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CBS51388_007516-T1, CBS51388_007516-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007516-T1
Unique NameCBS51388_007516-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:396669..397821-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007516-T1 ID=CBS51388_007516-T1|Name=CBS51388_007516-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1153bp|location=Sequence derived from alignment at An12:396669..397821- (Aspergillus niger CBS 513.88)
ATGATCGAGTCCTTCATCAAGGCGACTCCAACTCTCCCTTGGCCTGAGCC
ATCGCCCACCTCGTCGGTGGCGCCCATTCCCACTGTCGTTCCCGGCAGTG
ATCCCATCTTCCAGGTGCTCCATGACACCGGGAAACGGACACTATGGTAA
GACTGTTGCTGACGGAAATACGGAAATGTGACGAGTATAGCTAATGTCGA
GTTACACAGGGTGGTTACTGTGCTCATGGGTATCTCCTCTCTCGTGTTCT
ACGTTCTAGGTGCTCGGGTCCCTATCGTAAGTTCTCAGCAGCTACCACTG
AATCTTGGGAACGGTAACTAACTATACTCTTGACTAGACTAAACGCGTGT
TCCACGTTCTCGTTGCTCTCGCCAGCACCATCTCCTTTATCATCTACCTC
GCTCTGGCGACAGGACAAGGCATGGACTGGAAGCTCGACATCATCAAGGA
GCACAACAAGCATGTCCCCAACACCACGCAGGAATACTACCGTCAAATTC
TCTGGCTCCGCTATGTCCTTTGGTTCTTGACGGAGCCTTTGGGTCTCATC
AGCTTGTCGCTGCTCTCCGGTCTGCCTGGCGCCCACCTACTCATCGCCAT
CGCGGCCGACTTTATCATGCTGGGCTCGGGCATTCTGGGCACCTATGCCG
GCCATTCCTCGCGCAGATGGGTCTGGTTCACTATTAGCGCAATCGGATAT
CTTACAACAGTCTACCATATCAGTGTCCATGGAAGCCGGGCAGCGAGCAA
CAAGGATGTCCAGACCAAGCGGTTCTTCGGAACTCTGTCGGGCGTCATGT
TGTTTGTCAAGCTCTTGTACCCAGTGTATGTTCCTTTGGCCCAAGAGGAT
CTGTTGAACAATGTACTAACATGGAATAGGGCCCTCGCTGCTGGAGCTTT
GGCGCTGAAAATCAACGTTGATGTCGAGACCATCCTCTTTGCCATCTACG
ATATCTTCTCCCAGGGTATTCTCGGTTATTGGCTGCTCATTGCGCATGAC
GGCGCTCCTGGAATGTATGTACCAACCGCTCATTGGTTTGGAACCTAGCG
TCAAACTAACCATCTCATCAGTACCCTCAACGTTGACGGATTTTGGTCCC
ACGGCCTGGGTAACGAGGGCGCTATTCGCATCAGCGAAGAAGACGGAGCA
TAA
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Coding sequence (CDS) from alignment at An12:396669..397821-

>CBS51388_007516-T1 ID=CBS51388_007516-T1|Name=CBS51388_007516-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4590bp|location=Sequence derived from alignment at An12:396669..397821- (Aspergillus niger CBS 513.88)
TACCCTCAACGTTGACGGATTTTGGTCCCACGGCCTGGGTAACGAGGGCG
CTATTCGCATCAGCGAAGAAGACGGAGCATAAGGCCCTCGCTGCTGGAGC
TTTGGCGCTGAAAATCAACGTTGATGTCGAGACCATCCTCTTTGCCATCT
ACGATATCTTCTCCCAGGGTATTCTCGGTTATTGGCTGCTCATTGCGCAT
GACGGCGCTCCTGGAATACTAAACGCGTGTTCCACGTTCTCGTTGCTCTC
GCCAGCACCATCTCCTTTATCATCTACCTCGCTCTGGCGACAGGACAAGG
CATGGACTGGAAGCTCGACATCATCAAGGAGCACAACAAGCATGTCCCCA
ACACCACGCAGGAATACTACCGTCAAATTCTCTGGCTCCGCTATGTCCTT
TGGTTCTTGACGGAGCCTTTGGGTCTCATCAGCTTGTCGCTGCTCTCCGG
TCTGCCTGGCGCCCACCTACTCATCGCCATCGCGGCCGACTTTATCATGC
