You are here

Home

CBS51388_007557-T1, CBS51388_007557-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007557-T1
Unique NameCBS51388_007557-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:510330..511545-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007557-T1 ID=CBS51388_007557-T1|Name=CBS51388_007557-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1216bp|location=Sequence derived from alignment at An12:510330..511545- (Aspergillus niger CBS 513.88)
ATGGATCAGGTCGGCGGCCTCCTCACCTACGCGATCGGCCAATTAAACAC
CTTCCCCGTATGGCGCGCCGTCTTCCTCATCTGCGGCGGGGCAACCATCA
TCTGGGGAGTAGTGATGATGATATTCCTCCCGAATAGTATCCTCACTAGT
AAGCGGTTCAGCGTTGAGGAGAAGGTGTTGCTCATCGGGAGGGGGCGAAA
GAATCAGACTGTTCGTTCCACCCACTCTTACGCTTCTCATAACACCAATT
ATTATGGTTCTTTCTAACAAGAGAGATACAAATGAATAGGGTATCCTGAA
TCGATCCATAAAATGGTACCAAATCCGAGAAGCCTTCGTCGATCCCCAAG
TGTGGCTATTATTCCTCTTCACATTGTTGAACGAGACGGTGAATGGGGGA
GTAGCTAATGTACATCCCACCTCTCTTTTGACCCCATGTCCTCCCTATTA
AATGCTGTTACTAACACTGAGAGTAATACCAGTTCGGCAAACTCATCATC
AAAGGCCTGGTCAGCAGCTCCCTCCTGACCACCGTCCTGGGTATCCCGCA
AGGCGCATTCCAAGTCCTCTTTATCCTATCCGGAACATACCTCTCTACTC
GCTTCACAAATATCAGGACAATCATCATGATAGCGTACCTCATCCCCACT
GTGATCGGAGTGTGTCTGTTATGGAAGTTACCTCGCGAGAGGGAATACGG
GGTGTTGTTTGGGTATTATATCGTATGCTCCATCTTCTTTCTTTTTTATT
TTCCCTCTCATCTCTGATGAAAGGAGTATTAATGCTAATGATGAATATGA
TAATAGATCGGCTCCTTCGTAACCTCCCTCGTGCTGGCCCTGCAACTCCC
CTCCAGCAACATGGGCGGATACACGAAGCGAGTAACCGCCACGGCATTTG
TGTTCCTGGCCTACTGCATTGGGAATATCATCGGCCCGCATGCGTTCCTG
GCTAGTGAGGCGCCGGTGTATCAGACCGGGTGTAAGTTGATTCTGGGGTG
TGCGTTGTGTCAGATGGTTTGTGCGGGGGTGTTGAGGGTGGTACTTGTTC
GGAGGAATAAGAGGAGGGATGATGCTATGATGGGGGTTGGTGGCGAGGAA
GGGGAGGGGGAGGGGGTGATGGAGGATTTGACGGATTTTGAGGTATGTTT
TTTCTTCCAGCTTTTGTGGGTGTTGGTTTGGGTGTATGCTGATTGGGTGC
AGAATCCGAGGTTTAG
back to top

Coding sequence (CDS) from alignment at An12:510330..511545-

>CBS51388_007557-T1 ID=CBS51388_007557-T1|Name=CBS51388_007557-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4560bp|location=Sequence derived from alignment at An12:510330..511545- (Aspergillus niger CBS 513.88)
GTTTAGATCGGCTCCTTCGTAACCTCCCTCGTGCTGGCCCTGCAACTCCC
CTCCAGCAACATGGGCGGATACACGAAGCGAGTAACCGCCACGGCATTTG
TGTTCCTGGCCTACTGCATTGGGAATATCATCGGCCCGCATGCGTTCCTG
GCTAGTGAGGCGCCGGTGTATCAGACCGGGTGTAAGTTGATTCTGGGGTG
TGCGTTGTGTCAGATGGTTTGTGCGGGGGTGTTGAGGGTGGTACTTGTTC
GGAGGAATAAGAGGAGGGATGATGCTATGATGGGGGTTGGTGGCGAGGAA
GGGGAGGGGGAGGGGGTGATGGAGGATTTGACGGATTTTGAGTTCGGCAA
ACTCATCATCAAAGGCCTGGTCAGCAGCTCCCTCCTGACCACCGTCCTGG
GTATCCCGCAAGGCGCATTCCAAGTCCTCTTTATCCTATCCGGAACATAC
