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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:340939..342903- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007498-T1 ID=CBS51388_007498-T1|Name=CBS51388_007498-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1965bp|location=Sequence derived from alignment at An12:340939..342903- (Aspergillus niger CBS 513.88)
ATGTCTGGAGATCATGAGGCTGAGATCACTCAGTAAGTTTCCATTGCCTT
TTGTCGTTTGTTTTTTTTTTTTTTTTTTCACACCTCCTGTGGGCTGGCCC
ATCTTCCGTGTCTGTGACTCAGTGAGTCACTATTCCATCACAGCTCACTC
GAATCTCGCTCCCTCCTCCTGCCAATACTGATTGATATCCCAGGCCGCAA
CAACAGGGCCACGGCACCGAAACTATTGTGAACGAAAAGGCGGCATTCAC
CGAGGCCAGCGAAAAGGCCCTCAGTCCCACCCCCGACGGCGAAGAACCCA
ACGCTGAGGAAGTCGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATC
TCCGCATGGCTTGTCGCCGTTGTCGAGCTGTGCGAGCGTTTCACCTACTA
CGGAATGTCTGGCATGTTCCAGAACTACGTTGATCGTCCACTGGACGGAA
GTGAGGGACGCGGTGCCCTAGGCATGGGTCACCAAGGAGCCACTGGTCTC
ACCACTTTCTTCCAGTTCTGGTGTTATGGTTCGTTCACTACTGCATAAAA
TGCTTGGGATCATGGACTGACATTTGCTCAAAGTTACCCCCATCATCGGT
GCCATCGTCGCTGATCAGTACCTCGGTAAATACAAGACCATCGTGGTTTT
CTGTATCATTTACTTGGTCGGACTCCTCATCCTGGTTTGCACGTCCATCC
CGACGGCTCTTCACCATGGAGCCGGTGTTGGTGGCTTCATTGTGTCTATC
CTGATCATTGGTCTGGGAACTGGCGGTATCAAGAGTAACGTTGCTCCTCT
GATTGCCGACCAGTACAAGCGCAAGAAGATGGCCATGTCCACCACCAAGA
AGGGCGAGCGTGTTGTCATTGACCCTTCCCTTACGATTCAGCGCATTTAC
ATGATCTTCTACGGCTGTATCAACGTGGGATCGCTGTCTCTGTTGGCCAC
TCCTTACATGGAGAAGTACATTGGCTTCTGGTCCGGTTATCTGCTTTGCC
TGTGCATGTTCGCTGTCGGTACCATGGTGCTCATCTTCGGCCGCAAGTAC
TACGTCGTTCGCCCTCCCCAGGGCTCCATTATCACCGACGCCTTCAAGGC
GCTGTGGATCATGATTGTCAACCGCAACATGGATGCTCCCAAGCCCAGCT
GGCAGGCGGCCAACAACGGTACCAGGACCAACGTGCCCTGGGACGACCAC
TTCATCGACGAGCTCAAGCGTGCGCTGGTTGCTTGCCGTGTGTTCTGTTT
CTACCCGATCTACTGGGTCGTTTACGGTCAATTCTCCAGCAACTTTGTCA
CCCAGGCCGGCCAGATGGAGGGTCACGGAATCCCGAACGACTTGATGCAG
AACTTTGATCCTATCTCCATCATTGTCTTCATCCCCGTCCTGGAGACCCT
TGTCTATCCCCTGCTGCGTCGCTTGCGCATTCGTTTCCGCCCGATTACCC
GTATTTCCCTGGGTTTCGTTGTTGCCTCCTTGGCCATGATGTACGCCGCC
ATTGTCCAGCACCTCATTTACTCCGCTGGGCCATGCTACGAGCACCCCGG
ATGTGCTGCTTCGGAGGTTGATGGGTCCACCACCGGCAACCACGTGCACA
TTGCTATCCAGACGCCTGCCTATGTCTTCATTGGTCTGTCTGAGATTTTC