TGGGCTCGGGCATTCTGGGCACCTATGCCGGCCATTCCTCGCGCAGATGG
GTCTGGTTCACTATTAGCGCAATCGGATATCTTACAACAGTCTACCATAT
CAGTGTCCATGGAAGCCGGGCAGCGAGCAACAAGGATGTCCAGACCAAGC
GGTTCTTCGGAACTCTGTCGGGCGTCATGTTGTTTGTCAAGCTCTTGTAC
CCAGTGGTGGTTACTGTGCTCATGGGTATCTCCTCTCTCGTGTTCTACGT
TCTAGGTGCTCGGGTCCCTATCATGATCGAGTCCTTCATCAAGGCGACTC
CAACTCTCCCTTGGCCTGAGCCATCGCCCACCTCGTCGGTGGCGCCCATT
CCCACTGTCGTTCCCGGCAGTGATCCCATCTTCCAGGTGCTCCATGACAC
CGGGAAACGGACACTATGTACCCTCAACGTTGACGGATTTTGGTCCCACG
GCCTGGGTAACGAGGGCGCTATTCGCATCAGCGAAGAAGACGGAGCATAA
GGCCCTCGCTGCTGGAGCTTTGGCGCTGAAAATCAACGTTGATGTCGAGA
CCATCCTCTTTGCCATCTACGATATCTTCTCCCAGGGTATTCTCGGTTAT
TGGCTGCTCATTGCGCATGACGGCGCTCCTGGAATACTAAACGCGTGTTC
CACGTTCTCGTTGCTCTCGCCAGCACCATCTCCTTTATCATCTACCTCGC
TCTGGCGACAGGACAAGGCATGGACTGGAAGCTCGACATCATCAAGGAGC
ACAACAAGCATGTCCCCAACACCACGCAGGAATACTACCGTCAAATTCTC
TGGCTCCGCTATGTCCTTTGGTTCTTGACGGAGCCTTTGGGTCTCATCAG
CTTGTCGCTGCTCTCCGGTCTGCCTGGCGCCCACCTACTCATCGCCATCG
CGGCCGACTTTATCATGCTGGGCTCGGGCATTCTGGGCACCTATGCCGGC
CATTCCTCGCGCAGATGGGTCTGGTTCACTATTAGCGCAATCGGATATCT
TACAACAGTCTACCATATCAGTGTCCATGGAAGCCGGGCAGCGAGCAACA
AGGATGTCCAGACCAAGCGGTTCTTCGGAACTCTGTCGGGCGTCATGTTG
TTTGTCAAGCTCTTGTACCCAGTGGTGGTTACTGTGCTCATGGGTATCTC
CTCTCTCGTGTTCTACGTTCTAGGTGCTCGGGTCCCTATCATGATCGAGT
CCTTCATCAAGGCGACTCCAACTCTCCCTTGGCCTGAGCCATCGCCCACC
TCGTCGGTGGCGCCCATTCCCACTGTCGTTCCCGGCAGTGATCCCATCTT
CCAGGTGCTCCATGACACCGGGAAACGGACACTATGTACCCTCAACGTTG
ACGGATTTTGGTCCCACGGCCTGGGTAACGAGGGCGCTATTCGCATCAGC
GAAGAAGACGGAGCATAAGGCCCTCGCTGCTGGAGCTTTGGCGCTGAAAA
TCAACGTTGATGTCGAGACCATCCTCTTTGCCATCTACGATATCTTCTCC
CAGGGTATTCTCGGTTATTGGCTGCTCATTGCGCATGACGGCGCTCCTGG
AATACTAAACGCGTGTTCCACGTTCTCGTTGCTCTCGCCAGCACCATCTC
CTTTATCATCTACCTCGCTCTGGCGACAGGACAAGGCATGGACTGGAAGC
TCGACATCATCAAGGAGCACAACAAGCATGTCCCCAACACCACGCAGGAA
TACTACCGTCAAATTCTCTGGCTCCGCTATGTCCTTTGGTTCTTGACGGA
GCCTTTGGGTCTCATCAGCTTGTCGCTGCTCTCCGGTCTGCCTGGCGCCC
ACCTACTCATCGCCATCGCGGCCGACTTTATCATGCTGGGCTCGGGCATT
CTGGGCACCTATGCCGGCCATTCCTCGCGCAGATGGGTCTGGTTCACTAT
TAGCGCAATCGGATATCTTACAACAGTCTACCATATCAGTGTCCATGGAA
GCCGGGCAGCGAGCAACAAGGATGTCCAGACCAAGCGGTTCTTCGGAACT
CTGTCGGGCGTCATGTTGTTTGTCAAGCTCTTGTACCCAGTGGTGGTTAC
TGTGCTCATGGGTATCTCCTCTCTCGTGTTCTACGTTCTAGGTGCTCGGG
TCCCTATCATGATCGAGTCCTTCATCAAGGCGACTCCAACTCTCCCTTGG
CCTGAGCCATCGCCCACCTCGTCGGTGGCGCCCATTCCCACTGTCGTTCC
CGGCAGTGATCCCATCTTCCAGGTGCTCCATGACACCGGGAAACGGACAC
TATGTACCCTCAACGTTGACGGATTTTGGTCCCACGGCCTGGGTAACGAG
GGCGCTATTCGCATCAGCGAAGAAGACGGAGCATAAGGCCCTCGCTGCTG
GAGCTTTGGCGCTGAAAATCAACGTTGATGTCGAGACCATCCTCTTTGCC
ATCTACGATATCTTCTCCCAGGGTATTCTCGGTTATTGGCTGCTCATTGC
