGTCTGCGATCGCTGC
ACTAGCCGCTGCTGCGCGACATGGTCCGACTCAGCAGATGGTCGCTCTCA
GCAAACCTCGCAAAGACTGCTTGGTGCCAATTGAGCTTTCGAAGGGTCCG
CTTCCACCACCGACTGACTTTGAACACGTAAGGCACGGTGACGACGAATG
GGGTGCGGGTATGCTCCACGGTGACCTGTTCGTTGGCTTCTCCCGCGCTG
GTCGTGTATTCGTATGCTCCAACTGGCGGAAGGCCCTACAGAATGAGAGA
GGGATTTCAGAACATGGGTCCCTTATCGAATGCGAGTCGGACGGTTCTAA
TTTTGACCTGGGCGGCTGGTTGTCTGTGCGCAACCACCGGGTGATGTTTG
AGATTCAGGATCGTATCTATGTCGTGGCCCTCGACGACGAGAACAAGATT
CAGGACGTTAATAAGCCAGCTCGGGCTTCCTACTCTCTGCTCACTAGCTC
GGTGCCACAGCTTGCTGTGCCGGTCAGTTTCATGGCGTTATATGATGATG
CGATCATGACCACCTACACTGTGAGTCCTATGTGCTCTTTTGCCGAATTT
GGCATTAGCAGAAGCAAGCTAATTGATAATTACAGACTCTCGGCTTCCGC
CAACATAACTCTGACATTCCAGACGATGAACAAGACGAGGGGCCTGCTCG
CATCTTCCCCACCAAAGCTATCCGCATTGTCAGCCTAGCGCCCGATCTCT
CCGACGGCAAGTCTGTCCCAATCGATGACCAACAGGCGACAGGCGATGGA
CTCTGGAGCTCTGAACCACGTCAAAGGCGGGCTGAGGATACCTGGCGCTC
ACAGGCAGGGCTCTTGCAGTTGGTCAGCCTGCTCGGGGATGAGCTTGATG
ACGAAGACGAGGCCGAGATGGAGGCCTTAGCCATGGAAAATGAAGAGGAG
TGGGAAGATCTGGATGATGATAACCTTGAAGGTCATGACAATGATCATGA
TCATGAGGGTGATGAGGATTCCGAACCAGAGTCTACGCGTGAACATGGAA
CAGCCTAG back to topCoding sequence (CDS) from alignment at An12:246194..248151+ >CBS51388_007473-T1 ID=CBS51388_007473-T1|Name=CBS51388_007473-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3786bp|location=Sequence derived from alignment at An12:246194..248151+ (Aspergillus niger CBS 513.88)
ATGTCTGCCCCCTCATACATGGCAGACCCTCTTACAGTTTTACCACCCGA
GATCGTCTTGCGCGTCGTGGAATTCCTCCCGGTCTCCGCCGTGGCGTCGC
TGACCGCCGTCTCCAAGCCCTGGCACCAATTTATCGACATCACCCATCGA
GAAGCCATCTACAGTTCCGAATCGAAAACCGCCCAACCTCCGGGTGGCGC
CCGCGACTTTTCATTTTTGTCGAACAGCACCACCTCATTTACCAAATTAT
TCGAGAACACTACATCATGGAAAGATCTATGCAAGCGCCAGAAGCTGCTC
GCCCGCAATTGGGCCAACGAGCGCCCCGTGACCCGCGAGTCGGTGCTTCA
AGTCGGCAACAATCCTGTCTGGCGATTCCGGGCAGACTTTAAGCGCCGGT
TCTTCATTTCAACATCACACGCGGGTGGTCTGAATGTTACGGATATGGAT
ACGGGCAGGATCCTATGGCGGCTACCCTCCACGCTGGAACGTGATGAGGG
TTCCGTTCGCCCGTATGCCCATCTGGAGTATCAGGACGGAATGGCGGTCT
TTGACCGTGAGGGAGATGCGCTTGAGGTCTGGCAGGCTGATCAAGAAGGT
GCCAAACGTGGAGAGTTCCGGCGCATTGCGATCTTAGACCACAATTGTCA
GACCAGAGGCTTCCAGTTGTCGTATTGGACGCTGTGTGTGGTCTCCACAC
AGGGGCAAGGCTTTGTGTATGATATGACGCAGCGACCTCCGAAGCTGACT
ACGCACATCTCTATCGAGAATGATGCCGTCGGTCATTTGGATCAGAGCGC
GGACGCTGTTATCTACTCTATGGGCCCCCGAGGCTATCATGTCTACAACA
AGGCGACCGGCGAGTTCTTGGGCGCATTGCAGCCATCCCGTTGCACAGAC
ATGTATCATATCCTTCCGCCGGTCGCTACCTCGCCGTCTGCGATCGCTGC
ACTAGCCGCTGCTGCGCGACATGGTCCGACTCAGCAGATGGTCGCTCTCA
GCAAACCTCGCAAAGACTGCTTGGTGCCAATTGAGCTTTCGAAGGGTCCG
CTTCCACCACCGACTGACTTTGAACACGTAAGGCACGGTGACGACGAATG
GGGTGCGGGTATGCTCCACGGTGACCTGTTCGTTGGCTTCTCCCGCGCTG
GTCGTGTATTCGTATGCTCCAACTGGCGGAAGGCCCTACAGAATGAGAGA
GGGATTTCAGAACATGGGTCCCTTATCGAATGCGAGTCGGACGGTTCTAA
TTTTGACCTGGGCGGCTGGTTGTCTGTGCGCAACCACCGGGTGATGTTTG
