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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:438164..440708- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007535-T1 ID=CBS51388_007535-T1|Name=CBS51388_007535-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2545bp|location=Sequence derived from alignment at An12:438164..440708- (Aspergillus niger CBS 513.88)
ATGTCACTATTGGCCCTACCCACCGAATTATTACAGCAGGTCGCTGCACT
CCTCCCGGATGGACATCTCTCCAGTCTACTGCAGGTGAACCTCCATCTAT
ACGATGTACTGCTTCCATGTCTCTACCAACGGCGTCACAAGTCTCGAGAC
TTTGCACGTAGCTGGCCAGCAGGTTTCATGCGAGCCATTGCGACTGGGAA
TGTCCAAGGCACACAGAACTTCCTCCACTACGGCGCCGACGTGAACCTCG
TATGCAGTCATCACTTTCTGCATCAAGCAAAAGTCCCTATTGAGCCCTGG
TTTGATTTGCAGACGCCGCTTAACGTGGCAGCGAGCATCGGGAATGACAC
GTTGGTAATGATGTTGCTAGGTCACGGGGCTGAAATCAACGGATTGAAGC
ACCATGATGGGGTTCGCTTTAGACACACCCAGCCAGCTATCGCGGATGCT
CTATTATCAGGACATATAAGTACTGTTCGACTCCTGCTTGAACATGGCTC
AGATATCCAAGACTGCCATATAGAGGCTGGTCGGCTAGTCCTCTACGCCG
TTAATACAGGCCAGTTAACGATGCTCCAGCTCCTGAAGGAGTTCGGAGCT
GATCTAAACATCGCTTATAATCACGTGGAACCCCTACACAAGGCAGCCTG
CTTGCGACAAATATCGACTGATATAGTACGGTTCCTGCTTGACCATGGCG
CGGAAATCACCTCTTCTGATCGTCGTCATAGACGGTTTATGGAAGATGTG
ATGAGAGGAGGGACCATCGATACTGCCCGGCTTCTGCTAGAACGCGGAGC
GGTATTTCCCCAGGATGGATTTCATTCGGCTATTGCCTGCGGAACGCCTG
ACTTTATCCGCCTGCTCATTGAATATGGTCACAAGCCTGATATCGAGTGG
CTCAAGTGGGCTATTAGGAGTCGGCGGCTCGATCTATTGCAGCTACTTCT
TGAAGAGGGCGTTGGTCTCTATTCCAGGGACGCTAGAGGATCCACAATCC
TGCATTATGCGGTAAAGTGGTGCAGCTATGAAAGCCCCACACATGGAATG
TCGCAAGCGATATGCGGGATTCCTGCACAGACGCCACTTGTGCGCCGTAT
CAAAAACATCGAGCCTCAAACGGTATCACGTCCATGTAGTATCCAGGGCA
CCTCTAGGGGTACTTCGGAAGACATCCTGCGCTATGTCATTCATAGAGGG
GCGGAGATCAATGCCTTGGATGGTAATGGTCGGACCCCGCTCGATATAGC
TAGGAAATACGCTCCGAAGGTGGAGCAGATACTTGTAGATAGCGGTGCTA
CATCCCATAGCAACTTCCAAGGAGGAAGAGAAAGTGGATAACCGGGTGAA
TTCAATAACTATATTTGGCGAGGCTGATTAGCTTGGATAGGTATCAGCTG
GATCTGTTGGTTAGACAATAGATGTTGGGAGTATGGTTACTCCTTTTTTG
TGGTGCATAGCATACTATATCATGGCCACTGCGTCTTTTCCCAATGACAC
ATGAGACGCCTCTGGTCTGAGACATTGTGTTCCTCGGCATGCTAAGCCTC
TGCCTCAATGCTTGTTCATTCGTGGACTAATAGCTTAACTGCCATGTGAC
GGTTATGGGGCGGTGGCGCGGGAGCTCACGGACCCCTAAACGAAGAAGGC
GTTTCTTAGCATAGTCATAAACCCATGCTGCTGTATAAATCCTACTCTCG
CATAAGACTGGCAACTACCTTACTCCTGATTAGGCCCTAACAAACTAGGG
TACATAAAGCAGAGCCTCCCGGAATATGGTAACACCATCATCCGATCTGA
GGTGAAAGTGAACCATCTTCATGCGACGATCTTGTCCAAAACCAAACACA
CTATTCACAGAAGACTTCTCTATATCTTTCACATGTCTTTCAAACTACTT
GCCCTCTTCTCCGCAACAGTGCTAGCCACACTCAACGACGGCACAAACCT
CGTTACTCCCGTCGTTGAAACCGTGACTACTTATGAGACCGTTACAGGAT
CTCCGGTTACCACAGCTGTAAACAAAACCGTGACTTCATACATTGATCTA
ATTGAATCTTATCTTGTTTCTGAACTGGAGGCCCTGGAGCCAACATACCC
