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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:486311..488484+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007548-T1 ID=CBS51388_007548-T1|Name=CBS51388_007548-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2174bp|location=Sequence derived from alignment at An12:486311..488484+ (Aspergillus niger CBS 513.88)
ATGTATCGATCAAGCAGGCATGTGGAGAAACTGTCGACCACACTCGATGA
ATTCAGGGGAGTGCTTGACAAGCTCTTCCCTGGCATTCCAGCGGAGACCC
TGGTCAACTTGCCTCGGGACAAGCTTCTGGAGCTGACAGGCAAGGGGCCT
TCCCAGATGCAGACGCAAGCGCCACACCCGGCATCCCCAGCAACCTCGGC
ATCGGTAGAGGCTCACGCATCGCCAGCATCCAGCGAAGACGGCAATCTCG
AGTCTCTACAGACAATACCTGATCACACAACTGATGATCGTGAATTGAAA
GGTTCTGAGCTAACGAGTACCGTATCCGACGACGTTAACGCTTTATCTCT
CTCGGCCAAACAGCCATCTTCCTATTTGGGTGTCTCTTCCATCCATGCTG
TGCTAAAGGTAATAGTATGGCTGGAGCCGAGCTCTCTCTCTCATTTGTCT
CGCGCACCCGCCACAGGAGTCCGTCGAGAATCTGTCATGGACATTGCATC
TCCAGAGGCCCAGGCCTGGCAGGTTTTTGGGTCACAGCCCCATCATGGCA
CGTCCACCCATAGCCCACTCCAGGTTCCCGAGACTCAACTGCTCGATGCT
TACTTCACCTACTTCCAACCTTTTGTTCCAATGCTGGACGAACAATATTT
TCGCCAAACGTATCTTTCTGCGCGCAGGAAAGACAAGCAATGGCTCGCGT
TACTTAACATTGTCTTTGCTTTGGGCAGCATAGCAGCCACCCCGGCCGAC
GACATGTCCCATCAAGCATATTATATGCGGTCTATGAGCCATTTGAATTT
GGAAAGCCTTGGATCACCACACGTGGAGACTATCCAAGCTCTGGGCCTCA
TGGGTGGCTATTACCTTCACTATAGCAGCCAACCCAACCTCGCGTACTCC
ATGATGGGAGCCGCGTTGCGCATGGCGGCTGCTCTGGGGCTACATAAGGA
AGTGTCAGATGGCCAGTATGGCAATGGCAGGAATAGGCTATCTTCAGTTG
ACCATAAACGTCGGGTATGGTGGTCTCTTTTCTGTCTGGACACGTGGGGT
GGCATGACCTTGGGACGGCCAAGCATGGGTCGGCTGGGTCCAGCAATCAC
CGTTAAGCTACCACATTACAGAGAAACAGTATGTGATACGTTGTGTGTTG
TAATGGGTCTAACTGACATACTTAGGGCAATGTGCTCGACCTTCTACCAC
TTTTGGAAAATGTTCGCTTTTGCAAGATCGCGACACAGATACAGGAGGTC
CTGGCCGTGGCACCGCTGACAAAACCTCACGAAATGGCACATCTTGATAG
CCAGCTTTTGGAATGGTATGATAACCTTCCTTATATTCTTAAAGACCATG
AGCCATGCTCTGAGTCGATTGCGATCACGAGAACCGTCATGAAGTGGCGC
TATTACAACCAACGCATGCTCTTGTATCGCCCCACCCTGCTCAGCTATGC
CATGCGCCGCGTACCATACATTGTGCTCAGGTCTGAAGAAAGGACGGCAA
TTGAAAGATGTAGGGAGATTGCCGAGGCTACCATACAAGATGTAGCCGCC
AAGGCACAATTCCATCAGATGTCAGGCTGGAACGCAGTATGGCTTATCTT
CCAGGCTGCTATGGTCCCTCTTCTAGGCTTGTTTCTCAATGATGGTACGG
TTGATGATCCAAGAGCGACAGCTGAAGCGTGCCAGGCTCAAGTGGAAACA
ACAATGCTTGTCCTGGAGCGCTTGGAACCTTGGAGTCCAGCCGCCAAATC
AACGCTCGAGGCTGTTTCCCGAATATTTGAGGCTGGTAAACGTGGCCCCA
GCGTCATCGGGGAAGCCCACAGCATTAACAGCGGTAGCTGTGTAACGTCT
ACTGAAGAGACTCTTGGCGCAGTTCCTGGGGTATCTCCGATGCAAGTCGA
CTTTGGTCGCGCTATTCCACACGACAGTGGATTTGTCGACCCATTTGAAC
CCCAGTTTATCAATGATTCTGCTGGACAGTATCTATGGGACTTTCTTAGT
TGGAGCGATAGCAACTTGTTGCAGGGTTTGGCTGATATTGACAATGTCAA
