|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:451766..453227+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007538-T1 ID=CBS51388_007538-T1|Name=CBS51388_007538-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1462bp|location=Sequence derived from alignment at An12:451766..453227+ (Aspergillus niger CBS 513.88)
ATGGTGGGTAGCAAATTATCGCTACTTTGTTCCTGCCATTTGCCCTAGAA
TCTTGCTGCTGATTAATATCCAGGACATACTCACCATTCTCAACCAGCAA
AATTTCATATTGGGAACAACTTCGCTTTACTTCGATACGATCCATCCGTG
GATGCCGATCATTTCAAAAAAGCGACTGGACCTCGGCATTTCACTGAAGG
ACGGTGGACCGGACATCGCGCTGCTTTTCCTCGCGATGAAGTTAAACACC
CTCCCTCCGCCACCTGGCAGCGAGATACACGGTGCAATTTATTCGTCTGC
CAAAAGATTCTTGGCGACCTTGGAAGCCAGTGGCGCGGTGTCATTTGGCT
ACCTACAGGCCATGACTTTGATAGCCGTGTACGAATACAGTCACTCGATC
TATCCTGCGGCGTGGATGACCGTAGGAGCATGCGCCCGACTCGCTGAGCT
TCTTGGTATTTCACCTGGTAAAGACACGATGAAAATTATGCGTCCCGCTG
TATGTCGATGAATGATTGAAGAAGACGTAGGAGAAAATCACTGAGTATTT
GACAACAGATGACCTGGACAGAACTAGAGGAGAGAAGACGGGTATGGTGG
GCCATTTACATCTTGGATCGCACTATCTCCCTCGGCAGCCGGAGGAGGTT
CTGCTTCCCAGATCCGGCGGATACAGATGTCCTCCCTGTGGATGATGATA
CATGGGTGAGTACACTCCTGCGCCTTATCTTGTATATCAGATCTCGACTG
ATATTGTCTCCAATAGGATCTGGGTGATGTAGCCAACATCATACATTATC
CAGTCACAACACCCTTTTTCACCCCTGCCTCGCCTTTCTCTCGCCTCTGT
CAGTCGGCAATGTTCATTAGCCGTGCCACCGTGTGTCGAAGCGAATCGAC
GCAGACAGGCCTTGCAGACCATATGACCGCTGTTGTCAGCCTTACCGAGG
ACCTGAGCACCTTCAGCTCTATTCTTGCCGAAGAGATGGACTCTTCCTCC
ACGGACGGATATCTACGACTACTTGCTCCTCAGTGCCTGACGTGGTCGGC
CCTCTTCCTGCTACTCGATAATTATTGCTGCCCAGAAAAACTTAGCAATG
AACCAGGTTACACCACATCCGGCAACACTAAAGGACCGGACGAACTCGCC
GCCCAGATCCAGGCCACGCTGGTAGTGCGGAATATCAGCGACCAGGCCCA
CAGACAAACTACGAACGTCATGGATATTATATCTAACCAGCTACGTAGCG
ACCAAATGGGGAAATTAAGCCCGTTCCTACTGGATGCGCTGTACTGCTCC
ATGGTGACGTTCCAATGGATCTATCGCGAAGGCGGTGACGAGAAAGCCAA
AGGCAAACTAGCTGATATAGAGGCTTGCATGGGGATATTGAGTGGACGGT
GGAAGTTGGCGTCAGAATACATTGCTCTCAATGGAATTTATCGCGACGGA
GGGAACACCTAA back to topCoding sequence (CDS) from alignment at An12:451766..453227+ >CBS51388_007538-T1 ID=CBS51388_007538-T1|Name=CBS51388_007538-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5088bp|location=Sequence derived from alignment at An12:451766..453227+ (Aspergillus niger CBS 513.88)
ATGGACATACTCACCATTCTCAACCAGCAAAATTTCATATTGGGAACAAC
TTCGCTTTACTTCGATACGATCCATCCGTGGATGCCGATCATTTCAAAAA
AGCGACTGGACCTCGGCATTTCACTGAAGGACGGTGGACCGGACATCGCG
CTGCTTTTCCTCGCGATGAAGTTAAACACCCTCCCTCCGCCACCTGGCAG
CGAGATACACGGTGCAATTTATTCGTCTGCCAAAAGATTCTTGGCGACCT
TGGAAGCCAGTGGCGCGGTGTCATTTGGCTACCTACAGGCCATGACTTTG
ATAGCCGTGTACGAATACAGTCACTCGATCTATCCTGCGGCGTGGATGAC