AAGCTGGGTCGAATCTGTTCTTGACACCGCCATCCCGTCAACATGGGCGG
AGAGAATGTCAAGCGATCAGTCATTCTCCAAGTCTGTGGCGGACGTGGCG
GCATCAGGGATCCTGCCAGCCTGGTATTCTAGTCTGCCAAGCGATGTGAA
ATACGTTATGACAAGCGATCAAGCTTTATACAAATCCGAGATCTCTGCTT
TAACTTGGCCTCCCGAGACTTTCGTTACCGGTTCCAGGTCGTTCTTACCT
TCGACGCCGGTATTATCGTCATCTATCTCCTCTTCATCGTCATCCACGGA
GTCAAGTACGTCTGACCCTAGTAATGAAACACAAGCTTCTGAGACGTCTC
CCGTGTCTACTGGGGGTGCGCCCGTCCCTACTGGAAACCTTGTCGTGAGT
ATCGTGGGTGCTGCCGGCGTCCTGGGCCTTGCTCTTGCTTTGTAA back to topCoding sequence (CDS) from alignment at An12:438164..440708- >CBS51388_007535-T1 ID=CBS51388_007535-T1|Name=CBS51388_007535-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4068bp|location=Sequence derived from alignment at An12:438164..440708- (Aspergillus niger CBS 513.88)
GCCCTAACAAACTAGGGTACATAAAGCAGAGCCTCCCGGAATATGGTAAC
ACCATCATCCGATCTGAGGTGAAAGTGAACCATCTTCATGCGACGATCTT
GTCCAAAACCAAACACACTATTCACAGAAGACTTCTCTATATCTTTCACA
TGTCTTTCAAACTACTTGCCCTCTTCTCCGCAACAGTGCTAGCCACACTC
AACGACGGCACAAACCTCGTTACTCCCGTCGTTGAAACCGTGACTACTTA
TGAGACCGTTACAGGATCTCCGGTTACCACAGCTGTAAACAAAACCGTGA
CTTCATACATTGATCTAATTGAATCTTATCTTGTTTCTGAACTGGAGGCC
CTGGAGCCAACATACCCAAGCTGGGTCGAATCTGTTCTTGACACCGCCAT
CCCGTCAACATGGGCGGAGAGAATGTCAAGCGATCAGTCATTCTCCAAGT
CTGTGGCGGACGTGGCGGCATCAGGGATCCTGCCAGCCTGGTATTCTAGT
CTGCCAAGCGATGTGAAATACGTTATGACAAGCGATCAAGCTTTATACAA
ATCCGAGATCTCTGCTTTAACTTGGCCTCCCGAGACTTTCGTTACCGGTT
CCAGGTCGTTCTTACCTTCGACGCCGGTATTATCGTCATCTATCTCCTCT
TCATCGTCATCCACGGAGTCAAGTACGTCTGACCCTAGTAATGAAACACA
AGCTTCTGAGACGTCTCCCGTGTCTACTGGGGGTGCGCCCGTCCCTACTG
GAAACCTTGTCGTGAGTATCGTGGGTGCTGCCGGCGTCCTGGGCCTTGCT
CTTGCTTTGTAAATGTCACTATTGGCCCTACCCACCGAATTATTACAGCA
GGTCGCTGCACTCCTCCCGGATGGACATCTCTCCAGTCTACTGCAGGTGA
ACCTCCATCTATACGATGTACTGCTTCCATGTCTCTACCAACGGCGTCAC
AAGTCTCGAGACTTTGCACGTAGCTGGCCAGCAGGTTTCATGCGAGCCAT
TGCGACTGGGAATGTCCAAGGCACACAGAACTTCCTCCACTACGGCGCCG
ACGTGAACCTCGTATGCAGTCATCACTTTCTGCATCAAGCAAAAGTCCCT
ATTGAGCCCTGGTTTGATTTGCAGACGCCGCTTAACGTGGCAGCGAGCAT
CGGGAATGACACGTTGGTAATGATGTTGCTAGGTCACGGGGCTGAAATCA
ACGGATTGAAGCACCATGATGGGGTTCGCTTTAGACACACCCAGCCAGCT
ATCGCGGATGCTCTATTATCAGGACATATAAGTACTGTTCGACTCCTGCT
TGAACATGGCTCAGATATCCAAGACTGCCATATAGAGGCTGGTCGGCTAG
TCCTCTACGCCGTTAATACAGGCCAGTTAACGATGCTCCAGCTCCTGAAG
GAGTTCGGAGCTGATCTAAACATCGCTTATAATCACGTGGAACCCCTACA
CAAGGCAGCCTGCTTGCGACAAATATCGACTGATATAGTACGGTTCCTGC
TTGACCATGGCGCGGAAATCACCTCTTCTGATCGTCGTCATAGACGGTTT
ATGGAAGATGTGATGAGAGGAGGGACCATCGATACTGCCCGGCTTCTGCT
AGAACGCGGAGCGGTATTTCCCCAGGATGGATTTCATTCGGCTATTGCCT
GCGGAACGCCTGACTTTATCCGCCTGCTCATTGAATATGGTCACAAGCCT
GATATCGAGTGGCTCAAGTGGGCTATTAGGAGTCGGCGGCTCGATCTATT