AGATTCAGGATCGTATCTATGTCGTGGCCCTCGACGACGAGAACAAGATT
CAGGACGTTAATAAGCCAGCTCGGGCTTCCTACTCTCTGCTCACTAGCTC
GGTGCCACAGCTTGCTGTGCCGGTCAGTTTCATGGCGTTATATGATGATG
CGATCATGACCACCTACACTACTCTCGGCTTCCGCCAACATAACTCTGAC
ATTCCAGACGATGAACAAGACGAGGGGCCTGCTCGCATCTTCCCCACCAA
AGCTATCCGCATTGTCAGCCTAGCGCCCGATCTCTCCGACGGCAAGTCTG
TCCCAATCGATGACCAACAGGCGACAGGCGATGGACTCTGGAGCTCTGAA
CCACGTCAAAGGCGGGCTGAGGATACCTGGCGCTCACAGGCAGGGCTCTT
GCAGTTGGTCAGCCTGCTCGGGGATGAGCTTGATGACGAAGACGAGGCCG
AGATGGAGGCCTTAGCCATGGAAAATGAAGAGGAGTGGGAAGATCTGGAT
GATGATAACCTTGAAGGTCATGACAATGATCATGATCATGAGGGTGATGA
GGATTCCGAACCAGAGTCTACGCGTGAACATGGAACAGCCTAGATGTCTG
CCCCCTCATACATGGCAGACCCTCTTACAGTTTTACCACCCGAGATCGTC
TTGCGCGTCGTGGAATTCCTCCCGGTCTCCGCCGTGGCGTCGCTGACCGC
CGTCTCCAAGCCCTGGCACCAATTTATCGACATCACCCATCGAGAAGCCA
TCTACAGTTCCGAATCGAAAACCGCCCAACCTCCGGGTGGCGCCCGCGAC
TTTTCATTTTTGTCGAACAGCACCACCTCATTTACCAAATTATTCGAGAA
CACTACATCATGGAAAGATCTATGCAAGCGCCAGAAGCTGCTCGCCCGCA
ATTGGGCCAACGAGCGCCCCGTGACCCGCGAGTCGGTGCTTCAAGTCGGC
AACAATCCTGTCTGGCGATTCCGGGCAGACTTTAAGCGCCGGTTCTTCAT
TTCAACATCACACGCGGGTGGTCTGAATGTTACGGATATGGATACGGGCA
GGATCCTATGGCGGCTACCCTCCACGCTGGAACGTGATGAGGGTTCCGTT
CGCCCGTATGCCCATCTGGAGTATCAGGACGGAATGGCGGTCTTTGACCG
TGAGGGAGATGCGCTTGAGGTCTGGCAGGCTGATCAAGAAGGTGCCAAAC
GTGGAGAGTTCCGGCGCATTGCGATCTTAGACCACAATTGTCAGACCAGA
GGCTTCCAGTTGTCGTATTGGACGCTGTGTGTGGTCTCCACACAGGGGCA
AGGCTTTGTGTATGATATGACGCAGCGACCTCCGAAGCTGACTACGCACA
TCTCTATCGAGAATGATGCCGTCGGTCATTTGGATCAGAGCGCGGACGCT
GTTATCTACTCTATGGGCCCCCGAGGCTATCATGTCTACAACAAGGCGAC
CGGCGAGTTCTTGGGCGCATTGCAGCCATCCCGTTGCACAGACATGTATC
ATATCCTTCCGCCGGTCGCTACCTCGCCGTCTGCGATCGCTGCACTAGCC
GCTGCTGCGCGACATGGTCCGACTCAGCAGATGGTCGCTCTCAGCAAACC
TCGCAAAGACTGCTTGGTGCCAATTGAGCTTTCGAAGGGTCCGCTTCCAC
CACCGACTGACTTTGAACACGTAAGGCACGGTGACGACGAATGGGGTGCG
GGTATGCTCCACGGTGACCTGTTCGTTGGCTTCTCCCGCGCTGGTCGTGT
ATTCGTATGCTCCAACTGGCGGAAGGCCCTACAGAATGAGAGAGGGATTT
CAGAACATGGGTCCCTTATCGAATGCGAGTCGGACGGTTCTAATTTTGAC
CTGGGCGGCTGGTTGTCTGTGCGCAACCACCGGGTGATGTTTGAGATTCA
GGATCGTATCTATGTCGTGGCCCTCGACGACGAGAACAAGATTCAGGACG
TTAATAAGCCAGCTCGGGCTTCCTACTCTCTGCTCACTAGCTCGGTGCCA
CAGCTTGCTGTGCCGGTCAGTTTCATGGCGTTATATGATGATGCGATCAT
GACCACCTACACTACTCTCGGCTTCCGCCAACATAACTCTGACATTCCAG
ACGATGAACAAGACGAGGGGCCTGCTCGCATCTTCCCCACCAAAGCTATC
CGCATTGTCAGCCTAGCGCCCGATCTCTCCGACGGCAAGTCTGTCCCAAT
CGATGACCAACAGGCGACAGGCGATGGACTCTGGAGCTCTGAACCACGTC
AAAGGCGGGCTGAGGATACCTGGCGCTCACAGGCAGGGCTCTTGCAGTTG
GTCAGCCTGCTCGGGGATGAGCTTGATGACGAAGACGAGGCCGAGATGGA
GGCCTTAGCCATGGAAAATGAAGAGGAGTGGGAAGATCTGGATGATGATA
ACCTTGAAGGTCATGACAATGATCATGATCATGAGGGTGATGAGGATTCC
GAACCAGAGTCTACGCGTGAACATGGAACAGCCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR011047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:246194..248151 + |
|
