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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:249550..250950+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007474-T1 ID=CBS51388_007474-T1|Name=CBS51388_007474-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1401bp|location=Sequence derived from alignment at An12:249550..250950+ (Aspergillus niger CBS 513.88)
ATGGCGCCCAAGTATAAGAATCACACGCCTCGGTTGCATCAGTATGTGTT
TTCTTTGCTTACTGTGGATGTGTTGTATAGGAGGTATTTTGACTAACATG
GTCCTGATAGTCTTGGAAAATGGATGCCTTCTACTCTCGATGCCCATCAT
GAATGGCTAGGTGGTGTCATCGCACATGTCGACAGCAAGGAATCTCACGA
CCTTCATCCAGTGATTCAGGAATTTCAGGACCTCATTGAGAACAACACCC
GCGTATACCTGCTCATCTCCGCCATGTTCAATGAACTCCCCCGAAACCGA
ACGTACACCACTGATCCCACTGGCTGTCCCCAGATGCAGGACTACAAGCA
CATGCTACGTGTGCTAAACCATCTCATAACCACTGCTCCCTCATGGAACG
ACTTTTCTCACCGTGTTGGGTTGGTGGGGTTGCCTATTAATGCGGTCTTG
GATTGGCCGATGGGCACCCCGAGTGGATATGCTGCGTTCCTGGACCCAGA
TGTCAACCGCATGATCAAGAAGATTCTTAATGCATGGGGTGATTTCCTCA
AGTCACCGGAGTCGGCGAAGGTGTTGGATGATTCGAAGTACGGGTGGTTC
GGGGAGACAGCTAAATCCGATCTGGAGGAGGTGGGAAATGTGCAGAAGAC
CAATCATTCGTTCGAGGAAATGTATGTCTGCGACCCATCGGCAGAGCATC
ATGGATTCAACTCTTGGGACCATTTCTTCACTCGGTTGTTCCGAGAGGGT
ATCCGTCCCGTTGCCTCACCCAGTGACGACAAGGTCATTGCCAATGCGTG
TGAGTCGCAGCCATACAAGGTGGCGTATGATGTCAAGGCGCGCGACCAGT
TCTGGATCAAGAGCCAGCCCTATTCAGTATATGATATGGTCGGGTGTGAT
CCGTTGGCTAAGCAATTCGAGGGCGGCACGGTCTATCAGGCATTCTTGAG
TGCATTGAGCTATCACCGCTGGCATGCACCGGTGTCGGGAAAGATCGTCA
AGGCGTACGTCGTGGATGGAACGTACTATTCTGAGCCTTTGTTCGAGGGT
ATCGGAGACCCGGATCCATCCACCCAACATGGGATTGATAGCGCTGGTGA
GGTTATGTCTCAAGAATATTTGACAGCCACGGCAACGCGGGCTGTTATAT
TTATCGAATGCGATAACCCTGATATTGGGCTCATGGCGTTCTTGGGTGTG
GGTATGTGCGAGGTCTCAACCTGTGAGATTACCGTCTCCGAGGGCCAGCA
TGTGTCCAAGGGTGATCAGATTGGTATGTTCCATTTCGGTGGCTCCACGC
ATTGTCTGCTCTTCCGGAAGGGGGTCAATGTTCAGGGATTTCCATCACCT
AAGCTGCGACATAATGTGCCTGTCAGAAGCCAGCTAGCGGTGGTGGGTTG
A back to topCoding sequence (CDS) from alignment at An12:249550..250950+ >CBS51388_007474-T1 ID=CBS51388_007474-T1|Name=CBS51388_007474-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2664bp|location=Sequence derived from alignment at An12:249550..250950+ (Aspergillus niger CBS 513.88)
ATGGCGCCCAAGTATAAGAATCACACGCCTCGGTTGCATCATCTTGGAAA
ATGGATGCCTTCTACTCTCGATGCCCATCATGAATGGCTAGGTGGTGTCA
TCGCACATGTCGACAGCAAGGAATCTCACGACCTTCATCCAGTGATTCAG
GAATTTCAGGACCTCATTGAGAACAACACCCGCGTATACCTGCTCATCTC
CGCCATGTTCAATGAACTCCCCCGAAACCGAACGTACACCACTGATCCCA
CTGGCTGTCCCCAGATGCAGGACTACAAGCACATGCTACGTGTGCTAAAC
CATCTCATAACCACTGCTCCCTCATGGAACGACTTTTCTCACCGTGTTGG
GTTGGTGGGGTTGCCTATTAATGCGGTCTTGGATTGGCCGATGGGCACCC
CGAGTGGATATGCTGCGTTCCTGGACCCAGATGTCAACCGCATGATCAAG
AAGATTCTTAATGCATGGGGTGATTTCCTCAAGTCACCGGAGTCGGCGAA
