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CBS51388_007528-T1, CBS51388_007528-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007528-T1
Unique NameCBS51388_007528-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:423863..425196-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007528-T1 ID=CBS51388_007528-T1|Name=CBS51388_007528-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1334bp|location=Sequence derived from alignment at An12:423863..425196- (Aspergillus niger CBS 513.88)
ATGGACCGTTTCTTCGGGCATACAAAAGCTCTCTGTCCATTCATCGACGA
GGAAGAGATGCTAGGATATTGTGATTCTTTCTTTGATAGTAGCCAGGAAT
CCCAAGCGACTCCGTATACCTCATTCAGAGATTTCAATGTGTATATGGCA
GCAGCTATTGGGATCCTACTCTCTCCCGACTCGGGTATTGAATTTTTCGC
CAGCAGCTTGCACAGCGCGGCAATGCAGAAGTTTCCCAGCATAATCCAAA
GTAACGATGACATGGGCTTGTTGCATTCCTTGCTGTTGTTGATTATTTAC
TCCATGTTCTCATCGGTGGGGGGATCCACATGGCATCTTGTCGGCTTGGC
CATGAAGAAGGCAATATCGTACGGTTTCCATAAAGAGCCACTCTCTGACC
TCGGCATAGCTGAGGAGAAGCTCACTCGGAGGAGAGGTATATTCTGGAAC
CTGTACATACTTGACAGGTCTGTGCTACTCTGGGCTTTAATATGCAGTGG
CTTATACTCTACAGGACTATTAGCTGCGCAATGGACCGGCCATTCAGTAT
TGAAGATGAAGATATTACGCTTCAGGTATGTCGCAGGTATACTCCAAGGT
GTGTACTAACACCGTTCAAGGTTCCGTCCTATGATGGGGACATCAGTTCA
CCAGACACGCTTGACTTCCCGGCGTACGTTGTCATGCACGCTCGACTGAT
GTCTAAGATGAGAGGCTCTTCACGTCAGCAGTCAATATTCCATTATGGAA
GCCTCTCCTACTGGAGAGATATACCAAGGGGAATACAAAAATCGAGTGTA
GCTCCTGCTTCCTCTAGAGCAATACGGCAGCTCACCTGTAGGGCAATGGT
CTGCCTAGCACAAATCAGTGGGCTTGAGCAAGCCGCAACTAGGGTTCTTG
GGACAACCCATACTATCCGACAAGATGTAATAAACACTTGTAATGATTAT
ATCAATACCGAGTATTTGGCTGTGGAGGACGACTGTTTCACAGGCTCGTT
CGTTGATGCGTTTGACATCTTTTCCGTGGGAGTGGTTCTTATCTGCCTGG
GAAGGACAGAGCTCCCTTCAGAGATGTCGAATGCAACCAGTGTTCTCAAC
AAGTGTACTGCTTTATTGACACTTCTTGGTGAAAGATTTCCGGCGCTCAA
AGCTTTTTGCAGGGTTCTCTGGTGCTTGCAGGAGTCAGCAGACATGGTAA
GCGATAGAAAATCATTTAGCACGACTTACATCAGAACTACAGAACTAAAA
TAACAAGGCACAGATAATTGATGAGCTGCCGGAAATAGTCCCCCATGCTC
TTCAAGTACTGATTGAGGGTGCATTCCGAAGTGA
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Coding sequence (CDS) from alignment at An12:423863..425196-

>CBS51388_007528-T1 ID=CBS51388_007528-T1|Name=CBS51388_007528-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4392bp|location=Sequence derived from alignment at An12:423863..425196- (Aspergillus niger CBS 513.88)
TGAGTTCCGTCCTATGATGGGGACATCAGTTCACCAGACACGCTTGACTT
CCCGGCGTACGTTGTCATGCACGCTCGACTGATGTCTAAGATGAGAGGCT
CTTCACGTCAGCAGTCAATATTCCATTATGGAAGCCTCTCCTACTGGAGA
GATATACCAAGGGGAATACAAAAATCGAGTGTAGCTCCTGCTTCCTCTAG
AGCAATACGGCAGCTCACCTGTAGGGCAATGGTCTGCCTAGCACAAATCA
