|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:474736..475416+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007545-T1 ID=CBS51388_007545-T1|Name=CBS51388_007545-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=681bp|location=Sequence derived from alignment at An12:474736..475416+ (Aspergillus niger CBS 513.88)
ATGAACCAACTAGCAGCAAAGCTAGGCCTATCTCCGGAGCTCCAATTCTA
CGACGTCTATTCCCTAGATGACCCATCACAGCTTACACACATCCCCCGAC
CTGCTCTGGCACTCTTAGTCATTATCCCACTTACACCAGCCTGGGACCAA
AGCCGCAAGGCCGAAGACGCTAACAAAGAAGAACCCTACCCTGGCTCCGG
CCGTCCTGACGAGCCAGTCATCTGGTTCAAGCAGACCATCGGCCATGCTT
GCGGATCGATCGGGCTATTACATAGTGTGATCAACGGTCCGGCTGTCGAC
TTCATCACACCTGGGTCCGATCTTGAGACGATACGGAACCTCGCCATACC
GCTGGATATGAACAAACGCGCTAAAATGCTCTATAATAATGAAGCGTTTG
AAGTTGCTCATAAGTCAGTTGAGCAGACGGGCGAAAGCGATGCCAATCTA
ATGGATGAGCGTGATGGTGGGCATTTCGTTAGTTTCGTCAAGAGCGGCGG
GAAGCTCTGGGAGCTGGAGGGGTCGAGGAAGGGGCCTCTGGAGAGGGGAG
ACCTTGCTGAGAATGAGGATGTTCTTAGTCCGCGGGCGCTTGATATGGGC
ATCAGGAGGATCATCAAGCTGAATGCGGATGAAGGGGGTAGTCTGCTTTT
TAGTTGCATTGCTCTGGCGCGTAAGGCATAG back to topCoding sequence (CDS) from alignment at An12:474736..475416+ >CBS51388_007545-T1 ID=CBS51388_007545-T1|Name=CBS51388_007545-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=681bp|location=Sequence derived from alignment at An12:474736..475416+ (Aspergillus niger CBS 513.88)
ATGAACCAACTAGCAGCAAAGCTAGGCCTATCTCCGGAGCTCCAATTCTA
CGACGTCTATTCCCTAGATGACCCATCACAGCTTACACACATCCCCCGAC
CTGCTCTGGCACTCTTAGTCATTATCCCACTTACACCAGCCTGGGACCAA
AGCCGCAAGGCCGAAGACGCTAACAAAGAAGAACCCTACCCTGGCTCCGG
CCGTCCTGACGAGCCAGTCATCTGGTTCAAGCAGACCATCGGCCATGCTT
GCGGATCGATCGGGCTATTACATAGTGTGATCAACGGTCCGGCTGTCGAC
TTCATCACACCTGGGTCCGATCTTGAGACGATACGGAACCTCGCCATACC
GCTGGATATGAACAAACGCGCTAAAATGCTCTATAATAATGAAGCGTTTG
AAGTTGCTCATAAGTCAGTTGAGCAGACGGGCGAAAGCGATGCCAATCTA
ATGGATGAGCGTGATGGTGGGCATTTCGTTAGTTTCGTCAAGAGCGGCGG
GAAGCTCTGGGAGCTGGAGGGGTCGAGGAAGGGGCCTCTGGAGAGGGGAG
ACCTTGCTGAGAATGAGGATGTTCTTAGTCCGCGGGCGCTTGATATGGGC
ATCAGGAGGATCATCAAGCTGAATGCGGATGAAGGGGGTAGTCTGCTTTT
TAGTTGCATTGCTCTGGCGCGTAAGGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006511 | ubiquitin-dependent protein catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004843 | thiol-dependent ubiquitin-specific protease activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0000836 |
| DBxref | InterPro:IPR038765 |
| DBxref | InterPro:IPR036959 |
| DBxref | InterPro:IPR001578 |
| DBxref | PFAM:PF01088 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:474736..475416 + |
|