CTCTCTACTCGCTTCACAAATATCAGGACAATCATCATGATAGCGTACCT
CATCCCCACTGTGATCGGAGTGTGTCTGTTATGGAAGTTACCTCGCGAGA
GGGAATACGGGGTGTTGTTTGGGTATTATATCGGTATCCTGAATCGATCC
ATAAAATGGTACCAAATCCGAGAAGCCTTCGTCGATCCCCAAGTGTGGCT
ATTATTCCTCTTCACATTGTTGAACGAGACGGTGAATGGGGGAGTAGCTA
ATATGGATCAGGTCGGCGGCCTCCTCACCTACGCGATCGGCCAATTAAAC
ACCTTCCCCGTATGGCGCGCCGTCTTCCTCATCTGCGGCGGGGCAACCAT
CATCTGGGGAGTAGTGATGATGATATTCCTCCCGAATAGTATCCTCACTA
GTAAGCGGTTCAGCGTTGAGGAGAAGGTGTTGCTCATCGGGAGGGGGCGA
AAGAATCAGACTGTTTAGATCGGCTCCTTCGTAACCTCCCTCGTGCTGGC
CCTGCAACTCCCCTCCAGCAACATGGGCGGATACACGAAGCGAGTAACCG
CCACGGCATTTGTGTTCCTGGCCTACTGCATTGGGAATATCATCGGCCCG
CATGCGTTCCTGGCTAGTGAGGCGCCGGTGTATCAGACCGGGTGTAAGTT
GATTCTGGGGTGTGCGTTGTGTCAGATGGTTTGTGCGGGGGTGTTGAGGG
TGGTACTTGTTCGGAGGAATAAGAGGAGGGATGATGCTATGATGGGGGTT
GGTGGCGAGGAAGGGGAGGGGGAGGGGGTGATGGAGGATTTGACGGATTT
TGAGTTCGGCAAACTCATCATCAAAGGCCTGGTCAGCAGCTCCCTCCTGA
CCACCGTCCTGGGTATCCCGCAAGGCGCATTCCAAGTCCTCTTTATCCTA
TCCGGAACATACCTCTCTACTCGCTTCACAAATATCAGGACAATCATCAT
GATAGCGTACCTCATCCCCACTGTGATCGGAGTGTGTCTGTTATGGAAGT
TACCTCGCGAGAGGGAATACGGGGTGTTGTTTGGGTATTATATCGGTATC
CTGAATCGATCCATAAAATGGTACCAAATCCGAGAAGCCTTCGTCGATCC
CCAAGTGTGGCTATTATTCCTCTTCACATTGTTGAACGAGACGGTGAATG
GGGGAGTAGCTAATATGGATCAGGTCGGCGGCCTCCTCACCTACGCGATC
GGCCAATTAAACACCTTCCCCGTATGGCGCGCCGTCTTCCTCATCTGCGG
CGGGGCAACCATCATCTGGGGAGTAGTGATGATGATATTCCTCCCGAATA
GTATCCTCACTAGTAAGCGGTTCAGCGTTGAGGAGAAGGTGTTGCTCATC
GGGAGGGGGCGAAAGAATCAGACTGTTTAGATCGGCTCCTTCGTAACCTC
CCTCGTGCTGGCCCTGCAACTCCCCTCCAGCAACATGGGCGGATACACGA
AGCGAGTAACCGCCACGGCATTTGTGTTCCTGGCCTACTGCATTGGGAAT
ATCATCGGCCCGCATGCGTTCCTGGCTAGTGAGGCGCCGGTGTATCAGAC
CGGGTGTAAGTTGATTCTGGGGTGTGCGTTGTGTCAGATGGTTTGTGCGG
GGGTGTTGAGGGTGGTACTTGTTCGGAGGAATAAGAGGAGGGATGATGCT
ATGATGGGGGTTGGTGGCGAGGAAGGGGAGGGGGAGGGGGTGATGGAGGA
TTTGACGGATTTTGAGTTCGGCAAACTCATCATCAAAGGCCTGGTCAGCA
GCTCCCTCCTGACCACCGTCCTGGGTATCCCGCAAGGCGCATTCCAAGTC
CTCTTTATCCTATCCGGAACATACCTCTCTACTCGCTTCACAAATATCAG
GACAATCATCATGATAGCGTACCTCATCCCCACTGTGATCGGAGTGTGTC
TGTTATGGAAGTTACCTCGCGAGAGGGAATACGGGGTGTTGTTTGGGTAT
TATATCGGTATCCTGAATCGATCCATAAAATGGTACCAAATCCGAGAAGC
CTTCGTCGATCCCCAAGTGTGGCTATTATTCCTCTTCACATTGTTGAACG
AGACGGTGAATGGGGGAGTAGCTAATATGGATCAGGTCGGCGGCCTCCTC
ACCTACGCGATCGGCCAATTAAACACCTTCCCCGTATGGCGCGCCGTCTT
CCTCATCTGCGGCGGGGCAACCATCATCTGGGGAGTAGTGATGATGATAT
TCCTCCCGAATAGTATCCTCACTAGTAAGCGGTTCAGCGTTGAGGAGAAG
GTGTTGCTCATCGGGAGGGGGCGAAAGAATCAGACTGTTTAGATCGGCTC
CTTCGTAACCTCCCTCGTGCTGGCCCTGCAACTCCCCTCCAGCAACATGG
GCGGATACACGAAGCGAGTAACCGCCACGGCATTTGTGTTCCTGGCCTAC