CAATGGACCACTGTTTCCCCAGGAGGAGAGAAATGCAAAGTATGGATCCA
GCGACACTGCGTTTTTTGGAGGCCAATTGGGAGATTCAACATTTTTTATC
AATTCAGGGCCGTCCTTCTACTAG back to topCoding sequence (CDS) from alignment at An12:486311..488484+ >CBS51388_007548-T1 ID=CBS51388_007548-T1|Name=CBS51388_007548-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4254bp|location=Sequence derived from alignment at An12:486311..488484+ (Aspergillus niger CBS 513.88)
ATGTATCGATCAAGCAGGCATGTGGAGAAACTGTCGACCACACTCGATGA
ATTCAGGGGAGTGCTTGACAAGCTCTTCCCTGGCATTCCAGCGGAGACCC
TGGTCAACTTGCCTCGGGACAAGCTTCTGGAGCTGACAGGCAAGGGGCCT
TCCCAGATGCAGACGCAAGCGCCACACCCGGCATCCCCAGCAACCTCGGC
ATCGGTAGAGGCTCACGCATCGCCAGCATCCAGCGAAGACGGCAATCTCG
AGTCTCTACAGACAATACCTGATCACACAACTGATGATCGTGAATTGAAA
GGTTCTGAGCTAACGAGTACCGTATCCGACGACGTTAACGCTTTATCTCT
CTCGGCCAAACAGCCATCTTCCTATTTGGGTGTCTCTTCCATCCATGCTG
TGCTAAAGGTAATAGTATGGCTGGAGCCGAGCTCTCTCTCTCATTTGTCT
CGCGCACCCGCCACAGGAGTCCGTCGAGAATCTGTCATGGACATTGCATC
TCCAGAGGCCCAGGCCTGGCAGGTTTTTGGGTCACAGCCCCATCATGGCA
CGTCCACCCATAGCCCACTCCAGGTTCCCGAGACTCAACTGCTCGATGCT
TACTTCACCTACTTCCAACCTTTTGTTCCAATGCTGGACGAACAATATTT
TCGCCAAACGTATCTTTCTGCGCGCAGGAAAGACAAGCAATGGCTCGCGT
TACTTAACATTGTCTTTGCTTTGGGCAGCATAGCAGCCACCCCGGCCGAC
GACATGTCCCATCAAGCATATTATATGCGGTCTATGAGCCATTTGAATTT
GGAAAGCCTTGGATCACCACACGTGGAGACTATCCAAGCTCTGGGCCTCA
TGGGTGGCTATTACCTTCACTATAGCAGCCAACCCAACCTCGCGTACTCC
ATGATGGGAGCCGCGTTGCGCATGGCGGCTGCTCTGGGGCTACATAAGGA
AGTGTCAGATGGCCAGTATGGCAATGGCAGGAATAGGCTATCTTCAGTTG
ACCATAAACGTCGGGTATGGTGGTCTCTTTTCTGTCTGGACACGTGGGGT
GGCATGACCTTGGGACGGCCAAGCATGGGTCGGCTGGGTCCAGCAATCAC
CGTTAAGCTACCACATTACAGAGAAACAGGCAATGTGCTCGACCTTCTAC
CACTTTTGGAAAATGTTCGCTTTTGCAAGATCGCGACACAGATACAGGAG
GTCCTGGCCGTGGCACCGCTGACAAAACCTCACGAAATGGCACATCTTGA
TAGCCAGCTTTTGGAATGGTATGATAACCTTCCTTATATTCTTAAAGACC
ATGAGCCATGCTCTGAGTCGATTGCGATCACGAGAACCGTCATGAAGTGG
CGCTATTACAACCAACGCATGCTCTTGTATCGCCCCACCCTGCTCAGCTA
TGCCATGCGCCGCGTACCATACATTGTGCTCAGGTCTGAAGAAAGGACGG
CAATTGAAAGATGTAGGGAGATTGCCGAGGCTACCATACAAGATGTAGCC
GCCAAGGCACAATTCCATCAGATGTCAGGCTGGAACGCAGTATGGCTTAT
CTTCCAGGCTGCTATGGTCCCTCTTCTAGGCTTGTTTCTCAATGATGGTA
CGGTTGATGATCCAAGAGCGACAGCTGAAGCGTGCCAGGCTCAAGTGGAA
ACAACAATGCTTGTCCTGGAGCGCTTGGAACCTTGGAGTCCAGCCGCCAA
ATCAACGCTCGAGGCTGTTTCCCGAATATTTGAGGCTGGTAAACGTGGCC
CCAGCGTCATCGGGGAAGCCCACAGCATTAACAGCGGTAGCTGTGTAACG
TCTACTGAAGAGACTCTTGGCGCAGTTCCTGGGGTATCTCCGATGCAAGT
CGACTTTGGTCGCGCTATTCCACACGACAGTGGATTTGTCGACCCATTTG
AACCCCAGTTTATCAATGATTCTGCTGGACAGTATCTATGGGACTTTCTT
AGTTGGAGCGATAGCAACTTGTTGCAGGGTTTGGCTGATATTGACAATGT