CGTAGGAGCATGCGCCCGACTCGCTGAGCTTCTTGGTATTTCACCTGGTA
AAGACACGATGAAAATTATGCGTCCCGCTATGACCTGGACAGAACTAGAG
GAGAGAAGACGGGTATGGTGGGCCATTTACATCTTGGATCGCACTATCTC
CCTCGGCAGCCGGAGGAGGTTCTGCTTCCCAGATCCGGCGGATACAGATG
TCCTCCCTGTGGATGATGATACATGGGATCTGGGTGATGTAGCCAACATC
ATACATTATCCAGTCACAACACCCTTTTTCACCCCTGCCTCGCCTTTCTC
TCGCCTCTGTCAGTCGGCAATGTTCATTAGCCGTGCCACCGTGTGTCGAA
GCGAATCGACGCAGACAGGCCTTGCAGACCATATGACCGCTGTTGTCAGC
CTTACCGAGGACCTGAGCACCTTCAGCTCTATTCTTGCCGAAGAGATGGA
CTCTTCCTCCACGGACGGATATCTACGACTACTTGCTCCTCAGTGCCTGA
CGTGGTCGGCCCTCTTCCTGCTACTCGATAATTATTGCTGCCCAGAAAAA
CTTAGCAATGAACCAGGTTACACCACATCCGGCAACACTAAAGGACCGGA
CGAACTCGCCGCCCAGATCCAGGCCACGCTGGTAGTGCGGAATATCAGCG
ACCAGGCCCACAGACAAACTACGAACGTCATGGATATTATATCTAACCAG
CTACGTAGCGACCAAATGGGGAAATTAAGCCCGTTCCTACTGGATGCGCT
GTACTGCTCCATGGTGACGTTCCAATGGATCTATCGCGAAGGCGGTGACG
AGAAAGCCAAAGGCAAACTAGCTGATATAGAGGCTTGCATGGGGATATTG
AGTGGACGGTGGAAGTTGGCGTCAGAATACATTGCTCTCAATGGAATTTA
TCGCGACGGAGGGAACACCTAAATGGACATACTCACCATTCTCAACCAGC
AAAATTTCATATTGGGAACAACTTCGCTTTACTTCGATACGATCCATCCG
TGGATGCCGATCATTTCAAAAAAGCGACTGGACCTCGGCATTTCACTGAA
GGACGGTGGACCGGACATCGCGCTGCTTTTCCTCGCGATGAAGTTAAACA
CCCTCCCTCCGCCACCTGGCAGCGAGATACACGGTGCAATTTATTCGTCT
GCCAAAAGATTCTTGGCGACCTTGGAAGCCAGTGGCGCGGTGTCATTTGG
CTACCTACAGGCCATGACTTTGATAGCCGTGTACGAATACAGTCACTCGA
TCTATCCTGCGGCGTGGATGACCGTAGGAGCATGCGCCCGACTCGCTGAG
CTTCTTGGTATTTCACCTGGTAAAGACACGATGAAAATTATGCGTCCCGC
TATGACCTGGACAGAACTAGAGGAGAGAAGACGGGTATGGTGGGCCATTT
ACATCTTGGATCGCACTATCTCCCTCGGCAGCCGGAGGAGGTTCTGCTTC
CCAGATCCGGCGGATACAGATGTCCTCCCTGTGGATGATGATACATGGGA
TCTGGGTGATGTAGCCAACATCATACATTATCCAGTCACAACACCCTTTT
TCACCCCTGCCTCGCCTTTCTCTCGCCTCTGTCAGTCGGCAATGTTCATT
AGCCGTGCCACCGTGTGTCGAAGCGAATCGACGCAGACAGGCCTTGCAGA
CCATATGACCGCTGTTGTCAGCCTTACCGAGGACCTGAGCACCTTCAGCT
CTATTCTTGCCGAAGAGATGGACTCTTCCTCCACGGACGGATATCTACGA
CTACTTGCTCCTCAGTGCCTGACGTGGTCGGCCCTCTTCCTGCTACTCGA
TAATTATTGCTGCCCAGAAAAACTTAGCAATGAACCAGGTTACACCACAT
CCGGCAACACTAAAGGACCGGACGAACTCGCCGCCCAGATCCAGGCCACG
CTGGTAGTGCGGAATATCAGCGACCAGGCCCACAGACAAACTACGAACGT
CATGGATATTATATCTAACCAGCTACGTAGCGACCAAATGGGGAAATTAA
GCCCGTTCCTACTGGATGCGCTGTACTGCTCCATGGTGACGTTCCAATGG
ATCTATCGCGAAGGCGGTGACGAGAAAGCCAAAGGCAAACTAGCTGATAT
AGAGGCTTGCATGGGGATATTGAGTGGACGGTGGAAGTTGGCGTCAGAAT
ACATTGCTCTCAATGGAATTTATCGCGACGGAGGGAACACCTAAATGGAC
ATACTCACCATTCTCAACCAGCAAAATTTCATATTGGGAACAACTTCGCT
TTACTTCGATACGATCCATCCGTGGATGCCGATCATTTCAAAAAAGCGAC
TGGACCTCGGCATTTCACTGAAGGACGGTGGACCGGACATCGCGCTGCTT
TTCCTCGCGATGAAGTTAAACACCCTCCCTCCGCCACCTGGCAGCGAGAT
