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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:478510..479709- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007546-T1 ID=CBS51388_007546-T1|Name=CBS51388_007546-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1200bp|location=Sequence derived from alignment at An12:478510..479709- (Aspergillus niger CBS 513.88)
ATGGATTCCAGCTTAAGCATTCCGGTCAAAGATGAGTCCCTTAGCCATAC
TCTTTACGAAGCAAGTAGCCCATACCTTACCACCCATCAGCAGGGGCCCA
CCCAGGGTGATCTGACGGACAGTGTCGTCCGCAACAACGACAACCGCAAC
TTCATCAGCAGCCTCTCGACGAAAAGCCCTTTCCATCTAGCATCATCCGA
AGATCGCTCCACACAAAGTGCCCCTCTTGGATCGGATCAACGACATACAG
ATAGCCCGCTCTTTGCTAAGCCAGAGGTCTTCTATGAAGTGACTGGGAGT
GACCGCTATGTTGCTCAGCCCATACTCGATGCAAAGCTTCGTAAAGGCTT
CTTCGAAGTCAACGGCAAATGGACTTTGTACCATCGCAACTACTTTTCAG
TTGAGTGTGCCGTTTCCTTTCCTCGGGATATCGAAAATGGGCTGTACATA
CAGCGCGGTAGAGCAGAACTTCAGCAAATCCACGGCTTTTCGGTGAAACT
TTTGGCGAGCAAGGATGGTGAAATCCGTGAATTGGTACAGCACACACCTA
AAAGAGTTCGAAAGAGGGAAGCCGCATCGGAAGAGATAATTTGGTTCCCA
CTCATCGCCAATGCAACTGGTAGAGAGGCAGCGGACCGATCTGAAGAAGT
CAATATCCCCCGCAACGTCAAGTCGTCCAATAATAACGCAGGAGAAAGCA
GACTATTCTCTCACACTTTCGAGAGAATACAGTTTGAGAAGGCTACGCCA
GACAATATCAAAAGACGCTCACAGAAGCAACACTTTAATCTCGTGATTGA
GCTTAATGCCCAGATCTCGGGCGGGGAGCCCGATCGAAACTTGCACTGGC
TGAGGATTGCCCGACAAACCTCAGAACCATTCATCATACGTGGTCAACCC
GCAGGTCATTGCAAGGGGGGAAGAAGGGGTGATCACACTTCCATTTTTTA
TGGTGGTGATGGCATGCGTCGAGGTAGTCTCACAGCGTCACGTCCGTTTC
TGAGAGATTTTGAGTGGCGTACAGACCGTAGGACCAACGCTGAAGAGAGC
AATCATCATCCGCCTACTGCTCAGCGGCTCCGTGGACGCCAACGCGCAGG
ACAAAAACGGCTATACAGTGCTGGCAGTGGCCCCCAGGGCAAGGTATACA
GTAATCTTGCATCTGCTGCGCGACGCGCACGTGGAGGTGAGTTGGGATGA
back to topCoding sequence (CDS) from alignment at An12:478510..479709- >CBS51388_007546-T1 ID=CBS51388_007546-T1|Name=CBS51388_007546-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1200bp|location=Sequence derived from alignment at An12:478510..479709- (Aspergillus niger CBS 513.88)
ATGGATTCCAGCTTAAGCATTCCGGTCAAAGATGAGTCCCTTAGCCATAC
TCTTTACGAAGCAAGTAGCCCATACCTTACCACCCATCAGCAGGGGCCCA
CCCAGGGTGATCTGACGGACAGTGTCGTCCGCAACAACGACAACCGCAAC
TTCATCAGCAGCCTCTCGACGAAAAGCCCTTTCCATCTAGCATCATCCGA
AGATCGCTCCACACAAAGTGCCCCTCTTGGATCGGATCAACGACATACAG
ATAGCCCGCTCTTTGCTAAGCCAGAGGTCTTCTATGAAGTGACTGGGAGT
GACCGCTATGTTGCTCAGCCCATACTCGATGCAAAGCTTCGTAAAGGCTT
CTTCGAAGTCAACGGCAAATGGACTTTGTACCATCGCAACTACTTTTCAG
TTGAGTGTGCCGTTTCCTTTCCTCGGGATATCGAAAATGGGCTGTACATA
CAGCGCGGTAGAGCAGAACTTCAGCAAATCCACGGCTTTTCGGTGAAACT
TTTGGCGAGCAAGGATGGTGAAATCCGTGAATTGGTACAGCACACACCTA
AAAGAGTTCGAAAGAGGGAAGCCGCATCGGAAGAGATAATTTGGTTCCCA
CTCATCGCCAATGCAACTGGTAGAGAGGCAGCGGACCGATCTGAAGAAGT
CAATATCCCCCGCAACGTCAAGTCGTCCAATAATAACGCAGGAGAAAGCA
GACTATTCTCTCACACTTTCGAGAGAATACAGTTTGAGAAGGCTACGCCA
GACAATATCAAAAGACGCTCACAGAAGCAACACTTTAATCTCGTGATTGA
GCTTAATGCCCAGATCTCGGGCGGGGAGCCCGATCGAAACTTGCACTGGC
TGAGGATTGCCCGACAAACCTCAGAACCATTCATCATACGTGGTCAACCC
GCAGGTCATTGCAAGGGGGGAAGAAGGGGTGATCACACTTCCATTTTTTA
TGGTGGTGATGGCATGCGTCGAGGTAGTCTCACAGCGTCACGTCCGTTTC
TGAGAGATTTTGAGTGGCGTACAGACCGTAGGACCAACGCTGAAGAGAGC
AATCATCATCCGCCTACTGCTCAGCGGCTCCGTGGACGCCAACGCGCAGG
ACAAAAACGGCTATACAGTGCTGGCAGTGGCCCCCAGGGCAAGGTATACA
GTAATCTTGCATCTGCTGCGCGACGCGCACGTGGAGGTGAGTTGGGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003700 | DNA-binding transcription factor activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008967 |
| DBxref | InterPro:IPR037141 |
| DBxref | InterPro:IPR024061 |
| DBxref | PFAM:PF05224 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:478510..479709 - |
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