GTGGGCTTGAGCAAGCCGCAACTAGGGTTCTTGGGACAACCCATACTATC
CGACAAGATGTAATAAACACTTGTAATGATTATATCAATACCGAGTATTT
GGCTGTGGAGGACGACTGTTTCACAGGCTCGTTCGTTGATGCGTTTGACA
TCTTTTCCGTGGGAGTGGTTCTTATCTGCCTGGGAAGGACAGAGCTCCCT
TCAGAGATGTCGAATGCAACCAGTGTTCTCAACAAGTGTACTGCTTTATT
GACACTTCTTGGTGAAAGATTTCCGGCGCTCAAAGCTTTTTGCAGGGTTC
TCTGGTGCTTGCAGGAGTCAGCAGACATGCTGCGCAATGGACCGGCCATT
CAGTATTGAAGATGAAGATATTACGCTTCAGATGGACCGTTTCTTCGGGC
ATACAAAAGCTCTCTGTCCATTCATCGACGAGGAAGAGATGCTAGGATAT
TGTGATTCTTTCTTTGATAGTAGCCAGGAATCCCAAGCGACTCCGTATAC
CTCATTCAGAGATTTCAATGTGTATATGGCAGCAGCTATTGGGATCCTAC
TCTCTCCCGACTCGGGTATTGAATTTTTCGCCAGCAGCTTGCACAGCGCG
GCAATGCAGAAGTTTCCCAGCATAATCCAAAGTAACGATGACATGGGCTT
GTTGCATTCCTTGCTGTTGTTGATTATTTACTCCATGTTCTCATCGGTGG
GGGGATCCACATGGCATCTTGTCGGCTTGGCCATGAAGAAGGCAATATCG
TACGGTTTCCATAAAGAGCCACTCTCTGACCTCGGCATAGCTGAGGAGAA
GCTCACTCGGAGGAGAGGTATATTCTGGAACCTGTACATACTTGACAGTG
AGTTCCGTCCTATGATGGGGACATCAGTTCACCAGACACGCTTGACTTCC
CGGCGTACGTTGTCATGCACGCTCGACTGATGTCTAAGATGAGAGGCTCT
TCACGTCAGCAGTCAATATTCCATTATGGAAGCCTCTCCTACTGGAGAGA
TATACCAAGGGGAATACAAAAATCGAGTGTAGCTCCTGCTTCCTCTAGAG
CAATACGGCAGCTCACCTGTAGGGCAATGGTCTGCCTAGCACAAATCAGT
GGGCTTGAGCAAGCCGCAACTAGGGTTCTTGGGACAACCCATACTATCCG
ACAAGATGTAATAAACACTTGTAATGATTATATCAATACCGAGTATTTGG
CTGTGGAGGACGACTGTTTCACAGGCTCGTTCGTTGATGCGTTTGACATC
TTTTCCGTGGGAGTGGTTCTTATCTGCCTGGGAAGGACAGAGCTCCCTTC
AGAGATGTCGAATGCAACCAGTGTTCTCAACAAGTGTACTGCTTTATTGA
CACTTCTTGGTGAAAGATTTCCGGCGCTCAAAGCTTTTTGCAGGGTTCTC
TGGTGCTTGCAGGAGTCAGCAGACATGCTGCGCAATGGACCGGCCATTCA
GTATTGAAGATGAAGATATTACGCTTCAGATGGACCGTTTCTTCGGGCAT
ACAAAAGCTCTCTGTCCATTCATCGACGAGGAAGAGATGCTAGGATATTG
TGATTCTTTCTTTGATAGTAGCCAGGAATCCCAAGCGACTCCGTATACCT
CATTCAGAGATTTCAATGTGTATATGGCAGCAGCTATTGGGATCCTACTC
TCTCCCGACTCGGGTATTGAATTTTTCGCCAGCAGCTTGCACAGCGCGGC
AATGCAGAAGTTTCCCAGCATAATCCAAAGTAACGATGACATGGGCTTGT
TGCATTCCTTGCTGTTGTTGATTATTTACTCCATGTTCTCATCGGTGGGG
GGATCCACATGGCATCTTGTCGGCTTGGCCATGAAGAAGGCAATATCGTA
CGGTTTCCATAAAGAGCCACTCTCTGACCTCGGCATAGCTGAGGAGAAGC
TCACTCGGAGGAGAGGTATATTCTGGAACCTGTACATACTTGACAGTGAG
TTCCGTCCTATGATGGGGACATCAGTTCACCAGACACGCTTGACTTCCCG
GCGTACGTTGTCATGCACGCTCGACTGATGTCTAAGATGAGAGGCTCTTC
ACGTCAGCAGTCAATATTCCATTATGGAAGCCTCTCCTACTGGAGAGATA
TACCAAGGGGAATACAAAAATCGAGTGTAGCTCCTGCTTCCTCTAGAGCA
ATACGGCAGCTCACCTGTAGGGCAATGGTCTGCCTAGCACAAATCAGTGG
GCTTGAGCAAGCCGCAACTAGGGTTCTTGGGACAACCCATACTATCCGAC
AAGATGTAATAAACACTTGTAATGATTATATCAATACCGAGTATTTGGCT
GTGGAGGACGACTGTTTCACAGGCTCGTTCGTTGATGCGTTTGACATCTT
TTCCGTGGGAGTGGTTCTTATCTGCCTGGGAAGGACAGAGCTCCCTTCAG