GCAGCTACTTCTTGAAGAGGGCGTTGGTCTCTATTCCAGGGACGCTAGAG
GATCCACAATCCTGCATTATGCGGTAAAGTGGTGCAGCTATGAAAGCCCC
ACACATGGAATGTCGCAAGCGATATGCGGGATTCCTGCACAGACGCCACT
TGTGCGCCGTATCAAAAACATCGAGCCTCAAACGGTATCACGTCCATGTA
GTATCCAGGGCACCTCTAGGGGTACTTCGGAAGACATCCTGCGCTATGTC
ATTCATAGAGGGGCGGAGATCAATGCCTTGGATGGCCCTAACAAACTAGG
GTACATAAAGCAGAGCCTCCCGGAATATGGTAACACCATCATCCGATCTG
AGGTGAAAGTGAACCATCTTCATGCGACGATCTTGTCCAAAACCAAACAC
ACTATTCACAGAAGACTTCTCTATATCTTTCACATGTCTTTCAAACTACT
TGCCCTCTTCTCCGCAACAGTGCTAGCCACACTCAACGACGGCACAAACC
TCGTTACTCCCGTCGTTGAAACCGTGACTACTTATGAGACCGTTACAGGA
TCTCCGGTTACCACAGCTGTAAACAAAACCGTGACTTCATACATTGATCT
AATTGAATCTTATCTTGTTTCTGAACTGGAGGCCCTGGAGCCAACATACC
CAAGCTGGGTCGAATCTGTTCTTGACACCGCCATCCCGTCAACATGGGCG
GAGAGAATGTCAAGCGATCAGTCATTCTCCAAGTCTGTGGCGGACGTGGC
GGCATCAGGGATCCTGCCAGCCTGGTATTCTAGTCTGCCAAGCGATGTGA
AATACGTTATGACAAGCGATCAAGCTTTATACAAATCCGAGATCTCTGCT
TTAACTTGGCCTCCCGAGACTTTCGTTACCGGTTCCAGGTCGTTCTTACC
TTCGACGCCGGTATTATCGTCATCTATCTCCTCTTCATCGTCATCCACGG
AGTCAAGTACGTCTGACCCTAGTAATGAAACACAAGCTTCTGAGACGTCT
CCCGTGTCTACTGGGGGTGCGCCCGTCCCTACTGGAAACCTTGTCGTGAG
TATCGTGGGTGCTGCCGGCGTCCTGGGCCTTGCTCTTGCTTTGTAAATGT
CACTATTGGCCCTACCCACCGAATTATTACAGCAGGTCGCTGCACTCCTC
CCGGATGGACATCTCTCCAGTCTACTGCAGGTGAACCTCCATCTATACGA
TGTACTGCTTCCATGTCTCTACCAACGGCGTCACAAGTCTCGAGACTTTG
CACGTAGCTGGCCAGCAGGTTTCATGCGAGCCATTGCGACTGGGAATGTC
CAAGGCACACAGAACTTCCTCCACTACGGCGCCGACGTGAACCTCGTATG
CAGTCATCACTTTCTGCATCAAGCAAAAGTCCCTATTGAGCCCTGGTTTG
ATTTGCAGACGCCGCTTAACGTGGCAGCGAGCATCGGGAATGACACGTTG
GTAATGATGTTGCTAGGTCACGGGGCTGAAATCAACGGATTGAAGCACCA
TGATGGGGTTCGCTTTAGACACACCCAGCCAGCTATCGCGGATGCTCTAT
TATCAGGACATATAAGTACTGTTCGACTCCTGCTTGAACATGGCTCAGAT
ATCCAAGACTGCCATATAGAGGCTGGTCGGCTAGTCCTCTACGCCGTTAA
TACAGGCCAGTTAACGATGCTCCAGCTCCTGAAGGAGTTCGGAGCTGATC
TAAACATCGCTTATAATCACGTGGAACCCCTACACAAGGCAGCCTGCTTG
CGACAAATATCGACTGATATAGTACGGTTCCTGCTTGACCATGGCGCGGA
AATCACCTCTTCTGATCGTCGTCATAGACGGTTTATGGAAGATGTGATGA
GAGGAGGGACCATCGATACTGCCCGGCTTCTGCTAGAACGCGGAGCGGTA
TTTCCCCAGGATGGATTTCATTCGGCTATTGCCTGCGGAACGCCTGACTT
TATCCGCCTGCTCATTGAATATGGTCACAAGCCTGATATCGAGTGGCTCA
AGTGGGCTATTAGGAGTCGGCGGCTCGATCTATTGCAGCTACTTCTTGAA
GAGGGCGTTGGTCTCTATTCCAGGGACGCTAGAGGATCCACAATCCTGCA
TTATGCGGTAAAGTGGTGCAGCTATGAAAGCCCCACACATGGAATGTCGC
AAGCGATATGCGGGATTCCTGCACAGACGCCACTTGTGCGCCGTATCAAA
AACATCGAGCCTCAAACGGTATCACGTCCATGTAGTATCCAGGGCACCTC
TAGGGGTACTTCGGAAGACATCCTGCGCTATGTCATTCATAGAGGGGCGG
AGATCAATGCCTTGGATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF12796 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:438164..440708 - |
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