|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:352162..352977- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007502-T1 ID=CBS51388_007502-T1|Name=CBS51388_007502-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=816bp|location=Sequence derived from alignment at An12:352162..352977- (Aspergillus niger CBS 513.88)
ATGGCCGAATCTACAAAACTCATCTACCAACAAGACGGACAGCTGCTGCT
CCACGGCGCCAAAGTTCTGTCCATCATCCCAGTTTCCAAACTCCCAGAGG
CAGACCAAGCCCTGGCCAAAGACTCAGCCGAAATAGAGCATGCCGTGGTC
ACTGACTCCACGATCTTCCACGTCCAGGGCGGCGGACAGCCCTCAGACAC
CGGAACCATGACCACGGACGTAGCGCCCAAAGCAGACTTAATCTTCGAAG
TGAAGTCAGTCCGCCAACCAGCCCAGGGGAACCAGATCCTTCACTTGGGT
CGGTTCGTCCCGGTCGGGACTACGCAGTTCGACTCCGGGGAGGAAGTCCA
GCAGCGCGTTGACGCTGAGAAGCGGAACCTGCACTCTCGTCTTCATACCG
CTGGACACGTCATGAGTTTGGCGATTCATGCGCTGTGTCGCGAGGGTGTG
CTTCCCCCGGTGAAGGAGTCGAAGGCGTCGCATTATCCGGGTTCGGCGTC
GGTTTCTTTCGAGGGGACGTTGGAGGGTAAGCATAAGGAGCTTATTCAGG
CGAAGACGGATGAGTTTGTGCGGTCGGCGAGTCCGGTTAGGATTCATTGG
TGGTCCATGGAGGAGTTGAAGGAGAAGTGTTATGTTGCGGAGGGGTTTGC
GTTGCCTGAGGGTGAGACGCTGGGGAGAGTGGTTGAGATGGAAGGGTTGG
GAAGTTATCCTTGTGGTGGGACGCATGTGACGGATTGTAGTCTTGTGGGG
AAGATTGAGGTGAAGAAGATTTCAAGGTCGAAGGGGGTTAGTAGGGTGTC
GTATACTGTTGTATAG back to topCoding sequence (CDS) from alignment at An12:352162..352977- >CBS51388_007502-T1 ID=CBS51388_007502-T1|Name=CBS51388_007502-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=816bp|location=Sequence derived from alignment at An12:352162..352977- (Aspergillus niger CBS 513.88)
ATGGCCGAATCTACAAAACTCATCTACCAACAAGACGGACAGCTGCTGCT
CCACGGCGCCAAAGTTCTGTCCATCATCCCAGTTTCCAAACTCCCAGAGG
CAGACCAAGCCCTGGCCAAAGACTCAGCCGAAATAGAGCATGCCGTGGTC
ACTGACTCCACGATCTTCCACGTCCAGGGCGGCGGACAGCCCTCAGACAC
CGGAACCATGACCACGGACGTAGCGCCCAAAGCAGACTTAATCTTCGAAG
TGAAGTCAGTCCGCCAACCAGCCCAGGGGAACCAGATCCTTCACTTGGGT
CGGTTCGTCCCGGTCGGGACTACGCAGTTCGACTCCGGGGAGGAAGTCCA
GCAGCGCGTTGACGCTGAGAAGCGGAACCTGCACTCTCGTCTTCATACCG
CTGGACACGTCATGAGTTTGGCGATTCATGCGCTGTGTCGCGAGGGTGTG
CTTCCCCCGGTGAAGGAGTCGAAGGCGTCGCATTATCCGGGTTCGGCGTC
GGTTTCTTTCGAGGGGACGTTGGAGGGTAAGCATAAGGAGCTTATTCAGG
CGAAGACGGATGAGTTTGTGCGGTCGGCGAGTCCGGTTAGGATTCATTGG
TGGTCCATGGAGGAGTTGAAGGAGAAGTGTTATGTTGCGGAGGGGTTTGC
GTTGCCTGAGGGTGAGACGCTGGGGAGAGTGGTTGAGATGGAAGGGTTGG
GAAGTTATCCTTGTGGTGGGACGCATGTGACGGATTGTAGTCTTGTGGGG
AAGATTGAGGTGAAGAAGATTTCAAGGTCGAAGGGGGTTAGTAGGGTGTC
GTATACTGTTGTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006419 | alanyl-tRNA aminoacylation |
| GO:0043039 | tRNA aminoacylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000166 | nucleotide binding |
| GO:0003676 | nucleic acid binding |
| GO:0004813 | alanine-tRNA ligase activity |
| GO:0005524 | ATP binding |
| GO:0004812 | aminoacyl-tRNA ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009000 |
| DBxref | InterPro:IPR018163 |
| DBxref | InterPro:IPR018165 |
| DBxref | InterPro:IPR012947 |
| DBxref | PFAM:PF07973 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:352162..352977 - |
|