GCGTCGGTGTCTGGATTGGAGTATGCCTACACCAAGGCTCCTCCGTCGAT
GAAGTCCTTCGTGCAGTCCATGTACCTGCTCACCAACGCCTTTGGTTCCG
CTCTGGCCGAGGCACTGACCCCCGCTGCCTATGACCCGGCCATCATGTGG
ATGTTCGTGGGTCTGGCTTGCGCTTCGTTCGTTGCCGGTATCATCTTCTG
GCTGGTGTACCACCACCTCAACGACCAGGAAGACCAGCTGAATGCGCTCG
ACGCAGACGATCCGGATGCTCCTGCCCCGCCGGCCTATGAGGAGAAGAAG
GAGCACGAGAACTGA back to topCoding sequence (CDS) from alignment at An12:340939..342903- >CBS51388_007498-T1 ID=CBS51388_007498-T1|Name=CBS51388_007498-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5247bp|location=Sequence derived from alignment at An12:340939..342903- (Aspergillus niger CBS 513.88)
TTACCCCCATCATCGGTGCCATCGTCGCTGATCAGTACCTCGGTAAATAC
AAGACCATCGTGGTTTTCTGTATCATTTACTTGGTCGGACTCCTCATCCT
GGTTTGCACGTCCATCCCGACGGCTCTTCACCATGGAGCCGGTGTTGGTG
GCTTCATTGTGTCTATCCTGATCATTGGTCTGGGAACTGGCGGTATCAAG
AGTAACGTTGCTCCTCTGATTGCCGACCAGTACAAGCGCAAGAAGATGGC
CATGTCCACCACCAAGAAGGGCGAGCGTGTTGTCATTGACCCTTCCCTTA
CGATTCAGCGCATTTACATGATCTTCTACGGCTGTATCAACGTGGGATCG
CTGTCTCTGTTGGCCACTCCTTACATGGAGAAGTACATTGGCTTCTGGTC
CGGTTATCTGCTTTGCCTGTGCATGTTCGCTGTCGGTACCATGGTGCTCA
TCTTCGGCCGCAAGTACTACGTCGTTCGCCCTCCCCAGGGCTCCATTATC
ACCGACGCCTTCAAGGCGCTGTGGATCATGATTGTCAACCGCAACATGGA
TGCTCCCAAGCCCAGCTGGCAGGCGGCCAACAACGGTACCAGGACCAACG
TGCCCTGGGACGACCACTTCATCGACGAGCTCAAGCGTGCGCTGGTTGCT
TGCCGTGTGTTCTGTTTCTACCCGATCTACTGGGTCGTTTACGGTCAATT
CTCCAGCAACTTTGTCACCCAGGCCGGCCAGATGGAGGGTCACGGAATCC
CGAACGACTTGATGCAGAACTTTGATCCTATCTCCATCATTGTCTTCATC
CCCGTCCTGGAGACCCTTGTCTATCCCCTGCTGCGTCGCTTGCGCATTCG
TTTCCGCCCGATTACCCGTATTTCCCTGGGTTTCGTTGTTGCCTCCTTGG
CCATGATGTACGCCGCCATTGTCCAGCACCTCATTTACTCCGCTGGGCCA
TGCTACGAGCACCCCGGATGTGCTGCTTCGGAGGTTGATGGGTCCACCAC
CGGCAACCACGTGCACATTGCTATCCAGACGCCTGCCTATGTCTTCATTG
GTCTGTCTGAGATTTTCGCGTCGGTGTCTGGATTGGAGTATGCCTACACC
AAGGCTCCTCCGTCGATGAAGTCCTTCGTGCAGTCCATGTACCTGCTCAC
CAACGCCTTTGGTTCCGCTCTGGCCGAGGCACTGACCCCCGCTGCCTATG
ACCCGGCCATCATGTGGATGTTCGTGGGTCTGGCTTGCGCTTCGTTCGTT
GCCGGTATCATCTTCTGGCTGGTGTACCACCACCTCAACGACCAGGAAGA
CCAGCTGAATGCGCTCGACGCAGACGATCCGGATGCTCCTGCCCCGCCGG
CCTATGAGGAGAAGAAGGAGCACGAGAACTGAGCCGCAACAACAGGGCCA