ACACGGTGCAATTTATTCGTCTGCCAAAAGATTCTTGGCGACCTTGGAAG
CCAGTGGCGCGGTGTCATTTGGCTACCTACAGGCCATGACTTTGATAGCC
GTGTACGAATACAGTCACTCGATCTATCCTGCGGCGTGGATGACCGTAGG
AGCATGCGCCCGACTCGCTGAGCTTCTTGGTATTTCACCTGGTAAAGACA
CGATGAAAATTATGCGTCCCGCTATGACCTGGACAGAACTAGAGGAGAGA
AGACGGGTATGGTGGGCCATTTACATCTTGGATCGCACTATCTCCCTCGG
CAGCCGGAGGAGGTTCTGCTTCCCAGATCCGGCGGATACAGATGTCCTCC
CTGTGGATGATGATACATGGGATCTGGGTGATGTAGCCAACATCATACAT
TATCCAGTCACAACACCCTTTTTCACCCCTGCCTCGCCTTTCTCTCGCCT
CTGTCAGTCGGCAATGTTCATTAGCCGTGCCACCGTGTGTCGAAGCGAAT
CGACGCAGACAGGCCTTGCAGACCATATGACCGCTGTTGTCAGCCTTACC
GAGGACCTGAGCACCTTCAGCTCTATTCTTGCCGAAGAGATGGACTCTTC
CTCCACGGACGGATATCTACGACTACTTGCTCCTCAGTGCCTGACGTGGT
CGGCCCTCTTCCTGCTACTCGATAATTATTGCTGCCCAGAAAAACTTAGC
AATGAACCAGGTTACACCACATCCGGCAACACTAAAGGACCGGACGAACT
CGCCGCCCAGATCCAGGCCACGCTGGTAGTGCGGAATATCAGCGACCAGG
CCCACAGACAAACTACGAACGTCATGGATATTATATCTAACCAGCTACGT
AGCGACCAAATGGGGAAATTAAGCCCGTTCCTACTGGATGCGCTGTACTG
CTCCATGGTGACGTTCCAATGGATCTATCGCGAAGGCGGTGACGAGAAAG
CCAAAGGCAAACTAGCTGATATAGAGGCTTGCATGGGGATATTGAGTGGA
CGGTGGAAGTTGGCGTCAGAATACATTGCTCTCAATGGAATTTATCGCGA
CGGAGGGAACACCTAAATGGACATACTCACCATTCTCAACCAGCAAAATT
TCATATTGGGAACAACTTCGCTTTACTTCGATACGATCCATCCGTGGATG
CCGATCATTTCAAAAAAGCGACTGGACCTCGGCATTTCACTGAAGGACGG
TGGACCGGACATCGCGCTGCTTTTCCTCGCGATGAAGTTAAACACCCTCC
CTCCGCCACCTGGCAGCGAGATACACGGTGCAATTTATTCGTCTGCCAAA
AGATTCTTGGCGACCTTGGAAGCCAGTGGCGCGGTGTCATTTGGCTACCT
ACAGGCCATGACTTTGATAGCCGTGTACGAATACAGTCACTCGATCTATC
CTGCGGCGTGGATGACCGTAGGAGCATGCGCCCGACTCGCTGAGCTTCTT
GGTATTTCACCTGGTAAAGACACGATGAAAATTATGCGTCCCGCTATGAC
CTGGACAGAACTAGAGGAGAGAAGACGGGTATGGTGGGCCATTTACATCT
TGGATCGCACTATCTCCCTCGGCAGCCGGAGGAGGTTCTGCTTCCCAGAT
CCGGCGGATACAGATGTCCTCCCTGTGGATGATGATACATGGGATCTGGG
TGATGTAGCCAACATCATACATTATCCAGTCACAACACCCTTTTTCACCC
CTGCCTCGCCTTTCTCTCGCCTCTGTCAGTCGGCAATGTTCATTAGCCGT
GCCACCGTGTGTCGAAGCGAATCGACGCAGACAGGCCTTGCAGACCATAT
GACCGCTGTTGTCAGCCTTACCGAGGACCTGAGCACCTTCAGCTCTATTC
TTGCCGAAGAGATGGACTCTTCCTCCACGGACGGATATCTACGACTACTT
GCTCCTCAGTGCCTGACGTGGTCGGCCCTCTTCCTGCTACTCGATAATTA
TTGCTGCCCAGAAAAACTTAGCAATGAACCAGGTTACACCACATCCGGCA
ACACTAAAGGACCGGACGAACTCGCCGCCCAGATCCAGGCCACGCTGGTA
GTGCGGAATATCAGCGACCAGGCCCACAGACAAACTACGAACGTCATGGA
TATTATATCTAACCAGCTACGTAGCGACCAAATGGGGAAATTAAGCCCGT
TCCTACTGGATGCGCTGTACTGCTCCATGGTGACGTTCCAATGGATCTAT
CGCGAAGGCGGTGACGAGAAAGCCAAAGGCAAACTAGCTGATATAGAGGC
TTGCATGGGGATATTGAGTGGACGGTGGAAGTTGGCGTCAGAATACATTG
CTCTCAATGGAATTTATCGCGACGGAGGGAACACCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:451766..453227 + |
|
