|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:381873..382952+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007513-T1 ID=CBS51388_007513-T1|Name=CBS51388_007513-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1080bp|location=Sequence derived from alignment at An12:381873..382952+ (Aspergillus niger CBS 513.88)
ATGTCGCTTCCCTCCCCTCCCCCCCTTGTGTTTATCACCGGCGCGACGGG
GTTCATCGGCTTCCAAGTCGCCCTCGTATCCCTACAGGCGGGATACCGAG
TGCGACTAAGCATCCGCAGACCCGAGCAGGAAGCCGTTCTACGGGACCGT
TACCCGGATTTCAACAACCAAATTGAGACTATAATCATTCCTGATATCAC
AGTCCGAGACGCATTCAAACCTGCTCTTGACGGCGTGGATCACCTTATTC
ACCTGGCCTCACCAATGCCAGGTGCCGGTTTCGACCTGCAAACAGGGTAT
ATCGATCCGGCAGTCAAAGGCACCGAATCCGTTCTCTTTTCCGCGCTAGG
GTTCCCTCAGATCAAGAAAGTGATTATTGTATCATCAGTACTAGCTTTAA
CACCTCCTATGTCTCTTTGCGAGAAAGACGTGCTTGTCAGAGGTGATTTT
ATTTCGTCGCATCCTTACAGTGATCCAAAGAAAGACTGATCAACAGATAC
TATAGACAACACGAATGAAATTATCCCCATAGACCTAACCCCAGACTTGC
TCGAAGGCCCCTTCGGACATGGTTTCAAATATAGCATCTCGAAGATATCA
GCCCATCAAGTCACACGGGACTTCCTGGCCAGTCAGAACCCGCACTTTAC
CCTTGTCACCTTCCACCCCAGTTTCGTCCTCGGCGAGAGTCTGATTCAAG
AAACGCCCGAGAAGATGGACGGAATAAACTCGATGTTTTGGGATAGCCTA
CATTCTGGAAAGCCAACGATACCGAACGCGTGGGTGGATGTGCGGGACGT
GGCAGAGGCACACTTGCGGGCGCTGCAGACGGAGATTGTCTCTGGGACGG
AATTCATTTTGTCGGCACCGGCTGGATCGTGGGAACGGGTAGGGGACCTG
GTGAGACGGAAGTTCCCTTCTGTCAGATGTCAATTGAAGGGTCTGATCGA
AGGAGGGTGGACGGTTGATACTACAGCTGCGGAGAGGATCTTAGGTATGC
AGTGGAGGGGACAGGATGAAATGGTCGAGGCAGTACTGGAGCAGCAGCTC
AGGTTGAGGGAAGCTGTTACCTCTCTGTAA back to topCoding sequence (CDS) from alignment at An12:381873..382952+ >CBS51388_007513-T1 ID=CBS51388_007513-T1|Name=CBS51388_007513-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2034bp|location=Sequence derived from alignment at An12:381873..382952+ (Aspergillus niger CBS 513.88)
ATGTCGCTTCCCTCCCCTCCCCCCCTTGTGTTTATCACCGGCGCGACGGG
GTTCATCGGCTTCCAAGTCGCCCTCGTATCCCTACAGGCGGGATACCGAG
TGCGACTAAGCATCCGCAGACCCGAGCAGGAAGCCGTTCTACGGGACCGT
TACCCGGATTTCAACAACCAAATTGAGACTATAATCATTCCTGATATCAC
AGTCCGAGACGCATTCAAACCTGCTCTTGACGGCGTGGATCACCTTATTC
ACCTGGCCTCACCAATGCCAGGTGCCGGTTTCGACCTGCAAACAGGGTAT
ATCGATCCGGCAGTCAAAGGCACCGAATCCGTTCTCTTTTCCGCGCTAGG
GTTCCCTCAGATCAAGAAAGTGATTATTGTATCATCAGTACTAGCTTTAA
CACCTCCTATGTCTCTTTGCGAGAAAGACGTGCTTGTCAGAGACAACACG
AATGAAATTATCCCCATAGACCTAACCCCAGACTTGCTCGAAGGCCCCTT
CGGACATGGTTTCAAATATAGCATCTCGAAGATATCAGCCCATCAAGTCA
CACGGGACTTCCTGGCCAGTCAGAACCCGCACTTTACCCTTGTCACCTTC
CACCCCAGTTTCGTCCTCGGCGAGAGTCTGATTCAAGAAACGCCCGAGAA
GATGGACGGAATAAACTCGATGTTTTGGGATAGCCTACATTCTGGAAAGC
CAACGATACCGAACGCGTGGGTGGATGTGCGGGACGTGGCAGAGGCACAC
TTGCGGGCGCTGCAGACGGAGATTGTCTCTGGGACGGAATTCATTTTGTC
GGCACCGGCTGGATCGTGGGAACGGGTAGGGGACCTGGTGAGACGGAAGT
TCCCTTCTGTCAGATGTCAATTGAAGGGTCTGATCGAAGGAGGGTGGACG
GTTGATACTACAGCTGCGGAGAGGATCTTAGGTATGCAGTGGAGGGGACA
GGATGAAATGGTCGAGGCAGTACTGGAGCAGCAGCTCAGGTTGAGGGAAG
CTGTTACCTCTCTGTAAATGTCGCTTCCCTCCCCTCCCCCCCTTGTGTTT
ATCACCGGCGCGACGGGGTTCATCGGCTTCCAAGTCGCCCTCGTATCCCT
ACAGGCGGGATACCGAGTGCGACTAAGCATCCGCAGACCCGAGCAGGAAG
CCGTTCTACGGGACCGTTACCCGGATTTCAACAACCAAATTGAGACTATA
ATCATTCCTGATATCACAGTCCGAGACGCATTCAAACCTGCTCTTGACGG
CGTGGATCACCTTATTCACCTGGCCTCACCAATGCCAGGTGCCGGTTTCG
ACCTGCAAACAGGGTATATCGATCCGGCAGTCAAAGGCACCGAATCCGTT
CTCTTTTCCGCGCTAGGGTTCCCTCAGATCAAGAAAGTGATTATTGTATC
ATCAGTACTAGCTTTAACACCTCCTATGTCTCTTTGCGAGAAAGACGTGC
TTGTCAGAGACAACACGAATGAAATTATCCCCATAGACCTAACCCCAGAC
TTGCTCGAAGGCCCCTTCGGACATGGTTTCAAATATAGCATCTCGAAGAT
ATCAGCCCATCAAGTCACACGGGACTTCCTGGCCAGTCAGAACCCGCACT
TTACCCTTGTCACCTTCCACCCCAGTTTCGTCCTCGGCGAGAGTCTGATT
CAAGAAACGCCCGAGAAGATGGACGGAATAAACTCGATGTTTTGGGATAG
CCTACATTCTGGAAAGCCAACGATACCGAACGCGTGGGTGGATGTGCGGG
ACGTGGCAGAGGCACACTTGCGGGCGCTGCAGACGGAGATTGTCTCTGGG
ACGGAATTCATTTTGTCGGCACCGGCTGGATCGTGGGAACGGGTAGGGGA
CCTGGTGAGACGGAAGTTCCCTTCTGTCAGATGTCAATTGAAGGGTCTGA
TCGAAGGAGGGTGGACGGTTGATACTACAGCTGCGGAGAGGATCTTAGGT
ATGCAGTGGAGGGGACAGGATGAAATGGTCGAGGCAGTACTGGAGCAGCA
GCTCAGGTTGAGGGAAGCTGTTACCTCTCTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:381873..382952 + |
|