CGGCACCGAAACTATTGTGAACGAAAAGGCGGCATTCACCGAGGCCAGCG
AAAAGGCCCTCAGTCCCACCCCCGACGGCGAAGAACCCAACGCTGAGGAA
GTCGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTCCGCATGGCT
TGTCGCCGTTGTCGAGCTGTGCGAGCGTTTCACCTACTACGGAATGTCTG
GCATGTTCCAGAACTACGTTGATCGTCCACTGGACGGAAGTGAGGGACGC
GGTGCCCTAGGCATGGGTCACCAAGGAGCCACTGGTCTCACCACTTTCTT
CCAGTTCTGGTGTTATGATGTCTGGAGATCATGAGGCTGAGATCACTCAT
TACCCCCATCATCGGTGCCATCGTCGCTGATCAGTACCTCGGTAAATACA
AGACCATCGTGGTTTTCTGTATCATTTACTTGGTCGGACTCCTCATCCTG
GTTTGCACGTCCATCCCGACGGCTCTTCACCATGGAGCCGGTGTTGGTGG
CTTCATTGTGTCTATCCTGATCATTGGTCTGGGAACTGGCGGTATCAAGA
GTAACGTTGCTCCTCTGATTGCCGACCAGTACAAGCGCAAGAAGATGGCC
ATGTCCACCACCAAGAAGGGCGAGCGTGTTGTCATTGACCCTTCCCTTAC
GATTCAGCGCATTTACATGATCTTCTACGGCTGTATCAACGTGGGATCGC
TGTCTCTGTTGGCCACTCCTTACATGGAGAAGTACATTGGCTTCTGGTCC
GGTTATCTGCTTTGCCTGTGCATGTTCGCTGTCGGTACCATGGTGCTCAT
CTTCGGCCGCAAGTACTACGTCGTTCGCCCTCCCCAGGGCTCCATTATCA
CCGACGCCTTCAAGGCGCTGTGGATCATGATTGTCAACCGCAACATGGAT
GCTCCCAAGCCCAGCTGGCAGGCGGCCAACAACGGTACCAGGACCAACGT
GCCCTGGGACGACCACTTCATCGACGAGCTCAAGCGTGCGCTGGTTGCTT
GCCGTGTGTTCTGTTTCTACCCGATCTACTGGGTCGTTTACGGTCAATTC
TCCAGCAACTTTGTCACCCAGGCCGGCCAGATGGAGGGTCACGGAATCCC
GAACGACTTGATGCAGAACTTTGATCCTATCTCCATCATTGTCTTCATCC
CCGTCCTGGAGACCCTTGTCTATCCCCTGCTGCGTCGCTTGCGCATTCGT
TTCCGCCCGATTACCCGTATTTCCCTGGGTTTCGTTGTTGCCTCCTTGGC
CATGATGTACGCCGCCATTGTCCAGCACCTCATTTACTCCGCTGGGCCAT
GCTACGAGCACCCCGGATGTGCTGCTTCGGAGGTTGATGGGTCCACCACC
GGCAACCACGTGCACATTGCTATCCAGACGCCTGCCTATGTCTTCATTGG
TCTGTCTGAGATTTTCGCGTCGGTGTCTGGATTGGAGTATGCCTACACCA
AGGCTCCTCCGTCGATGAAGTCCTTCGTGCAGTCCATGTACCTGCTCACC
AACGCCTTTGGTTCCGCTCTGGCCGAGGCACTGACCCCCGCTGCCTATGA
CCCGGCCATCATGTGGATGTTCGTGGGTCTGGCTTGCGCTTCGTTCGTTG
CCGGTATCATCTTCTGGCTGGTGTACCACCACCTCAACGACCAGGAAGAC
CAGCTGAATGCGCTCGACGCAGACGATCCGGATGCTCCTGCCCCGCCGGC
CTATGAGGAGAAGAAGGAGCACGAGAACTGAGCCGCAACAACAGGGCCAC
GGCACCGAAACTATTGTGAACGAAAAGGCGGCATTCACCGAGGCCAGCGA
AAAGGCCCTCAGTCCCACCCCCGACGGCGAAGAACCCAACGCTGAGGAAG
TCGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTCCGCATGGCTT
GTCGCCGTTGTCGAGCTGTGCGAGCGTTTCACCTACTACGGAATGTCTGG
CATGTTCCAGAACTACGTTGATCGTCCACTGGACGGAAGTGAGGGACGCG