GGTGTTGGATGATTCGAAGTACGGGTGGTTCGGGGAGACAGCTAAATCCG
ATCTGGAGGAGGTGGGAAATGTGCAGAAGACCAATCATTCGTTCGAGGAA
ATGTATGTCTGCGACCCATCGGCAGAGCATCATGGATTCAACTCTTGGGA
CCATTTCTTCACTCGGTTGTTCCGAGAGGGTATCCGTCCCGTTGCCTCAC
CCAGTGACGACAAGGTCATTGCCAATGCGTGTGAGTCGCAGCCATACAAG
GTGGCGTATGATGTCAAGGCGCGCGACCAGTTCTGGATCAAGAGCCAGCC
CTATTCAGTATATGATATGGTCGGGTGTGATCCGTTGGCTAAGCAATTCG
AGGGCGGCACGGTCTATCAGGCATTCTTGAGTGCATTGAGCTATCACCGC
TGGCATGCACCGGTGTCGGGAAAGATCGTCAAGGCGTACGTCGTGGATGG
AACGTACTATTCTGAGCCTTTGTTCGAGGGTATCGGAGACCCGGATCCAT
CCACCCAACATGGGATTGATAGCGCTGGTGAGGTTATGTCTCAAGAATAT
TTGACAGCCACGGCAACGCGGGCTGTTATATTTATCGAATGCGATAACCC
TGATATTGGGCTCATGGCGTTCTTGGGTGTGGGTATGTGCGAGGTCTCAA
CCTGTGAGATTACCGTCTCCGAGGGCCAGCATGTGTCCAAGGGTGATCAG
ATTGGTATGTTCCATTTCGGTGGCTCCACGCATTGTCTGCTCTTCCGGAA
GGGGGTCAATGTTCAGGGATTTCCATCACCTAAGCTGCGACATAATGTGC
CTGTCAGAAGCCAGCTAGCGGTGGTGGGTTGAATGGCGCCCAAGTATAAG
AATCACACGCCTCGGTTGCATCATCTTGGAAAATGGATGCCTTCTACTCT
CGATGCCCATCATGAATGGCTAGGTGGTGTCATCGCACATGTCGACAGCA
AGGAATCTCACGACCTTCATCCAGTGATTCAGGAATTTCAGGACCTCATT
GAGAACAACACCCGCGTATACCTGCTCATCTCCGCCATGTTCAATGAACT
CCCCCGAAACCGAACGTACACCACTGATCCCACTGGCTGTCCCCAGATGC
AGGACTACAAGCACATGCTACGTGTGCTAAACCATCTCATAACCACTGCT
CCCTCATGGAACGACTTTTCTCACCGTGTTGGGTTGGTGGGGTTGCCTAT
TAATGCGGTCTTGGATTGGCCGATGGGCACCCCGAGTGGATATGCTGCGT
TCCTGGACCCAGATGTCAACCGCATGATCAAGAAGATTCTTAATGCATGG
GGTGATTTCCTCAAGTCACCGGAGTCGGCGAAGGTGTTGGATGATTCGAA
GTACGGGTGGTTCGGGGAGACAGCTAAATCCGATCTGGAGGAGGTGGGAA
ATGTGCAGAAGACCAATCATTCGTTCGAGGAAATGTATGTCTGCGACCCA
TCGGCAGAGCATCATGGATTCAACTCTTGGGACCATTTCTTCACTCGGTT
GTTCCGAGAGGGTATCCGTCCCGTTGCCTCACCCAGTGACGACAAGGTCA
TTGCCAATGCGTGTGAGTCGCAGCCATACAAGGTGGCGTATGATGTCAAG
GCGCGCGACCAGTTCTGGATCAAGAGCCAGCCCTATTCAGTATATGATAT
GGTCGGGTGTGATCCGTTGGCTAAGCAATTCGAGGGCGGCACGGTCTATC
AGGCATTCTTGAGTGCATTGAGCTATCACCGCTGGCATGCACCGGTGTCG
GGAAAGATCGTCAAGGCGTACGTCGTGGATGGAACGTACTATTCTGAGCC
TTTGTTCGAGGGTATCGGAGACCCGGATCCATCCACCCAACATGGGATTG
ATAGCGCTGGTGAGGTTATGTCTCAAGAATATTTGACAGCCACGGCAACG
CGGGCTGTTATATTTATCGAATGCGATAACCCTGATATTGGGCTCATGGC
GTTCTTGGGTGTGGGTATGTGCGAGGTCTCAACCTGTGAGATTACCGTCT
CCGAGGGCCAGCATGTGTCCAAGGGTGATCAGATTGGTATGTTCCATTTC
GGTGGCTCCACGCATTGTCTGCTCTTCCGGAAGGGGGTCAATGTTCAGGG
ATTTCCATCACCTAAGCTGCGACATAATGTGCCTGTCAGAAGCCAGCTAG
CGGTGGTGGGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008654 | phospholipid biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004609 | phosphatidylserine decarboxylase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022237 |
| DBxref | InterPro:IPR003817 |
| DBxref | PFAM:PF02666 |
| DBxref | PFAM:PF12588 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:249550..250950 + |
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