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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:418224..419122- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007525-T1 ID=CBS51388_007525-T1|Name=CBS51388_007525-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=899bp|location=Sequence derived from alignment at An12:418224..419122- (Aspergillus niger CBS 513.88)
ATGGCAGACTCTACCACAGACCAACCCCAACAACCCGAACAGCAACAGCA
GCAGCAGCAATCCAACCCTTTCATCAACATCTTCACCACCTTCCGCGACG
AACTCGACGAGCACCACGACCGTCGCGAACGCATAATAAAAGCCAGTCGC
GACATCACCGCCCTCAGCAAGAAGATCATCTTTGCGTTGCAGCGGTAATC
CCCTCCCCTACCCTTACCCACCATCTTATCCCCAAAACTAACACAGATGA
TAATAATAGAGTCCGAACCCTGAACACACCCCTCCCCGCCTCTCTAACCA
AAGAAACCACCACCCGCTTCAACCAAATAACCACACACTTCACCTCCCTC
CTCCCAGACCTTCGCCCAGCACCAAACACCCACCGCTACATGCGGCAACT
CAGCCCCGCGATCCAGGAATTCATCGAAGCGCTATCCTTTCACCACTACC
TTACCACGCAGACACTGATTACCCTCGATGAAGTGAGGAAGCATCTTCCC
GAAGGAATTCTGGTTACGGAGGAGGATTATCTACTCGGGTTGTTCGATTT
GACTGGGGAGATGATGCGGTTTGCGGTTACGGGGTTGTCTGCTGGCACTT
CTACATCTGATGATGGGGGTGAAGGTGGTGGTGGTGGAGGATTGGGCCAG
GAGCAGAAAGGCATTGTGGTGGATTTGAGGGAAATGAGGTGCGGGTTTGA
GGGGTTGAGTGTGCCGGGGAGACATCGGGGCGTTATGTTGAGGGATATGG
GGAAGAAGGTGGATGTGATGCAGGGGAGTGTGGAGAAGGTGGAACGCGCG
GCGTATGGGATTTTGGTCAGGGGGAGGGAGAGGCCGAAGGGGTGGAGGCC
GGATTTGGTGGTTGGTGGGGGTGGGATGGGTGGTGAGGATGATTATTGA back to topCoding sequence (CDS) from alignment at An12:418224..419122- >CBS51388_007525-T1 ID=CBS51388_007525-T1|Name=CBS51388_007525-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1668bp|location=Sequence derived from alignment at An12:418224..419122- (Aspergillus niger CBS 513.88)
AGTCCGAACCCTGAACACACCCCTCCCCGCCTCTCTAACCAAAGAAACCA
CCACCCGCTTCAACCAAATAACCACACACTTCACCTCCCTCCTCCCAGAC
CTTCGCCCAGCACCAAACACCCACCGCTACATGCGGCAACTCAGCCCCGC
GATCCAGGAATTCATCGAAGCGCTATCCTTTCACCACTACCTTACCACGC
AGACACTGATTACCCTCGATGAAGTGAGGAAGCATCTTCCCGAAGGAATT
CTGGTTACGGAGGAGGATTATCTACTCGGGTTGTTCGATTTGACTGGGGA
GATGATGCGGTTTGCGGTTACGGGGTTGTCTGCTGGCACTTCTACATCTG
ATGATGGGGGTGAAGGTGGTGGTGGTGGAGGATTGGGCCAGGAGCAGAAA
GGCATTGTGGTGGATTTGAGGGAAATGAGGTGCGGGTTTGAGGGGTTGAG
TGTGCCGGGGAGACATCGGGGCGTTATGTTGAGGGATATGGGGAAGAAGG
TGGATGTGATGCAGGGGAGTGTGGAGAAGGTGGAACGCGCGGCGTATGGG
ATTTTGGTCAGGGGGAGGGAGAGGCCGAAGGGGTGGAGGCCGGATTTGGT
GGTTGGTGGGGGTGGGATGGGTGGTGAGGATGATTATTGAATGGCAGACT
CTACCACAGACCAACCCCAACAACCCGAACAGCAACAGCAGCAGCAGCAA
TCCAACCCTTTCATCAACATCTTCACCACCTTCCGCGACGAACTCGACGA
GCACCACGACCGTCGCGAACGCATAATAAAAGCCAGTCGCGACATCACCG
CCCTCAGCAAGAAGATCATCTTTGCGTTGCAGCGAGTCCGAACCCTGAAC
ACACCCCTCCCCGCCTCTCTAACCAAAGAAACCACCACCCGCTTCAACCA
AATAACCACACACTTCACCTCCCTCCTCCCAGACCTTCGCCCAGCACCAA
ACACCCACCGCTACATGCGGCAACTCAGCCCCGCGATCCAGGAATTCATC
GAAGCGCTATCCTTTCACCACTACCTTACCACGCAGACACTGATTACCCT
CGATGAAGTGAGGAAGCATCTTCCCGAAGGAATTCTGGTTACGGAGGAGG
ATTATCTACTCGGGTTGTTCGATTTGACTGGGGAGATGATGCGGTTTGCG
GTTACGGGGTTGTCTGCTGGCACTTCTACATCTGATGATGGGGGTGAAGG
TGGTGGTGGTGGAGGATTGGGCCAGGAGCAGAAAGGCATTGTGGTGGATT
TGAGGGAAATGAGGTGCGGGTTTGAGGGGTTGAGTGTGCCGGGGAGACAT
CGGGGCGTTATGTTGAGGGATATGGGGAAGAAGGTGGATGTGATGCAGGG
GAGTGTGGAGAAGGTGGAACGCGCGGCGTATGGGATTTTGGTCAGGGGGA
GGGAGAGGCCGAAGGGGTGGAGGCCGGATTTGGTGGTTGGTGGGGGTGGG
ATGGGTGGTGAGGATGATTATTGAATGGCAGACTCTACCACAGACCAACC
CCAACAACCCGAACAGCAACAGCAGCAGCAGCAATCCAACCCTTTCATCA
ACATCTTCACCACCTTCCGCGACGAACTCGACGAGCACCACGACCGTCGC
GAACGCATAATAAAAGCCAGTCGCGACATCACCGCCCTCAGCAAGAAGAT
CATCTTTGCGTTGCAGCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043565 | sequence-specific DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036081 |
| DBxref | InterPro:IPR016069 |
| DBxref | InterPro:IPR002848 |
| DBxref | InterPro:IPR016068 |
| DBxref | PFAM:PF01997 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:418224..419122 - |
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