GTGCCCTAGGCATGGGTCACCAAGGAGCCACTGGTCTCACCACTTTCTTC
CAGTTCTGGTGTTATGATGTCTGGAGATCATGAGGCTGAGATCACTCATT
ACCCCCATCATCGGTGCCATCGTCGCTGATCAGTACCTCGGTAAATACAA
GACCATCGTGGTTTTCTGTATCATTTACTTGGTCGGACTCCTCATCCTGG
TTTGCACGTCCATCCCGACGGCTCTTCACCATGGAGCCGGTGTTGGTGGC
TTCATTGTGTCTATCCTGATCATTGGTCTGGGAACTGGCGGTATCAAGAG
TAACGTTGCTCCTCTGATTGCCGACCAGTACAAGCGCAAGAAGATGGCCA
TGTCCACCACCAAGAAGGGCGAGCGTGTTGTCATTGACCCTTCCCTTACG
ATTCAGCGCATTTACATGATCTTCTACGGCTGTATCAACGTGGGATCGCT
GTCTCTGTTGGCCACTCCTTACATGGAGAAGTACATTGGCTTCTGGTCCG
GTTATCTGCTTTGCCTGTGCATGTTCGCTGTCGGTACCATGGTGCTCATC
TTCGGCCGCAAGTACTACGTCGTTCGCCCTCCCCAGGGCTCCATTATCAC
CGACGCCTTCAAGGCGCTGTGGATCATGATTGTCAACCGCAACATGGATG
CTCCCAAGCCCAGCTGGCAGGCGGCCAACAACGGTACCAGGACCAACGTG
CCCTGGGACGACCACTTCATCGACGAGCTCAAGCGTGCGCTGGTTGCTTG
CCGTGTGTTCTGTTTCTACCCGATCTACTGGGTCGTTTACGGTCAATTCT
CCAGCAACTTTGTCACCCAGGCCGGCCAGATGGAGGGTCACGGAATCCCG
AACGACTTGATGCAGAACTTTGATCCTATCTCCATCATTGTCTTCATCCC
CGTCCTGGAGACCCTTGTCTATCCCCTGCTGCGTCGCTTGCGCATTCGTT
TCCGCCCGATTACCCGTATTTCCCTGGGTTTCGTTGTTGCCTCCTTGGCC
ATGATGTACGCCGCCATTGTCCAGCACCTCATTTACTCCGCTGGGCCATG
CTACGAGCACCCCGGATGTGCTGCTTCGGAGGTTGATGGGTCCACCACCG
GCAACCACGTGCACATTGCTATCCAGACGCCTGCCTATGTCTTCATTGGT
CTGTCTGAGATTTTCGCGTCGGTGTCTGGATTGGAGTATGCCTACACCAA
GGCTCCTCCGTCGATGAAGTCCTTCGTGCAGTCCATGTACCTGCTCACCA
ACGCCTTTGGTTCCGCTCTGGCCGAGGCACTGACCCCCGCTGCCTATGAC
CCGGCCATCATGTGGATGTTCGTGGGTCTGGCTTGCGCTTCGTTCGTTGC
CGGTATCATCTTCTGGCTGGTGTACCACCACCTCAACGACCAGGAAGACC
AGCTGAATGCGCTCGACGCAGACGATCCGGATGCTCCTGCCCCGCCGGCC
TATGAGGAGAAGAAGGAGCACGAGAACTGAGCCGCAACAACAGGGCCACG
GCACCGAAACTATTGTGAACGAAAAGGCGGCATTCACCGAGGCCAGCGAA
AAGGCCCTCAGTCCCACCCCCGACGGCGAAGAACCCAACGCTGAGGAAGT
CGCTACTCTTCGCCATGTTGCCGAGCATCTGCCCATCTCCGCATGGCTTG
TCGCCGTTGTCGAGCTGTGCGAGCGTTTCACCTACTACGGAATGTCTGGC
ATGTTCCAGAACTACGTTGATCGTCCACTGGACGGAAGTGAGGGACGCGG
TGCCCTAGGCATGGGTCACCAAGGAGCCACTGGTCTCACCACTTTCTTCC
AGTTCTGGTGTTATGATGTCTGGAGATCATGAGGCTGAGATCACTCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR000109 |
| DBxref | PFAM:PF00854 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:340939..342903 - |
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