AGATGTCGAATGCAACCAGTGTTCTCAACAAGTGTACTGCTTTATTGACA
CTTCTTGGTGAAAGATTTCCGGCGCTCAAAGCTTTTTGCAGGGTTCTCTG
GTGCTTGCAGGAGTCAGCAGACATGCTGCGCAATGGACCGGCCATTCAGT
ATTGAAGATGAAGATATTACGCTTCAGATGGACCGTTTCTTCGGGCATAC
AAAAGCTCTCTGTCCATTCATCGACGAGGAAGAGATGCTAGGATATTGTG
ATTCTTTCTTTGATAGTAGCCAGGAATCCCAAGCGACTCCGTATACCTCA
TTCAGAGATTTCAATGTGTATATGGCAGCAGCTATTGGGATCCTACTCTC
TCCCGACTCGGGTATTGAATTTTTCGCCAGCAGCTTGCACAGCGCGGCAA
TGCAGAAGTTTCCCAGCATAATCCAAAGTAACGATGACATGGGCTTGTTG
CATTCCTTGCTGTTGTTGATTATTTACTCCATGTTCTCATCGGTGGGGGG
ATCCACATGGCATCTTGTCGGCTTGGCCATGAAGAAGGCAATATCGTACG
GTTTCCATAAAGAGCCACTCTCTGACCTCGGCATAGCTGAGGAGAAGCTC
ACTCGGAGGAGAGGTATATTCTGGAACCTGTACATACTTGACAGTGAGTT
CCGTCCTATGATGGGGACATCAGTTCACCAGACACGCTTGACTTCCCGGC
GTACGTTGTCATGCACGCTCGACTGATGTCTAAGATGAGAGGCTCTTCAC
GTCAGCAGTCAATATTCCATTATGGAAGCCTCTCCTACTGGAGAGATATA
CCAAGGGGAATACAAAAATCGAGTGTAGCTCCTGCTTCCTCTAGAGCAAT
ACGGCAGCTCACCTGTAGGGCAATGGTCTGCCTAGCACAAATCAGTGGGC
TTGAGCAAGCCGCAACTAGGGTTCTTGGGACAACCCATACTATCCGACAA
GATGTAATAAACACTTGTAATGATTATATCAATACCGAGTATTTGGCTGT
GGAGGACGACTGTTTCACAGGCTCGTTCGTTGATGCGTTTGACATCTTTT
CCGTGGGAGTGGTTCTTATCTGCCTGGGAAGGACAGAGCTCCCTTCAGAG
ATGTCGAATGCAACCAGTGTTCTCAACAAGTGTACTGCTTTATTGACACT
TCTTGGTGAAAGATTTCCGGCGCTCAAAGCTTTTTGCAGGGTTCTCTGGT
GCTTGCAGGAGTCAGCAGACATGCTGCGCAATGGACCGGCCATTCAGTAT
TGAAGATGAAGATATTACGCTTCAGATGGACCGTTTCTTCGGGCATACAA
AAGCTCTCTGTCCATTCATCGACGAGGAAGAGATGCTAGGATATTGTGAT
TCTTTCTTTGATAGTAGCCAGGAATCCCAAGCGACTCCGTATACCTCATT
CAGAGATTTCAATGTGTATATGGCAGCAGCTATTGGGATCCTACTCTCTC
CCGACTCGGGTATTGAATTTTTCGCCAGCAGCTTGCACAGCGCGGCAATG
CAGAAGTTTCCCAGCATAATCCAAAGTAACGATGACATGGGCTTGTTGCA
TTCCTTGCTGTTGTTGATTATTTACTCCATGTTCTCATCGGTGGGGGGAT
CCACATGGCATCTTGTCGGCTTGGCCATGAAGAAGGCAATATCGTACGGT
TTCCATAAAGAGCCACTCTCTGACCTCGGCATAGCTGAGGAGAAGCTCAC
TCGGAGGAGAGGTATATTCTGGAACCTGTACATACTTGACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007528CBS51388_007528Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007528-T1CBS51388_007528-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007528-T1.cdsCBS51388_007528-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007528-T1.exon4CBS51388_007528-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007528-T1.exon3CBS51388_007528-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007528-T1.exon2CBS51388_007528-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007528-T1.exon1CBS51388_007528-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:423863..425196 -
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