GCATGACGGCGCTCCTGGAATACTAAACGCGTGTTCCACGTTCTCGTTGC
TCTCGCCAGCACCATCTCCTTTATCATCTACCTCGCTCTGGCGACAGGAC
AAGGCATGGACTGGAAGCTCGACATCATCAAGGAGCACAACAAGCATGTC
CCCAACACCACGCAGGAATACTACCGTCAAATTCTCTGGCTCCGCTATGT
CCTTTGGTTCTTGACGGAGCCTTTGGGTCTCATCAGCTTGTCGCTGCTCT
CCGGTCTGCCTGGCGCCCACCTACTCATCGCCATCGCGGCCGACTTTATC
ATGCTGGGCTCGGGCATTCTGGGCACCTATGCCGGCCATTCCTCGCGCAG
ATGGGTCTGGTTCACTATTAGCGCAATCGGATATCTTACAACAGTCTACC
ATATCAGTGTCCATGGAAGCCGGGCAGCGAGCAACAAGGATGTCCAGACC
AAGCGGTTCTTCGGAACTCTGTCGGGCGTCATGTTGTTTGTCAAGCTCTT
GTACCCAGTGGTGGTTACTGTGCTCATGGGTATCTCCTCTCTCGTGTTCT
ACGTTCTAGGTGCTCGGGTCCCTATCATGATCGAGTCCTTCATCAAGGCG
ACTCCAACTCTCCCTTGGCCTGAGCCATCGCCCACCTCGTCGGTGGCGCC
CATTCCCACTGTCGTTCCCGGCAGTGATCCCATCTTCCAGGTGCTCCATG
ACACCGGGAAACGGACACTATGTACCCTCAACGTTGACGGATTTTGGTCC
CACGGCCTGGGTAACGAGGGCGCTATTCGCATCAGCGAAGAAGACGGAGC
ATAAGGCCCTCGCTGCTGGAGCTTTGGCGCTGAAAATCAACGTTGATGTC
GAGACCATCCTCTTTGCCATCTACGATATCTTCTCCCAGGGTATTCTCGG
TTATTGGCTGCTCATTGCGCATGACGGCGCTCCTGGAATACTAAACGCGT
GTTCCACGTTCTCGTTGCTCTCGCCAGCACCATCTCCTTTATCATCTACC
TCGCTCTGGCGACAGGACAAGGCATGGACTGGAAGCTCGACATCATCAAG
GAGCACAACAAGCATGTCCCCAACACCACGCAGGAATACTACCGTCAAAT
TCTCTGGCTCCGCTATGTCCTTTGGTTCTTGACGGAGCCTTTGGGTCTCA
TCAGCTTGTCGCTGCTCTCCGGTCTGCCTGGCGCCCACCTACTCATCGCC
ATCGCGGCCGACTTTATCATGCTGGGCTCGGGCATTCTGGGCACCTATGC
CGGCCATTCCTCGCGCAGATGGGTCTGGTTCACTATTAGCGCAATCGGAT
ATCTTACAACAGTCTACCATATCAGTGTCCATGGAAGCCGGGCAGCGAGC
AACAAGGATGTCCAGACCAAGCGGTTCTTCGGAACTCTGTCGGGCGTCAT
GTTGTTTGTCAAGCTCTTGTACCCAGTGGTGGTTACTGTGCTCATGGGTA
TCTCCTCTCTCGTGTTCTACGTTCTAGGTGCTCGGGTCCCTATCATGATC
GAGTCCTTCATCAAGGCGACTCCAACTCTCCCTTGGCCTGAGCCATCGCC
CACCTCGTCGGTGGCGCCCATTCCCACTGTCGTTCCCGGCAGTGATCCCA
TCTTCCAGGTGCTCCATGACACCGGGAAACGGACACTATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007516CBS51388_007516Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007516-T1CBS51388_007516-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007516-T1.cdsCBS51388_007516-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007516-T1.exon5CBS51388_007516-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_007516-T1.exon4CBS51388_007516-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007516-T1.exon3CBS51388_007516-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007516-T1.exon2CBS51388_007516-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007516-T1.exon1CBS51388_007516-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR001425
DBxrefPFAM:PF01036
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:396669..397821 -
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