CAACAATGGACCACTGTTTCCCCAGGAGGAGAGAAATGCAAAGTATGGAT
CCAGCGACACTGCGTTTTTTGGAGGCCAATTGGGAGATTCAACATTTTTT
ATCAATTCAGGGCCGTCCTTCTACTAGATGTATCGATCAAGCAGGCATGT
GGAGAAACTGTCGACCACACTCGATGAATTCAGGGGAGTGCTTGACAAGC
TCTTCCCTGGCATTCCAGCGGAGACCCTGGTCAACTTGCCTCGGGACAAG
CTTCTGGAGCTGACAGGCAAGGGGCCTTCCCAGATGCAGACGCAAGCGCC
ACACCCGGCATCCCCAGCAACCTCGGCATCGGTAGAGGCTCACGCATCGC
CAGCATCCAGCGAAGACGGCAATCTCGAGTCTCTACAGACAATACCTGAT
CACACAACTGATGATCGTGAATTGAAAGGTTCTGAGCTAACGAGTACCGT
ATCCGACGACGTTAACGCTTTATCTCTCTCGGCCAAACAGCCATCTTCCT
ATTTGGGTGTCTCTTCCATCCATGCTGTGCTAAAGGTAATAGTATGGCTG
GAGCCGAGCTCTCTCTCTCATTTGTCTCGCGCACCCGCCACAGGAGTCCG
TCGAGAATCTGTCATGGACATTGCATCTCCAGAGGCCCAGGCCTGGCAGG
TTTTTGGGTCACAGCCCCATCATGGCACGTCCACCCATAGCCCACTCCAG
GTTCCCGAGACTCAACTGCTCGATGCTTACTTCACCTACTTCCAACCTTT
TGTTCCAATGCTGGACGAACAATATTTTCGCCAAACGTATCTTTCTGCGC
GCAGGAAAGACAAGCAATGGCTCGCGTTACTTAACATTGTCTTTGCTTTG
GGCAGCATAGCAGCCACCCCGGCCGACGACATGTCCCATCAAGCATATTA
TATGCGGTCTATGAGCCATTTGAATTTGGAAAGCCTTGGATCACCACACG
TGGAGACTATCCAAGCTCTGGGCCTCATGGGTGGCTATTACCTTCACTAT
AGCAGCCAACCCAACCTCGCGTACTCCATGATGGGAGCCGCGTTGCGCAT
GGCGGCTGCTCTGGGGCTACATAAGGAAGTGTCAGATGGCCAGTATGGCA
ATGGCAGGAATAGGCTATCTTCAGTTGACCATAAACGTCGGGTATGGTGG
TCTCTTTTCTGTCTGGACACGTGGGGTGGCATGACCTTGGGACGGCCAAG
CATGGGTCGGCTGGGTCCAGCAATCACCGTTAAGCTACCACATTACAGAG
AAACAGGCAATGTGCTCGACCTTCTACCACTTTTGGAAAATGTTCGCTTT
TGCAAGATCGCGACACAGATACAGGAGGTCCTGGCCGTGGCACCGCTGAC
AAAACCTCACGAAATGGCACATCTTGATAGCCAGCTTTTGGAATGGTATG
ATAACCTTCCTTATATTCTTAAAGACCATGAGCCATGCTCTGAGTCGATT
GCGATCACGAGAACCGTCATGAAGTGGCGCTATTACAACCAACGCATGCT
CTTGTATCGCCCCACCCTGCTCAGCTATGCCATGCGCCGCGTACCATACA
TTGTGCTCAGGTCTGAAGAAAGGACGGCAATTGAAAGATGTAGGGAGATT
GCCGAGGCTACCATACAAGATGTAGCCGCCAAGGCACAATTCCATCAGAT
GTCAGGCTGGAACGCAGTATGGCTTATCTTCCAGGCTGCTATGGTCCCTC
TTCTAGGCTTGTTTCTCAATGATGGTACGGTTGATGATCCAAGAGCGACA
GCTGAAGCGTGCCAGGCTCAAGTGGAAACAACAATGCTTGTCCTGGAGCG
CTTGGAACCTTGGAGTCCAGCCGCCAAATCAACGCTCGAGGCTGTTTCCC
GAATATTTGAGGCTGGTAAACGTGGCCCCAGCGTCATCGGGGAAGCCCAC
AGCATTAACAGCGGTAGCTGTGTAACGTCTACTGAAGAGACTCTTGGCGC
AGTTCCTGGGGTATCTCCGATGCAAGTCGACTTTGGTCGCGCTATTCCAC
ACGACAGTGGATTTGTCGACCCATTTGAACCCCAGTTTATCAATGATTCT
GCTGGACAGTATCTATGGGACTTTCTTAGTTGGAGCGATAGCAACTTGTT
GCAGGGTTTGGCTGATATTGACAATGTCAACAATGGACCACTGTTTCCCC
AGGAGGAGAGAAATGCAAAGTATGGATCCAGCGACACTGCGTTTTTTGGA
GGCCAATTGGGAGATTCAACATTTTTTATCAATTCAGGGCCGTCCTTCTA
CTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_12.1 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:486311..488484 + |
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