TGCATTGGGAATATCATCGGCCCGCATGCGTTCCTGGCTAGTGAGGCGCC
GGTGTATCAGACCGGGTGTAAGTTGATTCTGGGGTGTGCGTTGTGTCAGA
TGGTTTGTGCGGGGGTGTTGAGGGTGGTACTTGTTCGGAGGAATAAGAGG
AGGGATGATGCTATGATGGGGGTTGGTGGCGAGGAAGGGGAGGGGGAGGG
GGTGATGGAGGATTTGACGGATTTTGAGTTCGGCAAACTCATCATCAAAG
GCCTGGTCAGCAGCTCCCTCCTGACCACCGTCCTGGGTATCCCGCAAGGC
GCATTCCAAGTCCTCTTTATCCTATCCGGAACATACCTCTCTACTCGCTT
CACAAATATCAGGACAATCATCATGATAGCGTACCTCATCCCCACTGTGA
TCGGAGTGTGTCTGTTATGGAAGTTACCTCGCGAGAGGGAATACGGGGTG
TTGTTTGGGTATTATATCGGTATCCTGAATCGATCCATAAAATGGTACCA
AATCCGAGAAGCCTTCGTCGATCCCCAAGTGTGGCTATTATTCCTCTTCA
CATTGTTGAACGAGACGGTGAATGGGGGAGTAGCTAATATGGATCAGGTC
GGCGGCCTCCTCACCTACGCGATCGGCCAATTAAACACCTTCCCCGTATG
GCGCGCCGTCTTCCTCATCTGCGGCGGGGCAACCATCATCTGGGGAGTAG
TGATGATGATATTCCTCCCGAATAGTATCCTCACTAGTAAGCGGTTCAGC
GTTGAGGAGAAGGTGTTGCTCATCGGGAGGGGGCGAAAGAATCAGACTGT
TTAGATCGGCTCCTTCGTAACCTCCCTCGTGCTGGCCCTGCAACTCCCCT
CCAGCAACATGGGCGGATACACGAAGCGAGTAACCGCCACGGCATTTGTG
TTCCTGGCCTACTGCATTGGGAATATCATCGGCCCGCATGCGTTCCTGGC
TAGTGAGGCGCCGGTGTATCAGACCGGGTGTAAGTTGATTCTGGGGTGTG
CGTTGTGTCAGATGGTTTGTGCGGGGGTGTTGAGGGTGGTACTTGTTCGG
AGGAATAAGAGGAGGGATGATGCTATGATGGGGGTTGGTGGCGAGGAAGG
GGAGGGGGAGGGGGTGATGGAGGATTTGACGGATTTTGAGTTCGGCAAAC
TCATCATCAAAGGCCTGGTCAGCAGCTCCCTCCTGACCACCGTCCTGGGT
ATCCCGCAAGGCGCATTCCAAGTCCTCTTTATCCTATCCGGAACATACCT
CTCTACTCGCTTCACAAATATCAGGACAATCATCATGATAGCGTACCTCA
TCCCCACTGTGATCGGAGTGTGTCTGTTATGGAAGTTACCTCGCGAGAGG
GAATACGGGGTGTTGTTTGGGTATTATATCGGTATCCTGAATCGATCCAT
AAAATGGTACCAAATCCGAGAAGCCTTCGTCGATCCCCAAGTGTGGCTAT
TATTCCTCTTCACATTGTTGAACGAGACGGTGAATGGGGGAGTAGCTAAT
ATGGATCAGGTCGGCGGCCTCCTCACCTACGCGATCGGCCAATTAAACAC
CTTCCCCGTATGGCGCGCCGTCTTCCTCATCTGCGGCGGGGCAACCATCA
TCTGGGGAGTAGTGATGATGATATTCCTCCCGAATAGTATCCTCACTAGT
AAGCGGTTCAGCGTTGAGGAGAAGGTGTTGCTCATCGGGAGGGGGCGAAA
GAATCAGACT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007557CBS51388_007557Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007557-T1CBS51388_007557-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007557-T1.cdsCBS51388_007557-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007557-T1.exon5CBS51388_007557-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_007557-T1.exon4CBS51388_007557-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_007557-T1.exon3CBS51388_007557-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_007557-T1.exon2CBS51388_007557-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_007557-T1.exon1CBS51388_007557-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:510330..511545 -
Powered by Drupal